RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 NAB2Q15742 525 aa14.26□□□□□ -0.13
TOP3A-205ENST00000477508 NFIL3Q16649 462 aa14.26□□□□□ -0.13
TOP3A-205ENST00000477508 ZBTB41Q5SVQ8 909 aa14.26□□□□□ -0.13
TOP3A-205ENST00000477508 CRELD2Q6UXH1 353 aaPredicted RBP14.26□□□□□ -0.13
TOP3A-205ENST00000477508 BRSK2Q8IWQ3 736 aa14.26□□□□□ -0.13
TOP3A-205ENST00000477508 SPPL3Q8TCT6 385 aa14.26□□□□□ -0.13
TOP3A-205ENST00000477508 GDPD5Q8WTR4 605 aa14.26□□□□□ -0.13
TOP3A-205ENST00000477508 MRPL38Q96DV4 380 aaKnown RBP14.26□□□□□ -0.13
TOP3A-205ENST00000477508 IGSF21Q96ID5 467 aa14.26□□□□□ -0.13
TOP3A-205ENST00000477508 FBXL18Q96ME1 805 aa14.26□□□□□ -0.13
TOP3A-205ENST00000477508 NUP62CLQ9H1M0 184 aa14.26□□□□□ -0.13
TOP3A-205ENST00000477508 PCIF1Q9H4Z3 704 aa14.26□□□□□ -0.13
TOP3A-205ENST00000477508 RBAKQ9NYW8 714 aaPredicted RBP14.26□□□□□ -0.13
TOP3A-205ENST00000477508 MAN1B1Q9UKM7 699 aa14.26□□□□□ -0.13
TOP3A-205ENST00000477508 UBQLN1Q9UMX0 589 aaKnown RBP14.26□□□□□ -0.13
TOP3A-205ENST00000477508 C2CD2Q9Y426 696 aa14.26□□□□□ -0.13
TOP3A-205ENST00000477508 CDH23Q9H251 3354 aa14.26□□□□□ -0.13
TOP3A-205ENST00000477508 RFXAPO00287 272 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 PSMA7O14818 248 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 CLIC2O15247 247 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 GRM6O15303 877 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 LPXNO60711 386 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 FOSL2P15408 326 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 IGFBP4P22692 258 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 PAX3P23760 479 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 MCM4P33991 863 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 PRCPP42785 496 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 CYP2J2P51589 502 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 MORC3Q14149 939 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 ZBTB6Q15916 424 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 CAMK4Q16566 473 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 GLRA4Q5JXX5 417 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 DCLRE1AQ6PJP8 1040 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 DDX53Q86TM3 631 aaKnown RBP14.25□□□□□ -0.13
TOP3A-205ENST00000477508 BEST2Q8NFU1 509 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 CACTINQ8WUQ7 758 aaKnown RBP14.25□□□□□ -0.13
TOP3A-205ENST00000477508 POF1BQ8WVV4 589 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 MYLIPQ8WY64 445 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 ERCC4Q92889 916 aaPredicted RBP14.25□□□□□ -0.13
TOP3A-205ENST00000477508 PPP2R3CQ969Q6 453 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 FAM212AQ96EL1 285 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 SAAL1Q96ER3 474 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 KIF12Q96FN5 646 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 ZMAT2Q96NC0 199 aaKnown RBP14.25□□□□□ -0.13
TOP3A-205ENST00000477508 TSG101Q99816 390 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 ALG13Q9NP73 1137 aaKnown RBP14.25□□□□□ -0.13
TOP3A-205ENST00000477508 NGRNQ9NPE2 291 aaKnown RBP14.25□□□□□ -0.13
TOP3A-205ENST00000477508 DMAC2Q9NW81 257 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 MAPK8IP1Q9UQF2 711 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 STXBP5LQ9Y2K9 1186 aa14.25□□□□□ -0.13
TOP3A-205ENST00000477508 NT5C1B-RDH14C9J2C7 533 aa14.24□□□□□ -0.13
TOP3A-205ENST00000477508 TMEM189-UBE2V1I3L0A0 370 aa14.24□□□□□ -0.13
TOP3A-205ENST00000477508 MEFVO15553 781 aaPredicted RBP14.24□□□□□ -0.13
TOP3A-205ENST00000477508 TRAPPC3O43617 180 aa14.24□□□□□ -0.13
TOP3A-205ENST00000477508 B4GALT3O60512 393 aa14.24□□□□□ -0.13
TOP3A-205ENST00000477508 EXOC3O60645 756 aa14.24□□□□□ -0.13
TOP3A-205ENST00000477508 TADA2AO75478 443 aa14.24□□□□□ -0.13
TOP3A-205ENST00000477508 NR3C1P04150 777 aa14.24□□□□□ -0.13
TOP3A-205ENST00000477508 PBX3P40426 434 aa14.24□□□□□ -0.13
TOP3A-205ENST00000477508 ELAVL2Q12926 359 aaKnown RBP14.24□□□□□ -0.13
TOP3A-205ENST00000477508 ADGRE1Q14246 886 aa14.24□□□□□ -0.13
TOP3A-205ENST00000477508 TMEM132DQ14C87 1099 aa14.24□□□□□ -0.13
TOP3A-205ENST00000477508 SNRNP35Q16560 246 aaKnown RBP14.24□□□□□ -0.13
TOP3A-205ENST00000477508 EDRF1Q3B7T1 1238 aa14.24□□□□□ -0.13
TOP3A-205ENST00000477508 TIGD5Q53EQ6 642 aa14.24□□□□□ -0.13
TOP3A-205ENST00000477508 CENPPQ6IPU0 288 aa14.24□□□□□ -0.13
TOP3A-205ENST00000477508 FOXR2Q6PJQ5 311 aa14.24□□□□□ -0.13
TOP3A-205ENST00000477508 ADSSL1Q8N142 457 aa14.24□□□□□ -0.13
TOP3A-205ENST00000477508 GPT2Q8TD30 523 aa14.24□□□□□ -0.13
TOP3A-205ENST00000477508 NOC3LQ8WTT2 800 aaKnown RBP14.24□□□□□ -0.13
TOP3A-205ENST00000477508 DHTKD1Q96HY7 919 aaPredicted RBP14.24□□□□□ -0.13
TOP3A-205ENST00000477508 CXCL16Q9H2A7 254 aa14.24□□□□□ -0.13
TOP3A-205ENST00000477508 TLR9Q9NR96 1032 aa14.24□□□□□ -0.13
TOP3A-205ENST00000477508 SSX2IPQ9Y2D8 614 aa14.24□□□□□ -0.13
TOP3A-205ENST00000477508 FRMD4BQ9Y2L6 1034 aa14.24□□□□□ -0.13
TOP3A-205ENST00000477508 PRG3Q9Y2Y8 225 aaPredicted RBP14.24□□□□□ -0.13
TOP3A-205ENST00000477508 MTCH2Q9Y6C9 303 aa14.24□□□□□ -0.13
TOP3A-205ENST00000477508 SF3B1O75533 1304 aaKnown RBP eCLIP14.23□□□□□ -0.13
TOP3A-205ENST00000477508 GOLGA8IPA6NC78 632 aa14.23□□□□□ -0.13
TOP3A-205ENST00000477508 CASTOR2A6NHX0 329 aa14.23□□□□□ -0.13
TOP3A-205ENST00000477508 GOLGA8JA6NMD2 632 aa14.23□□□□□ -0.13
TOP3A-205ENST00000477508 MAPK13O15264 365 aa14.23□□□□□ -0.13
TOP3A-205ENST00000477508 B3GAT3O94766 335 aa14.23□□□□□ -0.13
TOP3A-205ENST00000477508 LRPAP1P30533 357 aa14.23□□□□□ -0.13
TOP3A-205ENST00000477508 LRRC63Q05C16 580 aa14.23□□□□□ -0.13
TOP3A-205ENST00000477508 UPP1Q16831 310 aa14.23□□□□□ -0.13
TOP3A-205ENST00000477508 SPATA1Q5VX52 437 aa14.23□□□□□ -0.13
TOP3A-205ENST00000477508 JADE1Q6IE81 842 aa14.23□□□□□ -0.13
TOP3A-205ENST00000477508 USP37Q86T82 979 aa14.23□□□□□ -0.13
TOP3A-205ENST00000477508 GPR65Q8IYL9 337 aa14.23□□□□□ -0.13
TOP3A-205ENST00000477508 SMYD4Q8IYR2 804 aaPredicted RBP14.23□□□□□ -0.13
TOP3A-205ENST00000477508 ADAM28Q9UKQ2 775 aa14.23□□□□□ -0.13
TOP3A-205ENST00000477508 PDCD11Q14690 1871 aaKnown RBP14.23□□□□□ -0.13
TOP3A-205ENST00000477508 BICDL2A1A5D9 508 aa14.22□□□□□ -0.13
TOP3A-205ENST00000477508 FSD2A1L4K1 749 aa14.22□□□□□ -0.13
TOP3A-205ENST00000477508 NR2F2P24468 414 aa14.22□□□□□ -0.13
TOP3A-205ENST00000477508 CLCNKBP51801 687 aa14.22□□□□□ -0.13
TOP3A-205ENST00000477508 ENPEPQ07075 957 aa14.22□□□□□ -0.13
TOP3A-205ENST00000477508 PSMD6Q15008 389 aa14.22□□□□□ -0.13
TOP3A-205ENST00000477508 ZCWPW2Q504Y3 356 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms