RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 MAGEA9P43362 315 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 RARRES1P49788 294 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 ATXN1P54253 815 aaKnown RBP7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 ARHGAP8P85298 464 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 SPEM2Q0P670 501 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 SCRN1Q12765 414 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 NR5A1Q13285 461 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 PPP2R5DQ14738 602 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 EARS2Q5JPH6 523 aaKnown RBP7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 GPR65Q8IYL9 337 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 FAM177A1Q8N128 213 aaPredicted RBP7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 WASF1Q92558 559 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 PRIMPOLQ96LW4 560 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 CORO1BQ9BR76 489 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 PLA2G2FQ9BZM2 168 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 CXCL16Q9H2A7 254 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 PDZD7Q9H5P4 517 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 GOLGA2P5Q9HBQ8 144 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 ZSWIM6Q9HCJ5 1215 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 SPTBN2O15020 2390 aa7.37□□□□□ -1.23
RTFDC1-206ENST00000477485 NUP210Q8TEM1 1887 aaPredicted RBP7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 ZMYM2Q9UBW7 1377 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 ARHGEF35A5YM69 484 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 TTLL13PA6NNM8 815 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 TRAPPC3O43617 180 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 NEMFO60524 1076 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 ECI2O75521 394 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 MYL4P12829 197 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 BRCC3P46736 316 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 CLCNKBP51801 687 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 EVCP57679 992 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 OSTNP61366 133 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 POU5F1BQ06416 359 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 ADCY1Q08828 1119 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 SPIRE1Q08AE8 756 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 MTAPQ13126 283 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 RAB33AQ14088 237 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 TRIM29Q14134 588 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 MAPK6Q16659 721 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 ST3GAL2Q16842 350 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 SLC5A9Q2M3M2 681 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 TANGO2Q6ICL3 276 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 RSPO2Q6UXX9 243 aaPredicted RBP7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 PDZD4Q76G19 769 aaPredicted RBP7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 ELMOD1Q8N336 334 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 MCPH1Q8NEM0 835 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 NELL2Q99435 816 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 DDX23Q9BUQ8 820 aaKnown RBP7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 NFKBIZQ9BYH8 718 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 OSBPL6Q9BZF3 934 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 C2orf40Q9H1Z8 148 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 EPC1Q9H2F5 836 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 SLITRK6Q9H5Y7 841 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 CYP4F11Q9HBI6 524 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 ORC3Q9UBD5 711 aaPredicted RBP7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 MTRRQ9UBK8 725 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 GREB1Q4ZG55 1949 aa7.36□□□□□ -1.23
RTFDC1-206ENST00000477485 STK36Q9NRP7 1315 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 MAN2B1O00754 1011 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 TBC1D4O60343 1298 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 PAPLNO95428 1278 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 HARSP12081 509 aaKnown RBP7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 PTPN2P17706 415 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 FGFR3P22607 806 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 GDI1P31150 447 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 RPS9P46781 194 aaKnown RBP7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 YARSP54577 528 aaKnown RBP7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 NRLP54845 237 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 UVSSAQ2YD98 709 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 DCAF4L1Q3SXM0 396 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 PPM1JQ5JR12 505 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 CYP4A22Q5TCH4 519 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 EEF1DP3Q658K8 133 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 HEATR6Q6AI08 1181 aaKnown RBP7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 IQCEQ6IPM2 695 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 ANKS3Q6ZW76 656 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 APBB1IPQ7Z5R6 666 aaPredicted RBP7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 YAF2Q8IY57 180 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 ZBTB44Q8NCP5 570 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 FAM200AQ8TCP9 573 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 FAM3CQ92520 227 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 DNASE1L2Q92874 299 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 ELSPBP1Q96BH3 223 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 DDX27Q96GQ7 796 aaKnown RBP7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 BORCS6Q96GS4 357 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 IFT74Q96LB3 600 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 HSD17B14Q9BPX1 270 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 RTKNQ9BST9 563 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 KIFC3Q9BVG8 833 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 TRMT61BQ9BVS5 477 aaKnown RBP7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 ZFP14Q9HCL3 533 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 POLD4Q9HCU8 107 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 PARD6AQ9NPB6 346 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 GDE1Q9NZC3 331 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 KCNH3Q9ULD8 1083 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 NUB1Q9Y5A7 615 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms