RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 FAM90A1Q86YD7 464 aa7.25□□□□□ -1.25
SF3B1-210ENST00000482158 SLC35A4Q96G79 324 aa7.25□□□□□ -1.25
SF3B1-210ENST00000482158 CPEB1Q9BZB8 566 aaKnown RBP7.25□□□□□ -1.25
SF3B1-210ENST00000482158 C11orf54Q9H0W9 315 aaPredicted RBP7.25□□□□□ -1.25
SF3B1-210ENST00000482158 PNPOQ9NVS9 261 aa7.25□□□□□ -1.25
SF3B1-210ENST00000482158 TBKBP1A7MCY6 615 aa7.24□□□□□ -1.25
SF3B1-210ENST00000482158 B5MCH6 92 aa7.24□□□□□ -1.25
SF3B1-210ENST00000482158 PJA2O43164 708 aa7.24□□□□□ -1.25
SF3B1-210ENST00000482158 TEX33O43247 280 aa7.24□□□□□ -1.25
SF3B1-210ENST00000482158 INHBBP09529 407 aa7.24□□□□□ -1.25
SF3B1-210ENST00000482158 PRDX5P30044 214 aa7.24□□□□□ -1.25
SF3B1-210ENST00000482158 CNN3Q15417 329 aaKnown RBP7.24□□□□□ -1.25
SF3B1-210ENST00000482158 COBLL1Q53SF7 1204 aa7.24□□□□□ -1.25
SF3B1-210ENST00000482158 SPTY2D1Q68D10 685 aaPredicted RBP7.24□□□□□ -1.25
SF3B1-210ENST00000482158 SPOCD1Q6ZMY3 1216 aa7.24□□□□□ -1.25
SF3B1-210ENST00000482158 APBB1IPQ7Z5R6 666 aaPredicted RBP7.24□□□□□ -1.25
SF3B1-210ENST00000482158 PPP1R3BQ86XI6 285 aa7.24□□□□□ -1.25
SF3B1-210ENST00000482158 SH2D3CQ8N5H7 860 aa7.24□□□□□ -1.25
SF3B1-210ENST00000482158 PJA1Q8NG27 643 aa7.24□□□□□ -1.25
SF3B1-210ENST00000482158 TTC17Q96AE7 1141 aa7.24□□□□□ -1.25
SF3B1-210ENST00000482158 SLC39A13Q96H72 371 aa7.24□□□□□ -1.25
SF3B1-210ENST00000482158 FAM167AQ96KS9 214 aa7.24□□□□□ -1.25
SF3B1-210ENST00000482158 TEPSINQ96N21 525 aa7.24□□□□□ -1.25
SF3B1-210ENST00000482158 NDC1Q9BTX1 674 aa7.24□□□□□ -1.25
SF3B1-210ENST00000482158 ZMAT3Q9HA38 289 aaKnown RBP7.24□□□□□ -1.25
SF3B1-210ENST00000482158 HECAQ9UBI9 543 aaPredicted RBP7.24□□□□□ -1.25
SF3B1-210ENST00000482158 A0A0G2JLL6 359 aaPredicted RBP7.23□□□□□ -1.25
SF3B1-210ENST00000482158 TCRBV7S2A1N4TA0A589 114 aa7.23□□□□□ -1.25
SF3B1-210ENST00000482158 CAPN8A6NHC0 703 aa7.23□□□□□ -1.25
SF3B1-210ENST00000482158 PRSS29PA6NIE9 313 aa7.23□□□□□ -1.25
SF3B1-210ENST00000482158 PATE3B3GLJ2 98 aa7.23□□□□□ -1.25
SF3B1-210ENST00000482158 H3BUI4 141 aa7.23□□□□□ -1.25
SF3B1-210ENST00000482158 GRM6O15303 877 aa7.23□□□□□ -1.25
SF3B1-210ENST00000482158 CD1AP06126 327 aa7.23□□□□□ -1.25
SF3B1-210ENST00000482158 ATP5JP18859 108 aa7.23□□□□□ -1.25
SF3B1-210ENST00000482158 PTH1RQ03431 593 aa7.23□□□□□ -1.25
SF3B1-210ENST00000482158 CCDC157Q569K6 752 aa7.23□□□□□ -1.25
SF3B1-210ENST00000482158 Q6ZSN1 163 aa7.23□□□□□ -1.25
SF3B1-210ENST00000482158 CCDC149Q6ZUS6 474 aa7.23□□□□□ -1.25
SF3B1-210ENST00000482158 MAEAQ7L5Y9 396 aa7.23□□□□□ -1.25
SF3B1-210ENST00000482158 ELOA2Q8IYF1 753 aaPredicted RBP7.23□□□□□ -1.25
SF3B1-210ENST00000482158 CELF5Q8N6W0 485 aaKnown RBP7.23□□□□□ -1.25
SF3B1-210ENST00000482158 IL17RDQ8NFM7 739 aa7.23□□□□□ -1.25
SF3B1-210ENST00000482158 DNERQ8NFT8 737 aa7.23□□□□□ -1.25
SF3B1-210ENST00000482158 C1orf43Q9BWL3 253 aa7.23□□□□□ -1.25
SF3B1-210ENST00000482158 C22orf23Q9BZE7 217 aa7.23□□□□□ -1.25
SF3B1-210ENST00000482158 EPC1Q9H2F5 836 aa7.23□□□□□ -1.25
SF3B1-210ENST00000482158 MRPL46Q9H2W6 279 aaKnown RBP7.23□□□□□ -1.25
SF3B1-210ENST00000482158 FAM30AQ9NZY2 134 aa7.23□□□□□ -1.25
SF3B1-210ENST00000482158 STAP2Q9UGK3 403 aa7.23□□□□□ -1.25
SF3B1-210ENST00000482158 FAM50BQ9Y247 325 aa7.23□□□□□ -1.25
SF3B1-210ENST00000482158 SNRPA1P09661 255 aaKnown RBP7.22□□□□□ -1.25
SF3B1-210ENST00000482158 FTH1P19P0C7X4 201 aa7.22□□□□□ -1.25
SF3B1-210ENST00000482158 CLRN1P58418 232 aa7.22□□□□□ -1.25
SF3B1-210ENST00000482158 SEMA5AQ13591 1074 aa7.22□□□□□ -1.25
SF3B1-210ENST00000482158 FGL2Q14314 439 aa7.22□□□□□ -1.25
SF3B1-210ENST00000482158 ELAVL1Q15717 326 aaKnown RBP7.22□□□□□ -1.25
SF3B1-210ENST00000482158 PABPC1LQ4VXU2 614 aaKnown RBP7.22□□□□□ -1.25
SF3B1-210ENST00000482158 RNF220Q5VTB9 566 aa7.22□□□□□ -1.25
SF3B1-210ENST00000482158 C1QL3Q5VWW1 255 aa7.22□□□□□ -1.25
SF3B1-210ENST00000482158 MFSD5Q6N075 450 aa7.22□□□□□ -1.25
SF3B1-210ENST00000482158 ZNF529Q6P280 563 aa7.22□□□□□ -1.25
SF3B1-210ENST00000482158 APOA5Q6Q788 366 aa7.22□□□□□ -1.25
SF3B1-210ENST00000482158 UBE3BQ7Z3V4 1068 aa7.22□□□□□ -1.25
SF3B1-210ENST00000482158 FAM83AQ86UY5 434 aa7.22□□□□□ -1.25
SF3B1-210ENST00000482158 CIR1Q86X95 450 aaPredicted RBP7.22□□□□□ -1.25
SF3B1-210ENST00000482158 CCAR1Q8IX12 1150 aaKnown RBP7.22□□□□□ -1.25
SF3B1-210ENST00000482158 MDGA1Q8NFP4 955 aa7.22□□□□□ -1.25
SF3B1-210ENST00000482158 OR52N2Q8NGI0 321 aa7.22□□□□□ -1.25
SF3B1-210ENST00000482158 MPHOSPH9Q99550 1183 aa7.22□□□□□ -1.25
SF3B1-210ENST00000482158 CPPED1Q9BRF8 314 aaPredicted RBP7.22□□□□□ -1.25
SF3B1-210ENST00000482158 WDCPQ9H6R7 721 aa7.22□□□□□ -1.25
SF3B1-210ENST00000482158 FBXO34Q9NWN3 711 aa7.22□□□□□ -1.25
SF3B1-210ENST00000482158 PCDHA1Q9Y5I3 950 aa7.22□□□□□ -1.25
SF3B1-210ENST00000482158 SLC5A1P13866 664 aa7.21□□□□□ -1.26
SF3B1-210ENST00000482158 HOXA5P20719 270 aa7.21□□□□□ -1.26
SF3B1-210ENST00000482158 SMARCA1P28370 1054 aa7.21□□□□□ -1.26
SF3B1-210ENST00000482158 FAM193AP78312 1265 aa7.21□□□□□ -1.26
SF3B1-210ENST00000482158 GPSM2P81274 684 aa7.21□□□□□ -1.26
SF3B1-210ENST00000482158 SAFBQ15424 915 aaKnown RBP eCLIP7.21□□□□□ -1.26
SF3B1-210ENST00000482158 KIAA0753Q2KHM9 967 aa7.21□□□□□ -1.26
SF3B1-210ENST00000482158 GLB1LQ6UWU2 654 aa7.21□□□□□ -1.26
SF3B1-210ENST00000482158 D2HGDHQ8N465 521 aa7.21□□□□□ -1.26
SF3B1-210ENST00000482158 Q8TCH9 128 aa7.21□□□□□ -1.26
SF3B1-210ENST00000482158 ST8SIA2Q92186 375 aa7.21□□□□□ -1.26
SF3B1-210ENST00000482158 MRGPRX1Q96LB2 322 aa7.21□□□□□ -1.26
SF3B1-210ENST00000482158 C20orf173Q96LM9 149 aa7.21□□□□□ -1.26
SF3B1-210ENST00000482158 WWC2-AS2Q96NR7 200 aa7.21□□□□□ -1.26
SF3B1-210ENST00000482158 RTEL1Q9NZ71 1219 aa7.21□□□□□ -1.26
SF3B1-210ENST00000482158 FEZ2Q9UHY8 353 aaPredicted RBP7.21□□□□□ -1.26
SF3B1-210ENST00000482158 PCDHGB6Q9Y5F9 930 aa7.21□□□□□ -1.26
SF3B1-210ENST00000482158 GOLIM4O00461 696 aa7.2□□□□□ -1.26
SF3B1-210ENST00000482158 SLC43A1O75387 559 aa7.2□□□□□ -1.26
SF3B1-210ENST00000482158 AHSGP02765 367 aa7.2□□□□□ -1.26
SF3B1-210ENST00000482158 ITGB3P05106 788 aa7.2□□□□□ -1.26
SF3B1-210ENST00000482158 PHKG2P15735 406 aa7.2□□□□□ -1.26
SF3B1-210ENST00000482158 GNAT2P19087 354 aa7.2□□□□□ -1.26
SF3B1-210ENST00000482158 RAP2BP61225 183 aa7.2□□□□□ -1.26
SF3B1-210ENST00000482158 UBE4AQ14139 1066 aa7.2□□□□□ -1.26
SF3B1-210ENST00000482158 DARS2Q6PI48 645 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms