RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 CA14Q9ULX7 337 aa14.28□□□□□ -0.12
ABCF3-212ENST00000478288 GDAQ9Y2T3 454 aa14.28□□□□□ -0.12
ABCF3-212ENST00000478288 K7ERI5 159 aa14.27□□□□□ -0.13
ABCF3-212ENST00000478288 ADAM12O43184 909 aa14.27□□□□□ -0.13
ABCF3-212ENST00000478288 GRM5P41594 1212 aa14.27□□□□□ -0.13
ABCF3-212ENST00000478288 STARD6P59095 220 aa14.27□□□□□ -0.13
ABCF3-212ENST00000478288 DMP1Q13316 513 aaPredicted RBP14.27□□□□□ -0.13
ABCF3-212ENST00000478288 GNL2Q13823 731 aaKnown RBP14.27□□□□□ -0.13
ABCF3-212ENST00000478288 AXDND1Q5T1B0 1012 aaPredicted RBP14.27□□□□□ -0.13
ABCF3-212ENST00000478288 ALKAL1Q6UXT8 129 aa14.27□□□□□ -0.13
ABCF3-212ENST00000478288 ANKS3Q6ZW76 656 aa14.27□□□□□ -0.13
ABCF3-212ENST00000478288 KCTD17Q8N5Z5 321 aa14.27□□□□□ -0.13
ABCF3-212ENST00000478288 SLC7A14Q8TBB6 771 aa14.27□□□□□ -0.13
ABCF3-212ENST00000478288 FGF13Q92913 245 aa14.27□□□□□ -0.13
ABCF3-212ENST00000478288 FGF14Q92915 247 aa14.27□□□□□ -0.13
ABCF3-212ENST00000478288 DDX27Q96GQ7 796 aaKnown RBP14.27□□□□□ -0.13
ABCF3-212ENST00000478288 TMEM134Q9H6X4 195 aa14.27□□□□□ -0.13
ABCF3-212ENST00000478288 PTPRHQ9HD43 1115 aa14.27□□□□□ -0.13
ABCF3-212ENST00000478288 AVENQ9NQS1 362 aaPredicted RBP14.27□□□□□ -0.13
ABCF3-212ENST00000478288 DDX19AQ9NUU7 478 aaKnown RBP14.27□□□□□ -0.13
ABCF3-212ENST00000478288 ARHGAP28Q9P2N2 729 aa14.27□□□□□ -0.13
ABCF3-212ENST00000478288 KIAA1024Q9UPX6 916 aa14.27□□□□□ -0.13
ABCF3-212ENST00000478288 RBM19Q9Y4C8 960 aaKnown RBP14.27□□□□□ -0.13
ABCF3-212ENST00000478288 PATJQ8NI35 1801 aa14.27□□□□□ -0.13
ABCF3-212ENST00000478288 STK25O00506 426 aa14.26□□□□□ -0.13
ABCF3-212ENST00000478288 PROZP22891 400 aa14.26□□□□□ -0.13
ABCF3-212ENST00000478288 OR1D2P34982 312 aa14.26□□□□□ -0.13
ABCF3-212ENST00000478288 PRPHP41219 470 aa14.26□□□□□ -0.13
ABCF3-212ENST00000478288 NPTX2P47972 431 aa14.26□□□□□ -0.13
ABCF3-212ENST00000478288 CLCNKBP51801 687 aa14.26□□□□□ -0.13
ABCF3-212ENST00000478288 YARSP54577 528 aaKnown RBP14.26□□□□□ -0.13
ABCF3-212ENST00000478288 PRKCQQ04759 706 aa14.26□□□□□ -0.13
ABCF3-212ENST00000478288 GLRA4Q5JXX5 417 aa14.26□□□□□ -0.13
ABCF3-212ENST00000478288 SLC8B1Q6J4K2 584 aa14.26□□□□□ -0.13
ABCF3-212ENST00000478288 PARM1Q6UWI2 310 aa14.26□□□□□ -0.13
ABCF3-212ENST00000478288 CD300LGQ6UXG3 332 aa14.26□□□□□ -0.13
ABCF3-212ENST00000478288 FAM184AQ8NB25 1140 aa14.26□□□□□ -0.13
ABCF3-212ENST00000478288 PJA1Q8NG27 643 aa14.26□□□□□ -0.13
ABCF3-212ENST00000478288 SNX29Q8TEQ0 813 aa14.26□□□□□ -0.13
ABCF3-212ENST00000478288 DRC1Q96MC2 740 aa14.26□□□□□ -0.13
ABCF3-212ENST00000478288 ACO2Q99798 780 aaKnown RBP14.26□□□□□ -0.13
ABCF3-212ENST00000478288 DDX23Q9BUQ8 820 aaKnown RBP14.26□□□□□ -0.13
ABCF3-212ENST00000478288 TIPINQ9BVW5 301 aa14.26□□□□□ -0.13
ABCF3-212ENST00000478288 CCDC94Q9BW85 323 aaPredicted RBP14.26□□□□□ -0.13
ABCF3-212ENST00000478288 MRPL4Q9BYD3 311 aaKnown RBP14.26□□□□□ -0.13
ABCF3-212ENST00000478288 KCNG1Q9UIX4 513 aa14.26□□□□□ -0.13
ABCF3-212ENST00000478288 DNM3Q9UQ16 869 aa14.26□□□□□ -0.13
ABCF3-212ENST00000478288 USP20Q9Y2K6 914 aa14.26□□□□□ -0.13
ABCF3-212ENST00000478288 SIT1Q9Y3P8 196 aa14.26□□□□□ -0.13
ABCF3-212ENST00000478288 CDY1Q9Y6F8 540 aa14.26□□□□□ -0.13
ABCF3-212ENST00000478288 SMIM28A0A1B0GU29 152 aa14.25□□□□□ -0.13
ABCF3-212ENST00000478288 ARHGEF37A1IGU5 675 aa14.25□□□□□ -0.13
ABCF3-212ENST00000478288 SYN3O14994 580 aa14.25□□□□□ -0.13
ABCF3-212ENST00000478288 CCL16O15467 120 aa14.25□□□□□ -0.13
ABCF3-212ENST00000478288 SEC24BO95487 1268 aa14.25□□□□□ -0.13
ABCF3-212ENST00000478288 MCF2P10911 925 aa14.25□□□□□ -0.13
ABCF3-212ENST00000478288 KCNE1P15382 129 aa14.25□□□□□ -0.13
ABCF3-212ENST00000478288 LIG1P18858 919 aa14.25□□□□□ -0.13
ABCF3-212ENST00000478288 PFKPQ01813 784 aa14.25□□□□□ -0.13
ABCF3-212ENST00000478288 PTGDRQ13258 359 aa14.25□□□□□ -0.13
ABCF3-212ENST00000478288 ZNF568Q3ZCX4 644 aa14.25□□□□□ -0.13
ABCF3-212ENST00000478288 PABPC1LQ4VXU2 614 aaKnown RBP14.25□□□□□ -0.13
ABCF3-212ENST00000478288 KRT79Q5XKE5 535 aa14.25□□□□□ -0.13
ABCF3-212ENST00000478288 ZC3H14Q6PJT7 736 aaKnown RBP14.25□□□□□ -0.13
ABCF3-212ENST00000478288 RSPO2Q6UXX9 243 aaPredicted RBP14.25□□□□□ -0.13
ABCF3-212ENST00000478288 NPAS3Q8IXF0 933 aa14.25□□□□□ -0.13
ABCF3-212ENST00000478288 DAW1Q8N136 415 aa14.25□□□□□ -0.13
ABCF3-212ENST00000478288 ADSSL1Q8N142 457 aa14.25□□□□□ -0.13
ABCF3-212ENST00000478288 ZNF461Q8TAF7 563 aa14.25□□□□□ -0.13
ABCF3-212ENST00000478288 BORCS6Q96GS4 357 aa14.25□□□□□ -0.13
ABCF3-212ENST00000478288 NTPCRQ9BSD7 190 aaKnown RBP14.25□□□□□ -0.13
ABCF3-212ENST00000478288 OSBPL6Q9BZF3 934 aa14.25□□□□□ -0.13
ABCF3-212ENST00000478288 CDT1Q9H211 546 aa14.25□□□□□ -0.13
ABCF3-212ENST00000478288 GDE1Q9NZC3 331 aa14.25□□□□□ -0.13
ABCF3-212ENST00000478288 GUCY2CP25092 1073 aa14.24□□□□□ -0.13
ABCF3-212ENST00000478288 TKTP29401 623 aaKnown RBP14.24□□□□□ -0.13
ABCF3-212ENST00000478288 RPL9P32969 192 aaKnown RBP14.24□□□□□ -0.13
ABCF3-212ENST00000478288 MAGEA9P43362 315 aa14.24□□□□□ -0.13
ABCF3-212ENST00000478288 TOB1P50616 345 aaPredicted RBP14.24□□□□□ -0.13
ABCF3-212ENST00000478288 PEX3P56589 373 aa14.24□□□□□ -0.13
ABCF3-212ENST00000478288 GPC5P78333 572 aa14.24□□□□□ -0.13
ABCF3-212ENST00000478288 NTHL1P78549 312 aa14.24□□□□□ -0.13
ABCF3-212ENST00000478288 NBR1Q14596 966 aa14.24□□□□□ -0.13
ABCF3-212ENST00000478288 TAS1R3Q7RTX0 852 aa14.24□□□□□ -0.13
ABCF3-212ENST00000478288 C1orf210Q8IVY1 113 aa14.24□□□□□ -0.13
ABCF3-212ENST00000478288 C3orf58Q8NDZ4 430 aa14.24□□□□□ -0.13
ABCF3-212ENST00000478288 ITFG1Q8TB96 612 aa14.24□□□□□ -0.13
ABCF3-212ENST00000478288 RPP25Q9BUL9 199 aaKnown RBP14.24□□□□□ -0.13
ABCF3-212ENST00000478288 CNTN3Q9P232 1028 aa14.24□□□□□ -0.13
ABCF3-212ENST00000478288 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.24□□□□□ -0.13
ABCF3-212ENST00000478288 KANSL1LA0AUZ9 987 aa14.23□□□□□ -0.13
ABCF3-212ENST00000478288 CCDC169A6NNP5 214 aa14.23□□□□□ -0.13
ABCF3-212ENST00000478288 PODXLO00592 558 aa14.23□□□□□ -0.13
ABCF3-212ENST00000478288 ABLIM1O14639 778 aa14.23□□□□□ -0.13
ABCF3-212ENST00000478288 TBC1D4O60343 1298 aa14.23□□□□□ -0.13
ABCF3-212ENST00000478288 HIP1RO75146 1068 aa14.23□□□□□ -0.13
ABCF3-212ENST00000478288 ABLIM3O94929 683 aa14.23□□□□□ -0.13
ABCF3-212ENST00000478288 LMNAP02545 664 aaKnown RBP14.23□□□□□ -0.13
ABCF3-212ENST00000478288 DCNP07585 359 aaKnown RBP14.23□□□□□ -0.13
ABCF3-212ENST00000478288 SOX4Q06945 474 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms