RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 RNF187Q5TA31 235 aaPredicted RBP5.74□□□□□ -1.49
COMMD3-213ENST00000483684 SPATS2Q86XZ4 545 aaKnown RBP5.74□□□□□ -1.49
COMMD3-213ENST00000483684 TMEM132CQ8N3T6 1108 aa5.74□□□□□ -1.49
COMMD3-213ENST00000483684 ZNF384Q8TF68 577 aa5.74□□□□□ -1.49
COMMD3-213ENST00000483684 SCARB1Q8WTV0 552 aa5.74□□□□□ -1.49
COMMD3-213ENST00000483684 KLHL11Q9NVR0 708 aa5.74□□□□□ -1.49
COMMD3-213ENST00000483684 ATP11BQ9Y2G3 1177 aa5.74□□□□□ -1.49
COMMD3-213ENST00000483684 ARHGEF17Q96PE2 2063 aaPredicted RBP5.74□□□□□ -1.49
COMMD3-213ENST00000483684 DNAJC9-AS1A6NH13 148 aa5.73□□□□□ -1.49
COMMD3-213ENST00000483684 PJA2O43164 708 aa5.73□□□□□ -1.49
COMMD3-213ENST00000483684 PRAMEF4O60810 478 aa5.73□□□□□ -1.49
COMMD3-213ENST00000483684 FLT3LGP49771 235 aa5.73□□□□□ -1.49
COMMD3-213ENST00000483684 CACNA2D1P54289 1103 aa5.73□□□□□ -1.49
COMMD3-213ENST00000483684 RNF219Q5W0B1 726 aaPredicted RBP5.73□□□□□ -1.49
COMMD3-213ENST00000483684 Q6ZNX1 250 aa5.73□□□□□ -1.49
COMMD3-213ENST00000483684 C1QL2Q7Z5L3 287 aa5.73□□□□□ -1.49
COMMD3-213ENST00000483684 DDX42Q86XP3 938 aaKnown RBP eCLIP5.73□□□□□ -1.49
COMMD3-213ENST00000483684 MAPKAPK5Q8IW41 473 aa5.73□□□□□ -1.49
COMMD3-213ENST00000483684 OR56A1Q8NGH5 318 aa5.73□□□□□ -1.49
COMMD3-213ENST00000483684 SLC35B2Q8TB61 432 aa5.73□□□□□ -1.49
COMMD3-213ENST00000483684 LMBR1Q8WVP7 490 aa5.73□□□□□ -1.49
COMMD3-213ENST00000483684 AHCYL2Q96HN2 611 aaKnown RBP5.73□□□□□ -1.49
COMMD3-213ENST00000483684 PDLIM2Q96JY6 352 aa5.73□□□□□ -1.49
COMMD3-213ENST00000483684 QRSL1Q9H0R6 528 aaKnown RBP5.73□□□□□ -1.49
COMMD3-213ENST00000483684 TMEM74BQ9NUR3 256 aa5.73□□□□□ -1.49
COMMD3-213ENST00000483684 C14orf119Q9NWQ9 140 aa5.73□□□□□ -1.49
COMMD3-213ENST00000483684 DPP7Q9UHL4 492 aa5.73□□□□□ -1.49
COMMD3-213ENST00000483684 LRRC3CA6NJW4 275 aa5.72□□□□□ -1.49
COMMD3-213ENST00000483684 CGB1A6NKQ9 187 aa5.72□□□□□ -1.49
COMMD3-213ENST00000483684 PROP1O75360 226 aa5.72□□□□□ -1.49
COMMD3-213ENST00000483684 CTSSP25774 331 aa5.72□□□□□ -1.49
COMMD3-213ENST00000483684 CRHR1P34998 444 aa5.72□□□□□ -1.49
COMMD3-213ENST00000483684 FAPQ12884 760 aa5.72□□□□□ -1.49
COMMD3-213ENST00000483684 FAM47AQ5JRC9 791 aa5.72□□□□□ -1.49
COMMD3-213ENST00000483684 PRAMEF14Q5SWL7 426 aa5.72□□□□□ -1.49
COMMD3-213ENST00000483684 PDZD4Q76G19 769 aaPredicted RBP5.72□□□□□ -1.49
COMMD3-213ENST00000483684 C1QTNF7Q9BXJ2 289 aa5.72□□□□□ -1.49
COMMD3-213ENST00000483684 KIAA1586Q9HCI6 787 aa5.72□□□□□ -1.49
COMMD3-213ENST00000483684 RNF7Q9UBF6 113 aa5.72□□□□□ -1.49
COMMD3-213ENST00000483684 MCM8Q9UJA3 840 aa5.72□□□□□ -1.49
COMMD3-213ENST00000483684 CLRN1P58418 232 aa5.71□□□□□ -1.5
COMMD3-213ENST00000483684 CCT2P78371 535 aaKnown RBP5.71□□□□□ -1.5
COMMD3-213ENST00000483684 CDK17Q00537 523 aa5.71□□□□□ -1.5
COMMD3-213ENST00000483684 ATXN7L2Q5T6C5 722 aaPredicted RBP5.71□□□□□ -1.5
COMMD3-213ENST00000483684 KRTAP5-11Q6L8G4 156 aa5.71□□□□□ -1.5
COMMD3-213ENST00000483684 ARHGEF25Q86VW2 580 aa5.71□□□□□ -1.5
COMMD3-213ENST00000483684 RAX2Q96IS3 184 aa5.71□□□□□ -1.5
COMMD3-213ENST00000483684 ALOXE3Q9BYJ1 711 aa5.71□□□□□ -1.5
COMMD3-213ENST00000483684 PHLDB1Q86UU1 1377 aa5.7□□□□□ -1.5
COMMD3-213ENST00000483684 CXorf49A8MYA2 514 aaPredicted RBP5.7□□□□□ -1.5
COMMD3-213ENST00000483684 GPR3P46089 330 aa5.7□□□□□ -1.5
COMMD3-213ENST00000483684 MRPS9P82933 396 aaKnown RBP5.7□□□□□ -1.5
COMMD3-213ENST00000483684 OCA2Q04671 838 aa5.7□□□□□ -1.5
COMMD3-213ENST00000483684 SPDYE7PQ495Y7 208 aa5.7□□□□□ -1.5
COMMD3-213ENST00000483684 TOR2AQ5JU69 321 aa5.7□□□□□ -1.5
COMMD3-213ENST00000483684 SH2D3CQ8N5H7 860 aa5.7□□□□□ -1.5
COMMD3-213ENST00000483684 TSPEARQ8WU66 669 aa5.7□□□□□ -1.5
COMMD3-213ENST00000483684 AUTS2Q8WXX7 1259 aa5.7□□□□□ -1.5
COMMD3-213ENST00000483684 SMG7Q92540 1137 aaKnown RBP5.7□□□□□ -1.5
COMMD3-213ENST00000483684 ORAI2Q96SN7 254 aa5.7□□□□□ -1.5
COMMD3-213ENST00000483684 ATP8A1Q9Y2Q0 1164 aa5.7□□□□□ -1.5
COMMD3-213ENST00000483684 PNPLA7Q6ZV29 1317 aa5.7□□□□□ -1.5
COMMD3-213ENST00000483684 ERVK-21P61565 698 aa5.69□□□□□ -1.5
COMMD3-213ENST00000483684 SRSF2Q01130 221 aaKnown RBP5.69□□□□□ -1.5
COMMD3-213ENST00000483684 KCNK18Q7Z418 384 aa5.69□□□□□ -1.5
COMMD3-213ENST00000483684 C9orf106Q8NAJ2 232 aa5.69□□□□□ -1.5
COMMD3-213ENST00000483684 ZNF480Q8WV37 535 aa5.69□□□□□ -1.5
COMMD3-213ENST00000483684 BOD1Q96IK1 185 aa5.69□□□□□ -1.5
COMMD3-213ENST00000483684 CCM2LQ9NUG4 571 aaPredicted RBP5.69□□□□□ -1.5
COMMD3-213ENST00000483684 SLC5A4Q9NY91 659 aa5.69□□□□□ -1.5
COMMD3-213ENST00000483684 ATRNL1Q5VV63 1379 aa5.68□□□□□ -1.5
COMMD3-213ENST00000483684 ADCY6O43306 1168 aa5.68□□□□□ -1.5
COMMD3-213ENST00000483684 CANXP27824 592 aaKnown RBP5.68□□□□□ -1.5
COMMD3-213ENST00000483684 AMPD3Q01432 767 aa5.68□□□□□ -1.5
COMMD3-213ENST00000483684 MUM1Q2TAK8 710 aa5.68□□□□□ -1.5
COMMD3-213ENST00000483684 TSHZ3Q63HK5 1081 aa5.68□□□□□ -1.5
COMMD3-213ENST00000483684 CNTD1Q8N815 330 aa5.68□□□□□ -1.5
COMMD3-213ENST00000483684 KLK15Q9H2R5 256 aa5.68□□□□□ -1.5
COMMD3-213ENST00000483684 IFT122Q9HBG6 1241 aa5.68□□□□□ -1.5
COMMD3-213ENST00000483684 KMT5AQ9NQR1 393 aa5.68□□□□□ -1.5
COMMD3-213ENST00000483684 DNAJC28Q9NX36 388 aa5.68□□□□□ -1.5
COMMD3-213ENST00000483684 NOX1Q9Y5S8 564 aa5.68□□□□□ -1.5
COMMD3-213ENST00000483684 A0A1B0GTW7 788 aa5.67□□□□□ -1.5
COMMD3-213ENST00000483684 K7ESF4 209 aa5.67□□□□□ -1.5
COMMD3-213ENST00000483684 WNT10BO00744 389 aa5.67□□□□□ -1.5
COMMD3-213ENST00000483684 SNRPA1P09661 255 aaKnown RBP5.67□□□□□ -1.5
COMMD3-213ENST00000483684 MTHFD2P13995 350 aa5.67□□□□□ -1.5
COMMD3-213ENST00000483684 ABCG1P45844 678 aa5.67□□□□□ -1.5
COMMD3-213ENST00000483684 CDKN1CP49918 316 aaPredicted RBP5.67□□□□□ -1.5
COMMD3-213ENST00000483684 MST1LQ2TV78 715 aa5.67□□□□□ -1.5
COMMD3-213ENST00000483684 MED25Q71SY5 747 aa5.67□□□□□ -1.5
COMMD3-213ENST00000483684 ZNF572Q7Z3I7 529 aaPredicted RBP5.67□□□□□ -1.5
COMMD3-213ENST00000483684 FAM43AQ8N2R8 423 aa5.67□□□□□ -1.5
COMMD3-213ENST00000483684 Q8N9P0 234 aaPredicted RBP5.67□□□□□ -1.5
COMMD3-213ENST00000483684 NACC2Q96BF6 587 aa5.67□□□□□ -1.5
COMMD3-213ENST00000483684 FUBP3Q96I24 572 aaKnown RBP eCLIP5.67□□□□□ -1.5
COMMD3-213ENST00000483684 PAWRQ96IZ0 340 aaKnown RBP5.67□□□□□ -1.5
COMMD3-213ENST00000483684 PHACTR3Q96KR7 559 aa5.67□□□□□ -1.5
COMMD3-213ENST00000483684 ZSWIM1Q9BR11 485 aa5.67□□□□□ -1.5
COMMD3-213ENST00000483684 SLC17A6Q9P2U8 582 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms