RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 KIAA1671Q9BY89 1806 aa22.75■■□□□ 1.23
SEC13-217ENST00000482647 EXTL3O43909 919 aa22.74■■□□□ 1.23
SEC13-217ENST00000482647 KIF20AO95235 890 aa22.74■■□□□ 1.23
SEC13-217ENST00000482647 CXCL14O95715 111 aa22.74■■□□□ 1.23
SEC13-217ENST00000482647 RPL9P32969 192 aaKnown RBP22.74■■□□□ 1.23
SEC13-217ENST00000482647 PLPP4Q5VZY2 271 aa22.74■■□□□ 1.23
SEC13-217ENST00000482647 MRPL43Q8N983 215 aaKnown RBP22.74■■□□□ 1.23
SEC13-217ENST00000482647 FAM212AQ96EL1 285 aa22.74■■□□□ 1.23
SEC13-217ENST00000482647 KIF12Q96FN5 646 aa22.74■■□□□ 1.23
SEC13-217ENST00000482647 VN1R3Q9BXE9 311 aa22.74■■□□□ 1.23
SEC13-217ENST00000482647 PCIF1Q9H4Z3 704 aa22.74■■□□□ 1.23
SEC13-217ENST00000482647 ASB7Q9H672 318 aa22.74■■□□□ 1.23
SEC13-217ENST00000482647 TLE6Q9H808 572 aa22.74■■□□□ 1.23
SEC13-217ENST00000482647 RMND1Q9NWS8 449 aa22.74■■□□□ 1.23
SEC13-217ENST00000482647 CGNQ9P2M7 1197 aaKnown RBP22.74■■□□□ 1.23
SEC13-217ENST00000482647 CACNG4Q9UBN1 327 aa22.74■■□□□ 1.23
SEC13-217ENST00000482647 ADAM28Q9UKQ2 775 aa22.74■■□□□ 1.23
SEC13-217ENST00000482647 F8W810 466 aa22.73■■□□□ 1.23
SEC13-217ENST00000482647 TGFB1I1O43294 461 aa22.73■■□□□ 1.23
SEC13-217ENST00000482647 XPOTO43592 962 aaKnown RBP22.73■■□□□ 1.23
SEC13-217ENST00000482647 CTSAP10619 480 aa22.73■■□□□ 1.23
SEC13-217ENST00000482647 CLCNKBP51801 687 aa22.73■■□□□ 1.23
SEC13-217ENST00000482647 UPP1Q16831 310 aa22.73■■□□□ 1.23
SEC13-217ENST00000482647 CRELD2Q6UXH1 353 aaPredicted RBP22.73■■□□□ 1.23
SEC13-217ENST00000482647 GOLGA5Q8TBA6 731 aa22.73■■□□□ 1.23
SEC13-217ENST00000482647 C18orf25Q96B23 403 aaPredicted RBP22.73■■□□□ 1.23
SEC13-217ENST00000482647 SAAL1Q96ER3 474 aa22.73■■□□□ 1.23
SEC13-217ENST00000482647 ZBP1Q9H171 429 aa22.73■■□□□ 1.23
SEC13-217ENST00000482647 AGPAT3Q9NRZ7 376 aa22.73■■□□□ 1.23
SEC13-217ENST00000482647 PCDHGC5Q9Y5F6 944 aa22.73■■□□□ 1.23
SEC13-217ENST00000482647 B3GAT3O94766 335 aa22.72■■□□□ 1.23
SEC13-217ENST00000482647 KIF4AO95239 1232 aa22.72■■□□□ 1.23
SEC13-217ENST00000482647 EFEMP2O95967 443 aa22.72■■□□□ 1.23
SEC13-217ENST00000482647 SOD2P04179 222 aa22.72■■□□□ 1.23
SEC13-217ENST00000482647 CA8P35219 290 aa22.72■■□□□ 1.23
SEC13-217ENST00000482647 SOX4Q06945 474 aaPredicted RBP22.72■■□□□ 1.23
SEC13-217ENST00000482647 SPAG1Q07617 926 aa22.72■■□□□ 1.23
SEC13-217ENST00000482647 ZBTB6Q15916 424 aa22.72■■□□□ 1.23
SEC13-217ENST00000482647 GPD1LQ8N335 351 aa22.72■■□□□ 1.23
SEC13-217ENST00000482647 GBP4Q96PP9 640 aa22.72■■□□□ 1.23
SEC13-217ENST00000482647 GSDMAQ96QA5 445 aa22.72■■□□□ 1.23
SEC13-217ENST00000482647 IGFLR1Q9H665 355 aa22.72■■□□□ 1.23
SEC13-217ENST00000482647 GOLGA2P5Q9HBQ8 144 aa22.72■■□□□ 1.23
SEC13-217ENST00000482647 KIAA1586Q9HCI6 787 aa22.72■■□□□ 1.23
SEC13-217ENST00000482647 HSPBP1Q9NZL4 362 aa22.72■■□□□ 1.23
SEC13-217ENST00000482647 UBQLN1Q9UMX0 589 aaKnown RBP22.72■■□□□ 1.23
SEC13-217ENST00000482647 DERAQ9Y315 318 aa22.72■■□□□ 1.23
SEC13-217ENST00000482647 GOLGA8IPA6NC78 632 aa22.71■■□□□ 1.23
SEC13-217ENST00000482647 C2orf71A6NGG8 1288 aa22.71■■□□□ 1.23
SEC13-217ENST00000482647 GOLGA8JA6NMD2 632 aa22.71■■□□□ 1.23
SEC13-217ENST00000482647 HIDE1A8MVS5 230 aa22.71■■□□□ 1.23
SEC13-217ENST00000482647 PODXLO00592 558 aa22.71■■□□□ 1.23
SEC13-217ENST00000482647 IL18RAPO95256 599 aa22.71■■□□□ 1.23
SEC13-217ENST00000482647 CYP3A5P20815 502 aa22.71■■□□□ 1.23
SEC13-217ENST00000482647 NRIP1P48552 1158 aa22.71■■□□□ 1.23
SEC13-217ENST00000482647 HYAL1Q12794 435 aa22.71■■□□□ 1.23
SEC13-217ENST00000482647 ELAVL2Q12926 359 aaKnown RBP22.71■■□□□ 1.23
SEC13-217ENST00000482647 KIAA1841Q6NSI8 718 aa22.71■■□□□ 1.23
SEC13-217ENST00000482647 FUT10Q6P4F1 479 aa22.71■■□□□ 1.23
SEC13-217ENST00000482647 ADGRD2Q7Z7M1 963 aa22.71■■□□□ 1.23
SEC13-217ENST00000482647 RBM23Q86U06 439 aaKnown RBP22.71■■□□□ 1.23
SEC13-217ENST00000482647 NOC3LQ8WTT2 800 aaKnown RBP22.71■■□□□ 1.23
SEC13-217ENST00000482647 HLA-CQ95604 372 aa22.71■■□□□ 1.23
SEC13-217ENST00000482647 SMARCE1Q969G3 411 aa22.71■■□□□ 1.23
SEC13-217ENST00000482647 CDCA3Q99618 268 aaPredicted RBP22.71■■□□□ 1.23
SEC13-217ENST00000482647 HERC2P3Q9BVR0 1158 aa22.71■■□□□ 1.23
SEC13-217ENST00000482647 GPR62Q9BZJ7 368 aa22.71■■□□□ 1.23
SEC13-217ENST00000482647 MRPL17Q9NRX2 175 aaKnown RBP22.71■■□□□ 1.23
SEC13-217ENST00000482647 RBAKQ9NYW8 714 aaPredicted RBP22.71■■□□□ 1.23
SEC13-217ENST00000482647 COG5Q9UP83 839 aa22.71■■□□□ 1.23
SEC13-217ENST00000482647 SSX2IPQ9Y2D8 614 aa22.71■■□□□ 1.23
SEC13-217ENST00000482647 IRAK3Q9Y616 596 aa22.71■■□□□ 1.23
SEC13-217ENST00000482647 SF3B1O75533 1304 aaKnown RBP eCLIP22.71■■□□□ 1.23
SEC13-217ENST00000482647 FSD2A1L4K1 749 aa22.7■■□□□ 1.22
SEC13-217ENST00000482647 TMEM189-UBE2V1I3L0A0 370 aa22.7■■□□□ 1.22
SEC13-217ENST00000482647 CLIC2O15247 247 aa22.7■■□□□ 1.22
SEC13-217ENST00000482647 URODP06132 367 aa22.7■■□□□ 1.22
SEC13-217ENST00000482647 TMEM132DQ14C87 1099 aa22.7■■□□□ 1.22
SEC13-217ENST00000482647 USP41Q3LFD5 358 aa22.7■■□□□ 1.22
SEC13-217ENST00000482647 JADE1Q6IE81 842 aa22.7■■□□□ 1.22
SEC13-217ENST00000482647 TAS1R1Q7RTX1 841 aa22.7■■□□□ 1.22
SEC13-217ENST00000482647 RNF168Q8IYW5 571 aaPredicted RBP22.7■■□□□ 1.22
SEC13-217ENST00000482647 ZSWIM2Q8NEG5 633 aa22.7■■□□□ 1.22
SEC13-217ENST00000482647 HASPINQ8TF76 798 aa22.7■■□□□ 1.22
SEC13-217ENST00000482647 GTPBP4Q9BZE4 634 aaKnown RBP22.7■■□□□ 1.22
SEC13-217ENST00000482647 TUBGCP4Q9UGJ1 667 aa22.7■■□□□ 1.22
SEC13-217ENST00000482647 C2CD2Q9Y426 696 aa22.7■■□□□ 1.22
SEC13-217ENST00000482647 PCDHA5Q9Y5H7 936 aa22.7■■□□□ 1.22
SEC13-217ENST00000482647 MYO7AQ13402 2215 aa22.7■■□□□ 1.22
SEC13-217ENST00000482647 XIRP2A4UGR9 3374 aa22.69■■□□□ 1.22
SEC13-217ENST00000482647 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.69■■□□□ 1.22
SEC13-217ENST00000482647 ZNF233A6NK53 670 aa22.69■■□□□ 1.22
SEC13-217ENST00000482647 TULP1O00294 542 aaPredicted RBP22.69■■□□□ 1.22
SEC13-217ENST00000482647 PER2O15055 1255 aa22.69■■□□□ 1.22
SEC13-217ENST00000482647 TRAPPC3O43617 180 aa22.69■■□□□ 1.22
SEC13-217ENST00000482647 GLUD2P49448 558 aa22.69■■□□□ 1.22
SEC13-217ENST00000482647 COL19A1Q14993 1142 aa22.69■■□□□ 1.22
SEC13-217ENST00000482647 BRSK2Q8IWQ3 736 aa22.69■■□□□ 1.22
SEC13-217ENST00000482647 C12orf56Q8IXR9 622 aa22.69■■□□□ 1.22
SEC13-217ENST00000482647 XXYLT1Q8NBI6 393 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms