RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 C11orf57Q6ZUT1 292 aaPredicted RBP17.25■□□□□ 0.35
COPS3-207ENST00000477299 SLC9A9Q8IVB4 645 aa17.25■□□□□ 0.35
COPS3-207ENST00000477299 ARNTL2Q8WYA1 636 aa17.25■□□□□ 0.35
COPS3-207ENST00000477299 KIF12Q96FN5 646 aa17.25■□□□□ 0.35
COPS3-207ENST00000477299 ZNF576Q9H609 170 aa17.25■□□□□ 0.35
COPS3-207ENST00000477299 TOPORSQ9NS56 1045 aaPredicted RBP17.25■□□□□ 0.35
COPS3-207ENST00000477299 RBAKQ9NYW8 714 aaPredicted RBP17.25■□□□□ 0.35
COPS3-207ENST00000477299 CGNQ9P2M7 1197 aaKnown RBP17.25■□□□□ 0.35
COPS3-207ENST00000477299 VWA8A3KMH1 1905 aa17.24■□□□□ 0.35
COPS3-207ENST00000477299 SYCE3A1L190 88 aa17.24■□□□□ 0.35
COPS3-207ENST00000477299 ZNF233A6NK53 670 aa17.24■□□□□ 0.35
COPS3-207ENST00000477299 NRP1O14786 923 aa17.24■□□□□ 0.35
COPS3-207ENST00000477299 PSMA7O14818 248 aa17.24■□□□□ 0.35
COPS3-207ENST00000477299 PPEF2O14830 753 aa17.24■□□□□ 0.35
COPS3-207ENST00000477299 ITGB1P05556 798 aa17.24■□□□□ 0.35
COPS3-207ENST00000477299 CTNNB1P35222 781 aa17.24■□□□□ 0.35
COPS3-207ENST00000477299 DLG4P78352 724 aa17.24■□□□□ 0.35
COPS3-207ENST00000477299 PPP2R3AQ06190 1150 aa17.24■□□□□ 0.35
COPS3-207ENST00000477299 CYP24A1Q07973 514 aa17.24■□□□□ 0.35
COPS3-207ENST00000477299 GRIK3Q13003 919 aa17.24■□□□□ 0.35
COPS3-207ENST00000477299 GRIN2CQ14957 1233 aa17.24■□□□□ 0.35
COPS3-207ENST00000477299 CD300LGQ6UXG3 332 aa17.24■□□□□ 0.35
COPS3-207ENST00000477299 KLHL23Q8NBE8 558 aa17.24■□□□□ 0.35
COPS3-207ENST00000477299 GOLGA5Q8TBA6 731 aa17.24■□□□□ 0.35
COPS3-207ENST00000477299 ZNF516Q92618 1163 aa17.24■□□□□ 0.35
COPS3-207ENST00000477299 MFSD14AQ96MC6 490 aa17.24■□□□□ 0.35
COPS3-207ENST00000477299 TGS1Q96RS0 853 aaKnown RBP17.24■□□□□ 0.35
COPS3-207ENST00000477299 MRPL9Q9BYD2 267 aaKnown RBP17.24■□□□□ 0.35
COPS3-207ENST00000477299 ALG13Q9NP73 1137 aaKnown RBP17.24■□□□□ 0.35
COPS3-207ENST00000477299 KANSL3Q9P2N6 904 aa17.24■□□□□ 0.35
COPS3-207ENST00000477299 PRG3Q9Y2Y8 225 aaPredicted RBP17.24■□□□□ 0.35
COPS3-207ENST00000477299 CSPG5O95196 566 aa17.23■□□□□ 0.35
COPS3-207ENST00000477299 DNAJB1P25685 340 aa17.23■□□□□ 0.35
COPS3-207ENST00000477299 OR1G1P47890 313 aa17.23■□□□□ 0.35
COPS3-207ENST00000477299 PAK1Q13153 545 aa17.23■□□□□ 0.35
COPS3-207ENST00000477299 STIM1Q13586 685 aa17.23■□□□□ 0.35
COPS3-207ENST00000477299 NFIL3Q16649 462 aa17.23■□□□□ 0.35
COPS3-207ENST00000477299 KYAT1Q16773 422 aa17.23■□□□□ 0.35
COPS3-207ENST00000477299 EDRF1Q3B7T1 1238 aa17.23■□□□□ 0.35
COPS3-207ENST00000477299 C1orf220Q5T0J3 134 aa17.23■□□□□ 0.35
COPS3-207ENST00000477299 ZC3H3Q8IXZ2 948 aaKnown RBP17.23■□□□□ 0.35
COPS3-207ENST00000477299 MLKLQ8NB16 471 aa17.23■□□□□ 0.35
COPS3-207ENST00000477299 C3orf58Q8NDZ4 430 aa17.23■□□□□ 0.35
COPS3-207ENST00000477299 OR5B17Q8NGF7 314 aa17.23■□□□□ 0.35
COPS3-207ENST00000477299 CCDC127Q96BQ5 260 aa17.23■□□□□ 0.35
COPS3-207ENST00000477299 FAM193BQ96PV7 902 aaPredicted RBP17.23■□□□□ 0.35
COPS3-207ENST00000477299 VN1R3Q9BXE9 311 aa17.23■□□□□ 0.35
COPS3-207ENST00000477299 PLEKHA5Q9HAU0 1116 aa17.23■□□□□ 0.35
COPS3-207ENST00000477299 MARCH5Q9NX47 278 aa17.23■□□□□ 0.35
COPS3-207ENST00000477299 KIAA0391O15091 583 aaKnown RBP17.22■□□□□ 0.35
COPS3-207ENST00000477299 GRM6O15303 877 aa17.22■□□□□ 0.35
COPS3-207ENST00000477299 PTMSP20962 102 aa17.22■□□□□ 0.35
COPS3-207ENST00000477299 CLCNKBP51801 687 aa17.22■□□□□ 0.35
COPS3-207ENST00000477299 TYRO3Q06418 890 aa17.22■□□□□ 0.35
COPS3-207ENST00000477299 TUSC3Q13454 348 aa17.22■□□□□ 0.35
COPS3-207ENST00000477299 SASS6Q6UVJ0 657 aa17.22■□□□□ 0.35
COPS3-207ENST00000477299 SLC39A11Q8N1S5 342 aa17.22■□□□□ 0.35
COPS3-207ENST00000477299 HASPINQ8TF76 798 aa17.22■□□□□ 0.35
COPS3-207ENST00000477299 GDPD5Q8WTR4 605 aa17.22■□□□□ 0.35
COPS3-207ENST00000477299 TMEM174Q8WUU8 243 aa17.22■□□□□ 0.35
COPS3-207ENST00000477299 BORCS6Q96GS4 357 aa17.22■□□□□ 0.35
COPS3-207ENST00000477299 ZNF558Q96NG5 402 aa17.22■□□□□ 0.35
COPS3-207ENST00000477299 TSG101Q99816 390 aa17.22■□□□□ 0.35
COPS3-207ENST00000477299 FUCA2Q9BTY2 467 aa17.22■□□□□ 0.35
COPS3-207ENST00000477299 GTPBP4Q9BZE4 634 aaKnown RBP17.22■□□□□ 0.35
COPS3-207ENST00000477299 PRDM12Q9H4Q4 367 aa17.22■□□□□ 0.35
COPS3-207ENST00000477299 FAN1Q9Y2M0 1017 aa17.22■□□□□ 0.35
COPS3-207ENST00000477299 CDH23Q9H251 3354 aa17.21■□□□□ 0.35
COPS3-207ENST00000477299 LPXNO60711 386 aa17.21■□□□□ 0.35
COPS3-207ENST00000477299 IL18RAPO95256 599 aa17.21■□□□□ 0.35
COPS3-207ENST00000477299 ALDH2P05091 517 aa17.21■□□□□ 0.35
COPS3-207ENST00000477299 DLATP10515 647 aaKnown RBP17.21■□□□□ 0.35
COPS3-207ENST00000477299 TFAMQ00059 246 aaKnown RBP17.21■□□□□ 0.35
COPS3-207ENST00000477299 LRRC63Q05C16 580 aa17.21■□□□□ 0.35
COPS3-207ENST00000477299 CAMK1Q14012 370 aa17.21■□□□□ 0.35
COPS3-207ENST00000477299 TMEM132DQ14C87 1099 aa17.21■□□□□ 0.35
COPS3-207ENST00000477299 PSMD6Q15008 389 aa17.21■□□□□ 0.35
COPS3-207ENST00000477299 SKOR2Q2VWA4 1001 aaPredicted RBP17.21■□□□□ 0.35
COPS3-207ENST00000477299 SPATA1Q5VX52 437 aa17.21■□□□□ 0.35
COPS3-207ENST00000477299 TAS1R1Q7RTX1 841 aa17.21■□□□□ 0.35
COPS3-207ENST00000477299 FBXO22Q8NEZ5 403 aa17.21■□□□□ 0.35
COPS3-207ENST00000477299 SPPL3Q8TCT6 385 aa17.21■□□□□ 0.35
COPS3-207ENST00000477299 ELMO3Q96BJ8 720 aa17.21■□□□□ 0.35
COPS3-207ENST00000477299 SRRTQ9BXP5 876 aaKnown RBP17.21■□□□□ 0.35
COPS3-207ENST00000477299 DNAJC25Q9H1X3 360 aa17.21■□□□□ 0.35
COPS3-207ENST00000477299 ASB7Q9H672 318 aa17.21■□□□□ 0.35
COPS3-207ENST00000477299 KIAA1586Q9HCI6 787 aa17.21■□□□□ 0.35
COPS3-207ENST00000477299 RWDD2AQ9UIY3 292 aa17.21■□□□□ 0.35
COPS3-207ENST00000477299 PCDHGC5Q9Y5F6 944 aa17.21■□□□□ 0.35
COPS3-207ENST00000477299 LRRIQ3A6PVS8 624 aaPredicted RBP17.2■□□□□ 0.34
COPS3-207ENST00000477299 C5orf67F2Z3F1 127 aa17.2■□□□□ 0.34
COPS3-207ENST00000477299 I3L4J1 428 aa17.2■□□□□ 0.34
COPS3-207ENST00000477299 CETN3O15182 167 aa17.2■□□□□ 0.34
COPS3-207ENST00000477299 FGF18O76093 207 aa17.2■□□□□ 0.34
COPS3-207ENST00000477299 KIF4AO95239 1232 aa17.2■□□□□ 0.34
COPS3-207ENST00000477299 TRIM49P0CI25 452 aa17.2■□□□□ 0.34
COPS3-207ENST00000477299 TRIM49CP0CI26 452 aa17.2■□□□□ 0.34
COPS3-207ENST00000477299 LAG3P18627 525 aa17.2■□□□□ 0.34
COPS3-207ENST00000477299 BRCC3P46736 316 aa17.2■□□□□ 0.34
COPS3-207ENST00000477299 ALDH7A1P49419 539 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms