RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 SLC10A6Q3KNW5 377 aa16.64■□□□□ 0.25
SEC13-215ENST00000477547 NOMO2Q5JPE7 1267 aa16.64■□□□□ 0.25
SEC13-215ENST00000477547 FAM186BQ8IYM0 893 aa16.64■□□□□ 0.25
SEC13-215ENST00000477547 CMTR2Q8IYT2 770 aaKnown RBP16.64■□□□□ 0.25
SEC13-215ENST00000477547 RSPH1Q8WYR4 309 aa16.64■□□□□ 0.25
SEC13-215ENST00000477547 CEP63Q96MT8 703 aa16.64■□□□□ 0.25
SEC13-215ENST00000477547 MED15Q96RN5 788 aa16.64■□□□□ 0.25
SEC13-215ENST00000477547 MKNK1Q9BUB5 465 aa16.64■□□□□ 0.25
SEC13-215ENST00000477547 CNTN3Q9P232 1028 aa16.64■□□□□ 0.25
SEC13-215ENST00000477547 PLXNA4Q9HCM2 1894 aa16.63■□□□□ 0.25
SEC13-215ENST00000477547 BDP1A6H8Y1 2624 aa16.63■□□□□ 0.25
SEC13-215ENST00000477547 TTC26A0AVF1 554 aa16.63■□□□□ 0.25
SEC13-215ENST00000477547 PTGESO14684 152 aa16.63■□□□□ 0.25
SEC13-215ENST00000477547 POMCP01189 267 aa16.63■□□□□ 0.25
SEC13-215ENST00000477547 AFF1P51825 1210 aaKnown RBP16.63■□□□□ 0.25
SEC13-215ENST00000477547 HTRA4P83105 476 aaPredicted RBP16.63■□□□□ 0.25
SEC13-215ENST00000477547 POU5F1Q01860 360 aaKnown RBP16.63■□□□□ 0.25
SEC13-215ENST00000477547 MYL5Q02045 173 aa16.63■□□□□ 0.25
SEC13-215ENST00000477547 GRIK3Q13003 919 aa16.63■□□□□ 0.25
SEC13-215ENST00000477547 AOPEPQ8N6M6 819 aa16.63■□□□□ 0.25
SEC13-215ENST00000477547 CASD1Q96PB1 797 aa16.63■□□□□ 0.25
SEC13-215ENST00000477547 CXCL16Q9H2A7 254 aa16.63■□□□□ 0.25
SEC13-215ENST00000477547 PLEKHA5Q9HAU0 1116 aa16.63■□□□□ 0.25
SEC13-215ENST00000477547 TBC1D13Q9NVG8 400 aa16.63■□□□□ 0.25
SEC13-215ENST00000477547 PLAGL2Q9UPG8 496 aa16.63■□□□□ 0.25
SEC13-215ENST00000477547 SCN1AP35498 2009 aa16.62■□□□□ 0.25
SEC13-215ENST00000477547 TSC2P49815 1807 aa16.62■□□□□ 0.25
SEC13-215ENST00000477547 LACTBL1A8MY62 500 aa16.62■□□□□ 0.25
SEC13-215ENST00000477547 MAPK13O15264 365 aa16.62■□□□□ 0.25
SEC13-215ENST00000477547 FGFR1OPO95684 399 aaKnown RBP16.62■□□□□ 0.25
SEC13-215ENST00000477547 NFICP08651 508 aa16.62■□□□□ 0.25
SEC13-215ENST00000477547 PSMC2P35998 433 aaKnown RBP16.62■□□□□ 0.25
SEC13-215ENST00000477547 RABGGTBP53611 331 aa16.62■□□□□ 0.25
SEC13-215ENST00000477547 WNT7BP56706 349 aa16.62■□□□□ 0.25
SEC13-215ENST00000477547 RNASELQ05823 741 aaKnown RBP16.62■□□□□ 0.25
SEC13-215ENST00000477547 SPAG1Q07617 926 aa16.62■□□□□ 0.25
SEC13-215ENST00000477547 BTG3Q14201 252 aaPredicted RBP16.62■□□□□ 0.25
SEC13-215ENST00000477547 PSMD6Q15008 389 aa16.62■□□□□ 0.25
SEC13-215ENST00000477547 CCDC40Q4G0X9 1142 aa16.62■□□□□ 0.25
SEC13-215ENST00000477547 LRSAM1Q6UWE0 723 aa16.62■□□□□ 0.25
SEC13-215ENST00000477547 CD302Q8IX05 232 aa16.62■□□□□ 0.25
SEC13-215ENST00000477547 ZNF689Q96CS4 500 aaPredicted RBP16.62■□□□□ 0.25
SEC13-215ENST00000477547 KIF12Q96FN5 646 aa16.62■□□□□ 0.25
SEC13-215ENST00000477547 SRRTQ9BXP5 876 aaKnown RBP16.62■□□□□ 0.25
SEC13-215ENST00000477547 TSPY26PQ9H489 355 aa16.62■□□□□ 0.25
SEC13-215ENST00000477547 PDE11AQ9HCR9 933 aa16.62■□□□□ 0.25
SEC13-215ENST00000477547 HCSTQ9UBK5 93 aa16.62■□□□□ 0.25
SEC13-215ENST00000477547 NFE2L3Q9Y4A8 694 aa16.62■□□□□ 0.25
SEC13-215ENST00000477547 INSL6Q9Y581 213 aa16.62■□□□□ 0.25
SEC13-215ENST00000477547 CHD7Q9P2D1 2997 aa16.62■□□□□ 0.25
SEC13-215ENST00000477547 KRT13P13646 458 aa16.61■□□□□ 0.25
SEC13-215ENST00000477547 KCNE1P15382 129 aa16.61■□□□□ 0.25
SEC13-215ENST00000477547 ZNF165P49910 485 aa16.61■□□□□ 0.25
SEC13-215ENST00000477547 ZNF445P59923 1031 aa16.61■□□□□ 0.25
SEC13-215ENST00000477547 TMEM132DQ14C87 1099 aa16.61■□□□□ 0.25
SEC13-215ENST00000477547 SURF1Q15526 300 aa16.61■□□□□ 0.25
SEC13-215ENST00000477547 XKR4Q5GH76 650 aa16.61■□□□□ 0.25
SEC13-215ENST00000477547 SPATA1Q5VX52 437 aa16.61■□□□□ 0.25
SEC13-215ENST00000477547 JADE1Q6IE81 842 aa16.61■□□□□ 0.25
SEC13-215ENST00000477547 ALKAL1Q6UXT8 129 aa16.61■□□□□ 0.25
SEC13-215ENST00000477547 INTS8Q75QN2 995 aaKnown RBP16.61■□□□□ 0.25
SEC13-215ENST00000477547 EFCAB13Q8IY85 973 aa16.61■□□□□ 0.25
SEC13-215ENST00000477547 GSTCDQ8NEC7 633 aa16.61■□□□□ 0.25
SEC13-215ENST00000477547 ENOX1Q8TC92 643 aaKnown RBP16.61■□□□□ 0.25
SEC13-215ENST00000477547 CCDC127Q96BQ5 260 aa16.61■□□□□ 0.25
SEC13-215ENST00000477547 ZMAT2Q96NC0 199 aaKnown RBP16.61■□□□□ 0.25
SEC13-215ENST00000477547 FNBP1Q96RU3 617 aa16.61■□□□□ 0.25
SEC13-215ENST00000477547 RAD9AQ99638 391 aa16.61■□□□□ 0.25
SEC13-215ENST00000477547 CGRRF1Q99675 332 aa16.61■□□□□ 0.25
SEC13-215ENST00000477547 BPIFA3Q9BQP9 254 aa16.61■□□□□ 0.25
SEC13-215ENST00000477547 ASB7Q9H672 318 aa16.61■□□□□ 0.25
SEC13-215ENST00000477547 ATG2AQ2TAZ0 1938 aa16.6■□□□□ 0.25
SEC13-215ENST00000477547 PTPRJQ12913 1337 aa16.6■□□□□ 0.25
SEC13-215ENST00000477547 SMIM28A0A1B0GU29 152 aa16.6■□□□□ 0.25
SEC13-215ENST00000477547 LCHNA4D1U4 455 aa16.6■□□□□ 0.25
SEC13-215ENST00000477547 THP07101 528 aa16.6■□□□□ 0.25
SEC13-215ENST00000477547 DLATP10515 647 aaKnown RBP16.6■□□□□ 0.25
SEC13-215ENST00000477547 BFSP1Q12934 665 aa16.6■□□□□ 0.25
SEC13-215ENST00000477547 DCAF17Q5H9S7 520 aaPredicted RBP16.6■□□□□ 0.25
SEC13-215ENST00000477547 LMBRD2Q68DH5 695 aaPredicted RBP16.6■□□□□ 0.25
SEC13-215ENST00000477547 USP37Q86T82 979 aa16.6■□□□□ 0.25
SEC13-215ENST00000477547 FAM114A1Q8IWE2 563 aa16.6■□□□□ 0.25
SEC13-215ENST00000477547 SP7Q8TDD2 431 aaPredicted RBP16.6■□□□□ 0.25
SEC13-215ENST00000477547 CNOT6LQ96LI5 555 aaKnown RBP16.6■□□□□ 0.25
SEC13-215ENST00000477547 MFSD14AQ96MC6 490 aa16.6■□□□□ 0.25
SEC13-215ENST00000477547 PPP1R10Q96QC0 940 aaKnown RBP16.6■□□□□ 0.25
SEC13-215ENST00000477547 NKX2-4Q9H2Z4 354 aa16.6■□□□□ 0.25
SEC13-215ENST00000477547 THAP9Q9H5L6 903 aa16.6■□□□□ 0.25
SEC13-215ENST00000477547 SLC38A7Q9NVC3 462 aa16.6■□□□□ 0.25
SEC13-215ENST00000477547 MIOSQ9NXC5 875 aa16.6■□□□□ 0.25
SEC13-215ENST00000477547 KANSL3Q9P2N6 904 aa16.6■□□□□ 0.25
SEC13-215ENST00000477547 TUBGCP4Q9UGJ1 667 aa16.6■□□□□ 0.25
SEC13-215ENST00000477547 DERAQ9Y315 318 aa16.6■□□□□ 0.25
SEC13-215ENST00000477547 C2CD2Q9Y426 696 aa16.6■□□□□ 0.25
SEC13-215ENST00000477547 PCDHA11Q9Y5I1 949 aa16.6■□□□□ 0.25
SEC13-215ENST00000477547 MRPL42Q9Y6G3 142 aaKnown RBP16.6■□□□□ 0.25
SEC13-215ENST00000477547 XIRP2A4UGR9 3374 aa16.6■□□□□ 0.25
SEC13-215ENST00000477547 LRRIQ3A6PVS8 624 aaPredicted RBP16.59■□□□□ 0.25
SEC13-215ENST00000477547 XPOTO43592 962 aaKnown RBP16.59■□□□□ 0.25
SEC13-215ENST00000477547 B4GALT3O60512 393 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms