RNA–Protein interactions for RNA: ENST00000481152.2

CHCHD3-205, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 2

Gene CHCHD3, Length 1,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-205ENST00000481152 SERPINB3P29508 390 aa5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 MOGSQ13724 837 aa5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 ZNF460Q14592 562 aa5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 TAX1BP1Q86VP1 789 aa5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 SUGP1Q8IWZ8 645 aaKnown RBP5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 RPAP2Q8IXW5 612 aaPredicted RBP5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 GIMAP8Q8ND71 665 aaPredicted RBP5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 VPS37AQ8NEZ2 397 aa5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 PJA1Q8NG27 643 aa5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 Q8TCH9 128 aa5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 CALML6Q8TD86 181 aa5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 ERCC4Q92889 916 aaPredicted RBP5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 TIFAQ96CG3 184 aa5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 ERP27Q96DN0 273 aa5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 STRBPQ96SI9 672 aaKnown RBP5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 CDK5RAP1Q96SZ6 601 aaKnown RBP5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 HERPUD2Q9BSE4 406 aa5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 SARGQ9BW04 601 aa5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 KRTAP4-5Q9BYR2 181 aa5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 CCDC8Q9H0W5 538 aaPredicted RBP5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 SLC5A4Q9NY91 659 aa5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 Q9UFV3 132 aa5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 POLG2Q9UHN1 485 aa5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 OAZ3Q9UMX2 235 aa5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 RABGAP1Q9Y3P9 1069 aa5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 NR2E1Q9Y466 385 aa5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 CTDP1Q9Y5B0 961 aaPredicted RBP5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 ALKQ9UM73 1620 aa5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 KIAA0232Q92628 1395 aa5.85□□□□□ -1.47
CHCHD3-205ENST00000481152 C3P01024 1663 aa5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 RIMBP3CA6NJZ7 1639 aa5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 RIMBP3BA6NNM3 1639 aa5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 RIMBP3Q9UFD9 1639 aa5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 PIP5K1CO60331 668 aa5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 RFPL1O75677 317 aa5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 RFPL3O75679 317 aa5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 RRM1P23921 792 aa5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 MSNP26038 577 aaKnown RBP5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 NFYCQ13952 458 aa5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 NOLC1Q14978 699 aaKnown RBP eCLIP5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 PCOLCEQ15113 449 aa5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 TBR1Q16650 682 aa5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 LONRF1Q17RB8 773 aa5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 TTC22Q5TAA0 569 aa5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 AGBL4Q5VU57 503 aa5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 TRIM68Q6AZZ1 485 aa5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 GRAMD4Q6IC98 578 aa5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 STRA8Q7Z7C7 330 aa5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 RTN4RL1Q86UN2 441 aaPredicted RBP5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 TTC30BQ8N4P2 665 aa5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 PPHLN1Q8NEY8 458 aaKnown RBP5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 FOXRED1Q96CU9 486 aaPredicted RBP5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 GPR101Q96P66 508 aaPredicted RBP5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 DPYSL5Q9BPU6 564 aa5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 LMBRD1Q9NUN5 540 aa5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 C9orf78Q9NZ63 289 aaPredicted RBP5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 CLIC5Q9NZA1 410 aa5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 FBXO2Q9UK22 296 aaPredicted RBP5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 HDAC9Q9UKV0 1011 aa5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 ZFR2Q9UPR6 939 aaKnown RBP5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 DDX49Q9Y6V7 483 aaKnown RBP5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 EDC4Q6P2E9 1401 aaKnown RBP5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 SSH2Q76I76 1423 aa5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 ATP10DQ9P241 1426 aa5.84□□□□□ -1.47
CHCHD3-205ENST00000481152 KLRG2A4D1S0 409 aaPredicted RBP5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 PRSS47A8MTI9 375 aa5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 DYNC1I1O14576 645 aa5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 ARHGAP6O43182 974 aa5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 MAFO75444 373 aaPredicted RBP5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 REC8O95072 547 aa5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 SDSP20132 328 aa5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 APEX1P27695 318 aaKnown RBP5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 FNTBP49356 437 aa5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 MEOX1P50221 254 aa5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 KIF11P52732 1056 aa5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 ALDH6A1Q02252 535 aaKnown RBP5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 TCIRG1Q13488 830 aa5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 R3HDM1Q15032 1099 aaKnown RBP5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 CCDC96Q2M329 555 aa5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 ANKRD45Q5TZF3 282 aa5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 CASC1Q6TDU7 716 aa5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 ZNF354CQ86Y25 554 aa5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 PALM2Q8IXS6 379 aa5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 RTKN2Q8IZC4 609 aa5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 ANKRD44Q8N8A2 993 aa5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 SNRNP27Q8WVK2 155 aaKnown RBP5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 JPH3Q8WXH2 748 aaPredicted RBP5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 SKA1Q96BD8 255 aa5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 MPP4Q96JB8 637 aa5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 SCLT1Q96NL6 688 aa5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 FOXB1Q99853 325 aa5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 ELAC2Q9BQ52 826 aaKnown RBP5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 TARS2Q9BW92 718 aaKnown RBP5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 RHOBTB2Q9BYZ6 727 aa5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 CABP5Q9NP86 173 aa5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 PRDM11Q9NQV5 511 aa5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 RGPD1P0DJD0 1748 aa5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 NALCNQ8IZF0 1738 aa5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 ARHGEF10O15013 1369 aa5.83□□□□□ -1.48
CHCHD3-205ENST00000481152 PTPRCP08575 1304 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms