RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 C18orf25Q96B23 403 aaPredicted RBP12.88□□□□□ -0.35
HPS4-214ENST00000485842 PAAF1Q9BRP4 392 aa12.88□□□□□ -0.35
HPS4-214ENST00000485842 PLEKHA5Q9HAU0 1116 aa12.88□□□□□ -0.35
HPS4-214ENST00000485842 ENTPD7Q9NQZ7 604 aa12.88□□□□□ -0.35
HPS4-214ENST00000485842 TLR9Q9NR96 1032 aa12.88□□□□□ -0.35
HPS4-214ENST00000485842 MARCH5Q9NX47 278 aa12.88□□□□□ -0.35
HPS4-214ENST00000485842 RBAKQ9NYW8 714 aaPredicted RBP12.88□□□□□ -0.35
HPS4-214ENST00000485842 HSPBP1Q9NZL4 362 aa12.88□□□□□ -0.35
HPS4-214ENST00000485842 TUBGCP4Q9UGJ1 667 aa12.88□□□□□ -0.35
HPS4-214ENST00000485842 PUF60Q9UHX1 559 aaKnown RBP12.88□□□□□ -0.35
HPS4-214ENST00000485842 STXBP5LQ9Y2K9 1186 aa12.88□□□□□ -0.35
HPS4-214ENST00000485842 PCDHGC5Q9Y5F6 944 aa12.88□□□□□ -0.35
HPS4-214ENST00000485842 KIAA0391O15091 583 aaKnown RBP12.87□□□□□ -0.35
HPS4-214ENST00000485842 KIF4AO95239 1232 aa12.87□□□□□ -0.35
HPS4-214ENST00000485842 NFICP08651 508 aa12.87□□□□□ -0.35
HPS4-214ENST00000485842 IRS1P35568 1242 aa12.87□□□□□ -0.35
HPS4-214ENST00000485842 UBE3AQ05086 875 aa12.87□□□□□ -0.35
HPS4-214ENST00000485842 CAMK1Q14012 370 aa12.87□□□□□ -0.35
HPS4-214ENST00000485842 TIGD5Q53EQ6 642 aa12.87□□□□□ -0.35
HPS4-214ENST00000485842 ZNF658Q5TYW1 1059 aaPredicted RBP12.87□□□□□ -0.35
HPS4-214ENST00000485842 PLPP4Q5VZY2 271 aa12.87□□□□□ -0.35
HPS4-214ENST00000485842 BRSK2Q8IWQ3 736 aa12.87□□□□□ -0.35
HPS4-214ENST00000485842 TMEM130Q8N3G9 435 aa12.87□□□□□ -0.35
HPS4-214ENST00000485842 GUF1Q8N442 669 aaKnown RBP12.87□□□□□ -0.35
HPS4-214ENST00000485842 GOLGA5Q8TBA6 731 aa12.87□□□□□ -0.35
HPS4-214ENST00000485842 COLEC11Q9BWP8 271 aa12.87□□□□□ -0.35
HPS4-214ENST00000485842 KCTD10Q9H3F6 313 aa12.87□□□□□ -0.35
HPS4-214ENST00000485842 LMCD1Q9NZU5 365 aa12.87□□□□□ -0.35
HPS4-214ENST00000485842 CGNQ9P2M7 1197 aaKnown RBP12.87□□□□□ -0.35
HPS4-214ENST00000485842 MAN1B1Q9UKM7 699 aa12.87□□□□□ -0.35
HPS4-214ENST00000485842 LZTS1Q9Y250 596 aa12.87□□□□□ -0.35
HPS4-214ENST00000485842 PODXLO00592 558 aa12.86□□□□□ -0.35
HPS4-214ENST00000485842 PDXKO00764 312 aa12.86□□□□□ -0.35
HPS4-214ENST00000485842 CALUO43852 315 aaPredicted RBP12.86□□□□□ -0.35
HPS4-214ENST00000485842 TADA2AO75478 443 aa12.86□□□□□ -0.35
HPS4-214ENST00000485842 IL18RAPO95256 599 aa12.86□□□□□ -0.35
HPS4-214ENST00000485842 CLCNKBP51801 687 aa12.86□□□□□ -0.35
HPS4-214ENST00000485842 GUCY2FP51841 1108 aa12.86□□□□□ -0.35
HPS4-214ENST00000485842 WNT7BP56706 349 aa12.86□□□□□ -0.35
HPS4-214ENST00000485842 ERVFC1P60507 584 aa12.86□□□□□ -0.35
HPS4-214ENST00000485842 SNRPFP62306 86 aaKnown RBP12.86□□□□□ -0.35
HPS4-214ENST00000485842 TMEM132DQ14C87 1099 aa12.86□□□□□ -0.35
HPS4-214ENST00000485842 FUT10Q6P4F1 479 aa12.86□□□□□ -0.35
HPS4-214ENST00000485842 TMC7Q7Z402 723 aa12.86□□□□□ -0.35
HPS4-214ENST00000485842 DDX53Q86TM3 631 aaKnown RBP12.86□□□□□ -0.35
HPS4-214ENST00000485842 CBWD2Q8IUF1 395 aa12.86□□□□□ -0.35
HPS4-214ENST00000485842 CD302Q8IX05 232 aa12.86□□□□□ -0.35
HPS4-214ENST00000485842 VPS52Q8N1B4 723 aa12.86□□□□□ -0.35
HPS4-214ENST00000485842 XXYLT1Q8NBI6 393 aa12.86□□□□□ -0.35
HPS4-214ENST00000485842 RDH13Q8NBN7 331 aa12.86□□□□□ -0.35
HPS4-214ENST00000485842 SPATA20Q8TB22 786 aa12.86□□□□□ -0.35
HPS4-214ENST00000485842 UROC1Q96N76 676 aa12.86□□□□□ -0.35
HPS4-214ENST00000485842 TCF25Q9BQ70 676 aa12.86□□□□□ -0.35
HPS4-214ENST00000485842 VN1R3Q9BXE9 311 aa12.86□□□□□ -0.35
HPS4-214ENST00000485842 NUP62CLQ9H1M0 184 aa12.86□□□□□ -0.35
HPS4-214ENST00000485842 CLSTN2Q9H4D0 955 aa12.86□□□□□ -0.35
HPS4-214ENST00000485842 ASB7Q9H672 318 aa12.86□□□□□ -0.35
HPS4-214ENST00000485842 ADAM28Q9UKQ2 775 aa12.86□□□□□ -0.35
HPS4-214ENST00000485842 UBQLN1Q9UMX0 589 aaKnown RBP12.86□□□□□ -0.35
HPS4-214ENST00000485842 MYO7AQ13402 2215 aa12.86□□□□□ -0.35
HPS4-214ENST00000485842 TRANK1O15050 2925 aa12.85□□□□□ -0.35
HPS4-214ENST00000485842 ZNF233A6NK53 670 aa12.85□□□□□ -0.35
HPS4-214ENST00000485842 XPOTO43592 962 aaKnown RBP12.85□□□□□ -0.35
HPS4-214ENST00000485842 EXOC3O60645 756 aa12.85□□□□□ -0.35
HPS4-214ENST00000485842 B3GAT3O94766 335 aa12.85□□□□□ -0.35
HPS4-214ENST00000485842 NR3C1P04150 777 aa12.85□□□□□ -0.35
HPS4-214ENST00000485842 ADRB2P07550 413 aa12.85□□□□□ -0.35
HPS4-214ENST00000485842 POU3F3P20264 500 aaPredicted RBP12.85□□□□□ -0.35
HPS4-214ENST00000485842 PRCPP42785 496 aa12.85□□□□□ -0.35
HPS4-214ENST00000485842 SKIV2LQ15477 1246 aaKnown RBP12.85□□□□□ -0.35
HPS4-214ENST00000485842 SNRNP35Q16560 246 aaKnown RBP12.85□□□□□ -0.35
HPS4-214ENST00000485842 TCEAL5Q5H9L2 206 aa12.85□□□□□ -0.35
HPS4-214ENST00000485842 C12orf56Q8IXR9 622 aa12.85□□□□□ -0.35
HPS4-214ENST00000485842 BEST2Q8NFU1 509 aa12.85□□□□□ -0.35
HPS4-214ENST00000485842 GPT2Q8TD30 523 aa12.85□□□□□ -0.35
HPS4-214ENST00000485842 AUTS2Q8WXX7 1259 aa12.85□□□□□ -0.35
HPS4-214ENST00000485842 ZBP1Q9H171 429 aa12.85□□□□□ -0.35
HPS4-214ENST00000485842 NSUN3Q9H649 340 aaKnown RBP12.85□□□□□ -0.35
HPS4-214ENST00000485842 PDE11AQ9HCR9 933 aa12.85□□□□□ -0.35
HPS4-214ENST00000485842 SF3B1O75533 1304 aaKnown RBP eCLIP12.85□□□□□ -0.35
HPS4-214ENST00000485842 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.84□□□□□ -0.35
HPS4-214ENST00000485842 C2CD2LO14523 706 aa12.84□□□□□ -0.35
HPS4-214ENST00000485842 FSCN2O14926 492 aa12.84□□□□□ -0.35
HPS4-214ENST00000485842 SOD2P04179 222 aa12.84□□□□□ -0.35
HPS4-214ENST00000485842 IGFBP6P24592 240 aaPredicted RBP12.84□□□□□ -0.35
HPS4-214ENST00000485842 BRCC3P46736 316 aa12.84□□□□□ -0.35
HPS4-214ENST00000485842 TFAMQ00059 246 aaKnown RBP12.84□□□□□ -0.35
HPS4-214ENST00000485842 POU5F1Q01860 360 aaKnown RBP12.84□□□□□ -0.35
HPS4-214ENST00000485842 STIM1Q13586 685 aa12.84□□□□□ -0.35
HPS4-214ENST00000485842 SMC1AQ14683 1233 aaKnown RBP12.84□□□□□ -0.35
HPS4-214ENST00000485842 UPP1Q16831 310 aa12.84□□□□□ -0.35
HPS4-214ENST00000485842 LMBRD2Q68DH5 695 aaPredicted RBP12.84□□□□□ -0.35
HPS4-214ENST00000485842 DCLRE1AQ6PJP8 1040 aa12.84□□□□□ -0.35
HPS4-214ENST00000485842 ADGRD2Q7Z7M1 963 aa12.84□□□□□ -0.35
HPS4-214ENST00000485842 EFCAB13Q8IY85 973 aa12.84□□□□□ -0.35
HPS4-214ENST00000485842 C3orf58Q8NDZ4 430 aa12.84□□□□□ -0.35
HPS4-214ENST00000485842 PPP2R3CQ969Q6 453 aa12.84□□□□□ -0.35
HPS4-214ENST00000485842 DDX27Q96GQ7 796 aaKnown RBP12.84□□□□□ -0.35
HPS4-214ENST00000485842 FAM84AQ96KN4 292 aa12.84□□□□□ -0.35
HPS4-214ENST00000485842 B3GALT6Q96L58 329 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms