RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 USP20Q9Y2K6 914 aa8.96□□□□□ -0.98
USP54-212ENST00000480210 FAN1Q9Y2M0 1017 aa8.96□□□□□ -0.98
USP54-212ENST00000480210 HES2Q9Y543 173 aa8.96□□□□□ -0.98
USP54-212ENST00000480210 LINC01553A4QN01 128 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 LACTBL1A8MY62 500 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 CXCL8P10145 99 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 DNAJB2P25686 324 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 LRPAP1P30533 357 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 GTF2H1P32780 548 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 BMPR1AP36894 532 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 MLH1P40692 756 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 ACOT2P49753 483 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 CYP2J2P51589 502 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 OSTNP61366 133 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 PLCB3Q01970 1234 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 KRT17Q04695 432 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 DSC1Q08554 894 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 ELAVL2Q12926 359 aaKnown RBP8.95□□□□□ -0.98
USP54-212ENST00000480210 PSMD6Q15008 389 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 ZBTB6Q15916 424 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 ENOX2Q16206 610 aaKnown RBP8.95□□□□□ -0.98
USP54-212ENST00000480210 TPD52L1Q16890 204 aaPredicted RBP8.95□□□□□ -0.98
USP54-212ENST00000480210 DUOXA2Q1HG44 320 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 PDE12Q6L8Q7 609 aaKnown RBP8.95□□□□□ -0.98
USP54-212ENST00000480210 DCLRE1AQ6PJP8 1040 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 FRMD5Q7Z6J6 570 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 WDR49Q8IV35 697 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 FAM114A1Q8IWE2 563 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 TMEM192Q8IY95 271 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 COLGALT2Q8IYK4 626 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 GPR65Q8IYL9 337 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 SMYD4Q8IYR2 804 aaPredicted RBP8.95□□□□□ -0.98
USP54-212ENST00000480210 CEP120Q8N960 986 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 ENOX1Q8TC92 643 aaKnown RBP8.95□□□□□ -0.98
USP54-212ENST00000480210 KIF12Q96FN5 646 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 ANKRD36BP1Q96IX9 119 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 ZNF558Q96NG5 402 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 PPP1R10Q96QC0 940 aaKnown RBP8.95□□□□□ -0.98
USP54-212ENST00000480210 LMAN2LQ9H0V9 348 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 CWH43Q9H720 699 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 NRDE2Q9H7Z3 1164 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 MIOSQ9NXC5 875 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 LMCD1Q9NZU5 365 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 PUF60Q9UHX1 559 aaKnown RBP8.95□□□□□ -0.98
USP54-212ENST00000480210 LZTS1Q9Y250 596 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 SSX2IPQ9Y2D8 614 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 INPP5FQ9Y2H2 1132 aa8.95□□□□□ -0.98
USP54-212ENST00000480210 R3HCC1Q9Y3T6 440 aaKnown RBP8.95□□□□□ -0.98
USP54-212ENST00000480210 TRIOBPQ9H2D6 2365 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 SCN1AP35498 2009 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 MEIS3P2A8K0S8 358 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 SMTNL1A8MU46 457 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 GRXCR1A8MXD5 290 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 TISP43B9A030 160 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 TMEM189-UBE2V1I3L0A0 370 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 PTGESO14684 152 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 TRAPPC3O43617 180 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 POMCP01189 267 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 TNNC2P02585 160 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 CA3P07451 260 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 GALTP07902 379 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 CD44P16070 742 aaKnown RBP8.94□□□□□ -0.98
USP54-212ENST00000480210 IBSPP21815 317 aaPredicted RBP8.94□□□□□ -0.98
USP54-212ENST00000480210 PNPLA4P41247 253 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 TNFSF9P41273 254 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 SCNN1GP51170 649 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 RABGGTBP53611 331 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 MARSP56192 900 aaKnown RBP8.94□□□□□ -0.98
USP54-212ENST00000480210 FAM193AP78312 1265 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 CLDN10P78369 228 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 CYP24A1Q07973 514 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 TMEM132DQ14C87 1099 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 PAN2Q504Q3 1202 aaKnown RBP8.94□□□□□ -0.98
USP54-212ENST00000480210 HABP4Q5JVS0 413 aaKnown RBP8.94□□□□□ -0.98
USP54-212ENST00000480210 ZNF697Q5TEC3 545 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 SPATA1Q5VX52 437 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 CEP135Q66GS9 1140 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 PPP2R2DQ66LE6 453 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 KLHL10Q6JEL2 608 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 TTI2Q6NXR4 508 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 KCNT2Q6UVM3 1135 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 LRRC55Q6ZSA7 311 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 FAM186BQ8IYM0 893 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 CSGALNACT2Q8N6G5 542 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 PARD3BQ8TEW8 1205 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 FAM212AQ96EL1 285 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 SAAL1Q96ER3 474 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 ZFP42Q96MM3 310 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 BPIFA3Q9BQP9 254 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 C11orf84Q9BUA3 381 aaPredicted RBP8.94□□□□□ -0.98
USP54-212ENST00000480210 NKX2-4Q9H2Z4 354 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 THAP9Q9H5L6 903 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 SPG21Q9NZD8 308 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 KLK14Q9P0G3 267 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 PRDM4Q9UKN5 801 aa8.94□□□□□ -0.98
USP54-212ENST00000480210 MRPL42Q9Y6G3 142 aaKnown RBP8.94□□□□□ -0.98
USP54-212ENST00000480210 GOLGA8IPA6NC78 632 aa8.93□□□□□ -0.98
USP54-212ENST00000480210 GOLGA8JA6NMD2 632 aa8.93□□□□□ -0.98
USP54-212ENST00000480210 H3BNC9 293 aa8.93□□□□□ -0.98
USP54-212ENST00000480210 NRP1O14786 923 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms