RNA–Protein interactions for RNA: ENST00000475605.1

CDPF1-206, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 2

Gene CDPF1, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-206ENST00000475605 MTRRQ9UBK8 725 aa17.33■□□□□ 0.36
CDPF1-206ENST00000475605 CDY1Q9Y6F8 540 aa17.33■□□□□ 0.36
CDPF1-206ENST00000475605 ZNF292O60281 2723 aa17.33■□□□□ 0.36
CDPF1-206ENST00000475605 FAM170BA6NMN3 283 aa17.32■□□□□ 0.36
CDPF1-206ENST00000475605 B3GAT3O94766 335 aa17.32■□□□□ 0.36
CDPF1-206ENST00000475605 CYP11B2P19099 503 aa17.32■□□□□ 0.36
CDPF1-206ENST00000475605 TKTP29401 623 aaKnown RBP17.32■□□□□ 0.36
CDPF1-206ENST00000475605 NAMPTP43490 491 aa17.32■□□□□ 0.36
CDPF1-206ENST00000475605 BRCC3P46736 316 aa17.32■□□□□ 0.36
CDPF1-206ENST00000475605 CLCNKBP51801 687 aa17.32■□□□□ 0.36
CDPF1-206ENST00000475605 HMGN5P82970 282 aaKnown RBP17.32■□□□□ 0.36
CDPF1-206ENST00000475605 GUCY1B3Q02153 619 aa17.32■□□□□ 0.36
CDPF1-206ENST00000475605 ECM1Q16610 540 aa17.32■□□□□ 0.36
CDPF1-206ENST00000475605 PABPC1LQ4VXU2 614 aaKnown RBP17.32■□□□□ 0.36
CDPF1-206ENST00000475605 NT5DC1Q5TFE4 455 aa17.32■□□□□ 0.36
CDPF1-206ENST00000475605 PDXDC1Q6P996 788 aa17.32■□□□□ 0.36
CDPF1-206ENST00000475605 C3orf58Q8NDZ4 430 aa17.32■□□□□ 0.36
CDPF1-206ENST00000475605 DEPTORQ8TB45 409 aa17.32■□□□□ 0.36
CDPF1-206ENST00000475605 RUBCNQ92622 972 aa17.32■□□□□ 0.36
CDPF1-206ENST00000475605 PPP1R10Q96QC0 940 aaKnown RBP17.32■□□□□ 0.36
CDPF1-206ENST00000475605 POLR3CQ9BUI4 534 aaPredicted RBP17.32■□□□□ 0.36
CDPF1-206ENST00000475605 PLA2G2FQ9BZM2 168 aa17.32■□□□□ 0.36
CDPF1-206ENST00000475605 SPATA6Q9NWH7 488 aaPredicted RBP17.32■□□□□ 0.36
CDPF1-206ENST00000475605 KIF3AQ9Y496 699 aa17.32■□□□□ 0.36
CDPF1-206ENST00000475605 DNAH14Q0VDD8 3507 aa17.32■□□□□ 0.36
CDPF1-206ENST00000475605 OTOGLQ3ZCN5 2332 aa17.32■□□□□ 0.36
CDPF1-206ENST00000475605 TRIP11Q15643 1979 aa17.31■□□□□ 0.36
CDPF1-206ENST00000475605 ARHGEF35A5YM69 484 aa17.31■□□□□ 0.36
CDPF1-206ENST00000475605 PRKCQQ04759 706 aa17.31■□□□□ 0.36
CDPF1-206ENST00000475605 ST3GAL1Q11201 340 aa17.31■□□□□ 0.36
CDPF1-206ENST00000475605 SLC5A9Q2M3M2 681 aa17.31■□□□□ 0.36
CDPF1-206ENST00000475605 UVSSAQ2YD98 709 aa17.31■□□□□ 0.36
CDPF1-206ENST00000475605 MCRS1Q96EZ8 462 aa17.31■□□□□ 0.36
CDPF1-206ENST00000475605 DDX27Q96GQ7 796 aaKnown RBP17.31■□□□□ 0.36
CDPF1-206ENST00000475605 BCO2Q9BYV7 579 aa17.31■□□□□ 0.36
CDPF1-206ENST00000475605 LTB4R2Q9NPC1 389 aa17.31■□□□□ 0.36
CDPF1-206ENST00000475605 TMEM189-UBE2V1I3L0A0 370 aa17.3■□□□□ 0.36
CDPF1-206ENST00000475605 LAMTOR5O43504 91 aa17.3■□□□□ 0.36
CDPF1-206ENST00000475605 POU2F2P09086 479 aa17.3■□□□□ 0.36
CDPF1-206ENST00000475605 RPA1P27694 616 aa17.3■□□□□ 0.36
CDPF1-206ENST00000475605 CSTF1Q05048 431 aaKnown RBP17.3■□□□□ 0.36
CDPF1-206ENST00000475605 SOX4Q06945 474 aaPredicted RBP17.3■□□□□ 0.36
CDPF1-206ENST00000475605 SAFBQ15424 915 aaKnown RBP eCLIP17.3■□□□□ 0.36
CDPF1-206ENST00000475605 ZNF174Q15697 407 aa17.3■□□□□ 0.36
CDPF1-206ENST00000475605 UPP1Q16831 310 aa17.3■□□□□ 0.36
CDPF1-206ENST00000475605 DGLUCYQ7Z3D6 616 aa17.3■□□□□ 0.36
CDPF1-206ENST00000475605 CEP120Q8N960 986 aa17.3■□□□□ 0.36
CDPF1-206ENST00000475605 MRPS23Q9Y3D9 190 aaKnown RBP17.3■□□□□ 0.36
CDPF1-206ENST00000475605 CACNA1AO00555 2505 aa17.3■□□□□ 0.36
CDPF1-206ENST00000475605 PATJQ8NI35 1801 aa17.3■□□□□ 0.36
CDPF1-206ENST00000475605 KINO60870 393 aaKnown RBP17.29■□□□□ 0.36
CDPF1-206ENST00000475605 RHOP08100 348 aa17.29■□□□□ 0.36
CDPF1-206ENST00000475605 TARSP26639 723 aaKnown RBP17.29■□□□□ 0.36
CDPF1-206ENST00000475605 DCAF4L1Q3SXM0 396 aa17.29■□□□□ 0.36
CDPF1-206ENST00000475605 ATF7IP2Q5U623 682 aa17.29■□□□□ 0.36
CDPF1-206ENST00000475605 ERMNQ8TAM6 284 aa17.29■□□□□ 0.36
CDPF1-206ENST00000475605 OSBPL6Q9BZF3 934 aa17.29■□□□□ 0.36
CDPF1-206ENST00000475605 KCNH3Q9ULD8 1083 aa17.29■□□□□ 0.36
CDPF1-206ENST00000475605 BACE2Q9Y5Z0 518 aa17.29■□□□□ 0.36
CDPF1-206ENST00000475605 GPR179Q6PRD1 2367 aa17.29■□□□□ 0.36
CDPF1-206ENST00000475605 SMIM28A0A1B0GU29 152 aa17.28■□□□□ 0.36
CDPF1-206ENST00000475605 SHISA7A6NL88 538 aa17.28■□□□□ 0.36
CDPF1-206ENST00000475605 NRG2O14511 850 aaPredicted RBP17.28■□□□□ 0.36
CDPF1-206ENST00000475605 OR52Z1P0C646 297 aa17.28■□□□□ 0.36
CDPF1-206ENST00000475605 CEBPBP17676 345 aa17.28■□□□□ 0.36
CDPF1-206ENST00000475605 OSTNP61366 133 aa17.28■□□□□ 0.36
CDPF1-206ENST00000475605 PFKPQ01813 784 aa17.28■□□□□ 0.36
CDPF1-206ENST00000475605 ROR1Q01973 937 aa17.28■□□□□ 0.36
CDPF1-206ENST00000475605 PPP2R5AQ15172 486 aa17.28■□□□□ 0.36
CDPF1-206ENST00000475605 ZNF528Q3MIS6 628 aa17.28■□□□□ 0.36
CDPF1-206ENST00000475605 TANGO2Q6ICL3 276 aa17.28■□□□□ 0.36
CDPF1-206ENST00000475605 TSSK4Q6SA08 328 aa17.28■□□□□ 0.36
CDPF1-206ENST00000475605 TPRG1Q6ZUI0 275 aa17.28■□□□□ 0.36
CDPF1-206ENST00000475605 ANKS3Q6ZW76 656 aa17.28■□□□□ 0.36
CDPF1-206ENST00000475605 TMX3Q96JJ7 454 aa17.28■□□□□ 0.36
CDPF1-206ENST00000475605 C8orf76Q96K31 380 aa17.28■□□□□ 0.36
CDPF1-206ENST00000475605 BHMT2Q9H2M3 363 aa17.28■□□□□ 0.36
CDPF1-206ENST00000475605 HEBP1Q9NRV9 189 aa17.28■□□□□ 0.36
CDPF1-206ENST00000475605 FBXO4Q9UKT5 387 aa17.28■□□□□ 0.36
CDPF1-206ENST00000475605 ECI2O75521 394 aa17.27■□□□□ 0.36
CDPF1-206ENST00000475605 ARPP19P56211 112 aa17.27■□□□□ 0.36
CDPF1-206ENST00000475605 FZD5Q13467 585 aa17.27■□□□□ 0.36
CDPF1-206ENST00000475605 GNL2Q13823 731 aaKnown RBP17.27■□□□□ 0.36
CDPF1-206ENST00000475605 PUM1Q14671 1186 aaKnown RBP eCLIP17.27■□□□□ 0.36
CDPF1-206ENST00000475605 ZBTB41Q5SVQ8 909 aa17.27■□□□□ 0.36
CDPF1-206ENST00000475605 CLDN23Q96B33 292 aa17.27■□□□□ 0.36
CDPF1-206ENST00000475605 IFT74Q96LB3 600 aa17.27■□□□□ 0.36
CDPF1-206ENST00000475605 UROC1Q96N76 676 aa17.27■□□□□ 0.36
CDPF1-206ENST00000475605 ZMAT2Q96NC0 199 aaKnown RBP17.27■□□□□ 0.36
CDPF1-206ENST00000475605 TNFSF13BQ9Y275 285 aa17.27■□□□□ 0.36
CDPF1-206ENST00000475605 WDR87Q6ZQQ6 2873 aa17.27■□□□□ 0.36
CDPF1-206ENST00000475605 DMXL1Q9Y485 3027 aa17.26■□□□□ 0.35
CDPF1-206ENST00000475605 WDR27A2RRH5 827 aa17.26■□□□□ 0.35
CDPF1-206ENST00000475605 K7ERI5 159 aa17.26■□□□□ 0.35
CDPF1-206ENST00000475605 TRAPPC3O43617 180 aa17.26■□□□□ 0.35
CDPF1-206ENST00000475605 ABLIM3O94929 683 aa17.26■□□□□ 0.35
CDPF1-206ENST00000475605 SEC24AO95486 1093 aa17.26■□□□□ 0.35
CDPF1-206ENST00000475605 PTPN2P17706 415 aa17.26■□□□□ 0.35
CDPF1-206ENST00000475605 CCT6AP40227 531 aaKnown RBP17.26■□□□□ 0.35
CDPF1-206ENST00000475605 EFNA5P52803 228 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms