RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 TCF25Q9BQ70 676 aa16.98■□□□□ 0.31
RPP40-206ENST00000483546 ZBP1Q9H171 429 aa16.98■□□□□ 0.31
RPP40-206ENST00000483546 ENTPD7Q9NQZ7 604 aa16.98■□□□□ 0.31
RPP40-206ENST00000483546 ADAM28Q9UKQ2 775 aa16.98■□□□□ 0.31
RPP40-206ENST00000483546 UBQLN1Q9UMX0 589 aaKnown RBP16.98■□□□□ 0.31
RPP40-206ENST00000483546 CASTOR2A6NHX0 329 aa16.97■□□□□ 0.31
RPP40-206ENST00000483546 EXTL3O43909 919 aa16.97■□□□□ 0.31
RPP40-206ENST00000483546 GADD45BO75293 160 aaPredicted RBP16.97■□□□□ 0.31
RPP40-206ENST00000483546 EFEMP2O95967 443 aa16.97■□□□□ 0.31
RPP40-206ENST00000483546 SOD2P04179 222 aa16.97■□□□□ 0.31
RPP40-206ENST00000483546 CTSAP10619 480 aa16.97■□□□□ 0.31
RPP40-206ENST00000483546 HOXD13P35453 343 aa16.97■□□□□ 0.31
RPP40-206ENST00000483546 ACOT2P49753 483 aa16.97■□□□□ 0.31
RPP40-206ENST00000483546 ERVFC1P60507 584 aa16.97■□□□□ 0.31
RPP40-206ENST00000483546 DCLRE1AQ6PJP8 1040 aa16.97■□□□□ 0.31
RPP40-206ENST00000483546 TMC7Q7Z402 723 aa16.97■□□□□ 0.31
RPP40-206ENST00000483546 RNF168Q8IYW5 571 aaPredicted RBP16.97■□□□□ 0.31
RPP40-206ENST00000483546 VPS52Q8N1B4 723 aa16.97■□□□□ 0.31
RPP40-206ENST00000483546 GPD1LQ8N335 351 aa16.97■□□□□ 0.31
RPP40-206ENST00000483546 TMEM174Q8WUU8 243 aa16.97■□□□□ 0.31
RPP40-206ENST00000483546 ZMAT2Q96NC0 199 aaKnown RBP16.97■□□□□ 0.31
RPP40-206ENST00000483546 HERC2P3Q9BVR0 1158 aa16.97■□□□□ 0.31
RPP40-206ENST00000483546 CXCL16Q9H2A7 254 aa16.97■□□□□ 0.31
RPP40-206ENST00000483546 COG5Q9UP83 839 aa16.97■□□□□ 0.31
RPP40-206ENST00000483546 C2CD2Q9Y426 696 aa16.97■□□□□ 0.31
RPP40-206ENST00000483546 SF3B1O75533 1304 aaKnown RBP eCLIP16.96■□□□□ 0.31
RPP40-206ENST00000483546 LACTBL1A8MY62 500 aa16.96■□□□□ 0.31
RPP40-206ENST00000483546 MEFVO15553 781 aaPredicted RBP16.96■□□□□ 0.31
RPP40-206ENST00000483546 TGFB1I1O43294 461 aa16.96■□□□□ 0.31
RPP40-206ENST00000483546 TADA2AO75478 443 aa16.96■□□□□ 0.31
RPP40-206ENST00000483546 PAX3P23760 479 aa16.96■□□□□ 0.31
RPP40-206ENST00000483546 IRS1P35568 1242 aa16.96■□□□□ 0.31
RPP40-206ENST00000483546 COL19A1Q14993 1142 aa16.96■□□□□ 0.31
RPP40-206ENST00000483546 SURF1Q15526 300 aa16.96■□□□□ 0.31
RPP40-206ENST00000483546 CCDC85BQ15834 202 aaPredicted RBP16.96■□□□□ 0.31
RPP40-206ENST00000483546 ZBTB6Q15916 424 aa16.96■□□□□ 0.31
RPP40-206ENST00000483546 UPP1Q16831 310 aa16.96■□□□□ 0.31
RPP40-206ENST00000483546 TCEAL5Q5H9L2 206 aa16.96■□□□□ 0.31
RPP40-206ENST00000483546 ZBTB41Q5SVQ8 909 aa16.96■□□□□ 0.31
RPP40-206ENST00000483546 FUT10Q6P4F1 479 aa16.96■□□□□ 0.31
RPP40-206ENST00000483546 CRELD2Q6UXH1 353 aaPredicted RBP16.96■□□□□ 0.31
RPP40-206ENST00000483546 BRSK2Q8IWQ3 736 aa16.96■□□□□ 0.31
RPP40-206ENST00000483546 SPATA20Q8TB22 786 aa16.96■□□□□ 0.31
RPP40-206ENST00000483546 BCL7CQ8WUZ0 217 aaPredicted RBP16.96■□□□□ 0.31
RPP40-206ENST00000483546 SMARCE1Q969G3 411 aa16.96■□□□□ 0.31
RPP40-206ENST00000483546 KIF12Q96FN5 646 aa16.96■□□□□ 0.31
RPP40-206ENST00000483546 CBWD1Q9BRT8 395 aa16.96■□□□□ 0.31
RPP40-206ENST00000483546 AGPAT3Q9NRZ7 376 aa16.96■□□□□ 0.31
RPP40-206ENST00000483546 PDXKO00764 312 aa16.95■□□□□ 0.3
RPP40-206ENST00000483546 TRAPPC3O43617 180 aa16.95■□□□□ 0.3
RPP40-206ENST00000483546 PRPF40AO75400 957 aaKnown RBP16.95■□□□□ 0.3
RPP40-206ENST00000483546 URODP06132 367 aa16.95■□□□□ 0.3
RPP40-206ENST00000483546 LRPAP1P30533 357 aa16.95■□□□□ 0.3
RPP40-206ENST00000483546 PNOCQ13519 176 aa16.95■□□□□ 0.3
RPP40-206ENST00000483546 MYBPC2Q14324 1141 aa16.95■□□□□ 0.3
RPP40-206ENST00000483546 NELFCDQ8IXH7 590 aa16.95■□□□□ 0.3
RPP40-206ENST00000483546 GUF1Q8N442 669 aaKnown RBP16.95■□□□□ 0.3
RPP40-206ENST00000483546 MRPL43Q8N983 215 aaKnown RBP16.95■□□□□ 0.3
RPP40-206ENST00000483546 PPM1EQ8WY54 764 aa16.95■□□□□ 0.3
RPP40-206ENST00000483546 FBXL18Q96ME1 805 aa16.95■□□□□ 0.3
RPP40-206ENST00000483546 FAM213AQ9BRX8 229 aa16.95■□□□□ 0.3
RPP40-206ENST00000483546 IKZF4Q9H2S9 585 aa16.95■□□□□ 0.3
RPP40-206ENST00000483546 HSPBP1Q9NZL4 362 aa16.95■□□□□ 0.3
RPP40-206ENST00000483546 ZNF233A6NK53 670 aa16.94■□□□□ 0.3
RPP40-206ENST00000483546 GOLGA6L22H0YM25 854 aa16.94■□□□□ 0.3
RPP40-206ENST00000483546 B3GAT3O94766 335 aa16.94■□□□□ 0.3
RPP40-206ENST00000483546 KIF4AO95239 1232 aa16.94■□□□□ 0.3
RPP40-206ENST00000483546 GLUD2P49448 558 aa16.94■□□□□ 0.3
RPP40-206ENST00000483546 CLCNKBP51801 687 aa16.94■□□□□ 0.3
RPP40-206ENST00000483546 CREMQ03060 361 aa16.94■□□□□ 0.3
RPP40-206ENST00000483546 SOX4Q06945 474 aaPredicted RBP16.94■□□□□ 0.3
RPP40-206ENST00000483546 TMEM132DQ14C87 1099 aa16.94■□□□□ 0.3
RPP40-206ENST00000483546 SKIV2LQ15477 1246 aaKnown RBP16.94■□□□□ 0.3
RPP40-206ENST00000483546 USP41Q3LFD5 358 aa16.94■□□□□ 0.3
RPP40-206ENST00000483546 COBLL1Q53SF7 1204 aa16.94■□□□□ 0.3
RPP40-206ENST00000483546 SPATA1Q5VX52 437 aa16.94■□□□□ 0.3
RPP40-206ENST00000483546 PLPP4Q5VZY2 271 aa16.94■□□□□ 0.3
RPP40-206ENST00000483546 PDXDC1Q6P996 788 aa16.94■□□□□ 0.3
RPP40-206ENST00000483546 SLC9A9Q8IVB4 645 aa16.94■□□□□ 0.3
RPP40-206ENST00000483546 BEST2Q8NFU1 509 aa16.94■□□□□ 0.3
RPP40-206ENST00000483546 PABPC5Q96DU9 382 aaKnown RBP16.94■□□□□ 0.3
RPP40-206ENST00000483546 PAAF1Q9BRP4 392 aa16.94■□□□□ 0.3
RPP40-206ENST00000483546 VN1R3Q9BXE9 311 aa16.94■□□□□ 0.3
RPP40-206ENST00000483546 TLE6Q9H808 572 aa16.94■□□□□ 0.3
RPP40-206ENST00000483546 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.94■□□□□ 0.3
RPP40-206ENST00000483546 MRPL17Q9NRX2 175 aaKnown RBP16.94■□□□□ 0.3
RPP40-206ENST00000483546 CHST7Q9NS84 486 aa16.94■□□□□ 0.3
RPP40-206ENST00000483546 RBAKQ9NYW8 714 aaPredicted RBP16.94■□□□□ 0.3
RPP40-206ENST00000483546 PCDHA5Q9Y5H7 936 aa16.94■□□□□ 0.3
RPP40-206ENST00000483546 C2orf71A6NGG8 1288 aa16.93■□□□□ 0.3
RPP40-206ENST00000483546 PODXLO00592 558 aa16.93■□□□□ 0.3
RPP40-206ENST00000483546 CXCL14O95715 111 aa16.93■□□□□ 0.3
RPP40-206ENST00000483546 SRGAP2BP0DMP2 458 aa16.93■□□□□ 0.3
RPP40-206ENST00000483546 PPP1R2P41236 205 aa16.93■□□□□ 0.3
RPP40-206ENST00000483546 DSG1Q02413 1049 aa16.93■□□□□ 0.3
RPP40-206ENST00000483546 HYAL1Q12794 435 aa16.93■□□□□ 0.3
RPP40-206ENST00000483546 PTPN14Q15678 1187 aa16.93■□□□□ 0.3
RPP40-206ENST00000483546 NFIL3Q16649 462 aa16.93■□□□□ 0.3
RPP40-206ENST00000483546 DUSP6Q16828 381 aa16.93■□□□□ 0.3
RPP40-206ENST00000483546 ZNF658Q5TYW1 1059 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms