RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 SSX2IPQ9Y2D8 614 aa22.28■■□□□ 1.16
VARS-224ENST00000479051 SF3B1O75533 1304 aaKnown RBP eCLIP22.28■■□□□ 1.16
VARS-224ENST00000479051 LACTBL1A8MY62 500 aa22.27■■□□□ 1.16
VARS-224ENST00000479051 GADD45BO75293 160 aaPredicted RBP22.27■■□□□ 1.16
VARS-224ENST00000479051 RHOBTB3O94955 611 aa22.27■■□□□ 1.16
VARS-224ENST00000479051 IL18RAPO95256 599 aa22.27■■□□□ 1.16
VARS-224ENST00000479051 SOD2P04179 222 aa22.27■■□□□ 1.16
VARS-224ENST00000479051 URODP06132 367 aa22.27■■□□□ 1.16
VARS-224ENST00000479051 RPL9P32969 192 aaKnown RBP22.27■■□□□ 1.16
VARS-224ENST00000479051 ELAVL2Q12926 359 aaKnown RBP22.27■■□□□ 1.16
VARS-224ENST00000479051 STK4Q13043 487 aa22.27■■□□□ 1.16
VARS-224ENST00000479051 KIAA1841Q6NSI8 718 aa22.27■■□□□ 1.16
VARS-224ENST00000479051 FUT10Q6P4F1 479 aa22.27■■□□□ 1.16
VARS-224ENST00000479051 DCLRE1AQ6PJP8 1040 aa22.27■■□□□ 1.16
VARS-224ENST00000479051 NOC3LQ8WTT2 800 aaKnown RBP22.27■■□□□ 1.16
VARS-224ENST00000479051 HLA-CQ95604 372 aa22.27■■□□□ 1.16
VARS-224ENST00000479051 CBWD1Q9BRT8 395 aa22.27■■□□□ 1.16
VARS-224ENST00000479051 HERC2P3Q9BVR0 1158 aa22.27■■□□□ 1.16
VARS-224ENST00000479051 ASB7Q9H672 318 aa22.27■■□□□ 1.16
VARS-224ENST00000479051 THEGQ9P2T0 379 aa22.27■■□□□ 1.16
VARS-224ENST00000479051 UBQLN1Q9UMX0 589 aaKnown RBP22.27■■□□□ 1.16
VARS-224ENST00000479051 TRIP11Q15643 1979 aa22.27■■□□□ 1.15
VARS-224ENST00000479051 EXTL3O43909 919 aa22.26■■□□□ 1.15
VARS-224ENST00000479051 B3GAT3O94766 335 aa22.26■■□□□ 1.15
VARS-224ENST00000479051 KIF4AO95239 1232 aa22.26■■□□□ 1.15
VARS-224ENST00000479051 CXCL14O95715 111 aa22.26■■□□□ 1.15
VARS-224ENST00000479051 PNOCQ13519 176 aa22.26■■□□□ 1.15
VARS-224ENST00000479051 ELOA2Q8IYF1 753 aaPredicted RBP22.26■■□□□ 1.15
VARS-224ENST00000479051 GPD1LQ8N335 351 aa22.26■■□□□ 1.15
VARS-224ENST00000479051 MRPL43Q8N983 215 aaKnown RBP22.26■■□□□ 1.15
VARS-224ENST00000479051 KIAA0895Q8NCT3 520 aa22.26■■□□□ 1.15
VARS-224ENST00000479051 RABGGTAQ92696 567 aa22.26■■□□□ 1.15
VARS-224ENST00000479051 SAAL1Q96ER3 474 aa22.26■■□□□ 1.15
VARS-224ENST00000479051 GBP4Q96PP9 640 aa22.26■■□□□ 1.15
VARS-224ENST00000479051 PCIF1Q9H4Z3 704 aa22.26■■□□□ 1.15
VARS-224ENST00000479051 IGFLR1Q9H665 355 aa22.26■■□□□ 1.15
VARS-224ENST00000479051 KIAA1586Q9HCI6 787 aa22.26■■□□□ 1.15
VARS-224ENST00000479051 MRPL17Q9NRX2 175 aaKnown RBP22.26■■□□□ 1.15
VARS-224ENST00000479051 CACNG4Q9UBN1 327 aa22.26■■□□□ 1.15
VARS-224ENST00000479051 DERAQ9Y315 318 aa22.26■■□□□ 1.15
VARS-224ENST00000479051 PCDHGC5Q9Y5F6 944 aa22.26■■□□□ 1.15
VARS-224ENST00000479051 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.25■■□□□ 1.15
VARS-224ENST00000479051 TMEM189-UBE2V1I3L0A0 370 aa22.25■■□□□ 1.15
VARS-224ENST00000479051 MEFVO15553 781 aaPredicted RBP22.25■■□□□ 1.15
VARS-224ENST00000479051 TRAPPC3O43617 180 aa22.25■■□□□ 1.15
VARS-224ENST00000479051 PRPF40AO75400 957 aaKnown RBP22.25■■□□□ 1.15
VARS-224ENST00000479051 ADRB2P07550 413 aa22.25■■□□□ 1.15
VARS-224ENST00000479051 CYP3A5P20815 502 aa22.25■■□□□ 1.15
VARS-224ENST00000479051 HOXD13P35453 343 aa22.25■■□□□ 1.15
VARS-224ENST00000479051 NRIP1P48552 1158 aa22.25■■□□□ 1.15
VARS-224ENST00000479051 GLUD2P49448 558 aa22.25■■□□□ 1.15
VARS-224ENST00000479051 CLCNKBP51801 687 aa22.25■■□□□ 1.15
VARS-224ENST00000479051 HYAL1Q12794 435 aa22.25■■□□□ 1.15
VARS-224ENST00000479051 TMEM132DQ14C87 1099 aa22.25■■□□□ 1.15
VARS-224ENST00000479051 UPP1Q16831 310 aa22.25■■□□□ 1.15
VARS-224ENST00000479051 EP400NLQ6ZTU2 488 aa22.25■■□□□ 1.15
VARS-224ENST00000479051 ADGRD2Q7Z7M1 963 aa22.25■■□□□ 1.15
VARS-224ENST00000479051 RBM23Q86U06 439 aaKnown RBP22.25■■□□□ 1.15
VARS-224ENST00000479051 BEST2Q8NFU1 509 aa22.25■■□□□ 1.15
VARS-224ENST00000479051 SMARCE1Q969G3 411 aa22.25■■□□□ 1.15
VARS-224ENST00000479051 C18orf25Q96B23 403 aaPredicted RBP22.25■■□□□ 1.15
VARS-224ENST00000479051 GSDMAQ96QA5 445 aa22.25■■□□□ 1.15
VARS-224ENST00000479051 PAAF1Q9BRP4 392 aa22.25■■□□□ 1.15
VARS-224ENST00000479051 VN1R3Q9BXE9 311 aa22.25■■□□□ 1.15
VARS-224ENST00000479051 GTPBP4Q9BZE4 634 aaKnown RBP22.25■■□□□ 1.15
VARS-224ENST00000479051 GOLGA2P5Q9HBQ8 144 aa22.25■■□□□ 1.15
VARS-224ENST00000479051 AGPAT3Q9NRZ7 376 aa22.25■■□□□ 1.15
VARS-224ENST00000479051 IRAK3Q9Y616 596 aa22.25■■□□□ 1.15
VARS-224ENST00000479051 ATG2AQ2TAZ0 1938 aa22.24■■□□□ 1.15
VARS-224ENST00000479051 C2orf71A6NGG8 1288 aa22.24■■□□□ 1.15
VARS-224ENST00000479051 F8W810 466 aa22.24■■□□□ 1.15
VARS-224ENST00000479051 TULP1O00294 542 aaPredicted RBP22.24■■□□□ 1.15
VARS-224ENST00000479051 PODXLO00592 558 aa22.24■■□□□ 1.15
VARS-224ENST00000479051 TGFB1I1O43294 461 aa22.24■■□□□ 1.15
VARS-224ENST00000479051 SRGAP2BP0DMP2 458 aa22.24■■□□□ 1.15
VARS-224ENST00000479051 SOX4Q06945 474 aaPredicted RBP22.24■■□□□ 1.15
VARS-224ENST00000479051 SPAG1Q07617 926 aa22.24■■□□□ 1.15
VARS-224ENST00000479051 DUSP6Q16828 381 aa22.24■■□□□ 1.15
VARS-224ENST00000479051 AAK1Q2M2I8 961 aa22.24■■□□□ 1.15
VARS-224ENST00000479051 USP41Q3LFD5 358 aa22.24■■□□□ 1.15
VARS-224ENST00000479051 CLEC17AQ6ZS10 378 aa22.24■■□□□ 1.15
VARS-224ENST00000479051 BRSK2Q8IWQ3 736 aa22.24■■□□□ 1.15
VARS-224ENST00000479051 HASPINQ8TF76 798 aa22.24■■□□□ 1.15
VARS-224ENST00000479051 PABPC5Q96DU9 382 aaKnown RBP22.24■■□□□ 1.15
VARS-224ENST00000479051 EMILIN2Q9BXX0 1053 aa22.24■■□□□ 1.15
VARS-224ENST00000479051 CLDND1Q9NY35 253 aa22.24■■□□□ 1.15
VARS-224ENST00000479051 RBAKQ9NYW8 714 aaPredicted RBP22.24■■□□□ 1.15
VARS-224ENST00000479051 HSPBP1Q9NZL4 362 aa22.24■■□□□ 1.15
VARS-224ENST00000479051 C2CD2Q9Y426 696 aa22.24■■□□□ 1.15
VARS-224ENST00000479051 MYO7AQ13402 2215 aa22.24■■□□□ 1.15
VARS-224ENST00000479051 GOLGA8IPA6NC78 632 aa22.23■■□□□ 1.15
VARS-224ENST00000479051 GOLGA8JA6NMD2 632 aa22.23■■□□□ 1.15
VARS-224ENST00000479051 HIDE1A8MVS5 230 aa22.23■■□□□ 1.15
VARS-224ENST00000479051 CRELD2Q6UXH1 353 aaPredicted RBP22.23■■□□□ 1.15
VARS-224ENST00000479051 NT5DC4Q86YG4 428 aa22.23■■□□□ 1.15
VARS-224ENST00000479051 RNF168Q8IYW5 571 aaPredicted RBP22.23■■□□□ 1.15
VARS-224ENST00000479051 GPR62Q9BZJ7 368 aa22.23■■□□□ 1.15
VARS-224ENST00000479051 UBE2ZQ9H832 354 aaPredicted RBP22.23■■□□□ 1.15
VARS-224ENST00000479051 TUBGCP4Q9UGJ1 667 aa22.23■■□□□ 1.15
VARS-224ENST00000479051 NUB1Q9Y5A7 615 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms