RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 RAD51AP2Q09MP3 1159 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 HTR4Q13639 388 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 RABEP1Q15276 862 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 TMEM132AQ24JP5 1023 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 SLC10A6Q3KNW5 377 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 SEZ6Q53EL9 994 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 HYIQ5T013 277 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 AXDND1Q5T1B0 1012 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-207ENST00000475549 KRT79Q5XKE5 535 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 PARM1Q6UWI2 310 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 GRASPQ7Z6J2 395 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-207ENST00000475549 SYT2Q8N9I0 419 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-207ENST00000475549 TMEM161BQ8NDZ6 487 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 FLCNQ8NFG4 579 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 STAMQ92783 540 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 FGF14Q92915 247 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 C18orf25Q96B23 403 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-207ENST00000475549 ADPGKQ9BRR6 497 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 PIDD1Q9HB75 910 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 HCFC1R1Q9NWW0 138 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 DNMT3BQ9UBC3 853 aaKnown RBP7.71□□□□□ -1.18
HDAC3-207ENST00000475549 MTRRQ9UBK8 725 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 WNT16Q9UBV4 365 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 CDY1Q9Y6F8 540 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 NUMBLQ9Y6R0 609 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 VWA3AA6NCI4 1184 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 ABLIM3O94929 683 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 C8AP07357 584 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 HNRNPA1P09651 372 aaKnown RBP eCLIP7.7□□□□□ -1.18
HDAC3-207ENST00000475549 MAPTP10636 758 aaKnown RBP7.7□□□□□ -1.18
HDAC3-207ENST00000475549 MCF2P10911 925 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 SRFP11831 508 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 PLS3P13797 630 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 FSHRP23945 695 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 NBL1P41271 181 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 GPC5P78333 572 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 CREMQ03060 361 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 GRIN1Q05586 938 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 DMP1Q13316 513 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-207ENST00000475549 MRPL58Q14197 206 aaKnown RBP7.7□□□□□ -1.18
HDAC3-207ENST00000475549 ZRSR1Q15695 479 aaKnown RBP7.7□□□□□ -1.18
HDAC3-207ENST00000475549 TMEM119Q4V9L6 283 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 RILPL1Q5EBL4 403 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 MCTP1Q6DN14 999 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-207ENST00000475549 GET4Q7L5D6 327 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-207ENST00000475549 ASCL5Q7RTU5 278 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 CCDC105Q8IYK2 499 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 SLC7A14Q8TBB6 771 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 GPR152Q8TDT2 470 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 SPIRE2Q8WWL2 714 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 FGF13Q92913 245 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 DDX27Q96GQ7 796 aaKnown RBP7.7□□□□□ -1.18
HDAC3-207ENST00000475549 SNX27Q96L92 541 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 MRPL4Q9BYD3 311 aaKnown RBP7.7□□□□□ -1.18
HDAC3-207ENST00000475549 MFSD1Q9H3U5 465 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 KMT5AQ9NQR1 393 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 DLGAP2Q9P1A6 1054 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 CNTN3Q9P232 1028 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 RBM19Q9Y4C8 960 aaKnown RBP7.7□□□□□ -1.18
HDAC3-207ENST00000475549 BACE2Q9Y5Z0 518 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 STK24Q9Y6E0 443 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 PHLPP2Q6ZVD8 1323 aa7.7□□□□□ -1.18
HDAC3-207ENST00000475549 SHISA7A6NL88 538 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 PODXLO00592 558 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 FAM189A1O60320 539 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 TOM1L1O75674 476 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 SEC24AO95486 1093 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 PLA2G4BP0C869 781 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 GLULP15104 373 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 HOXA9P31269 272 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 SPAG1Q07617 926 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 ELAVL2Q12926 359 aaKnown RBP7.69□□□□□ -1.18
HDAC3-207ENST00000475549 ZBTB6Q15916 424 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 SLC5A9Q2M3M2 681 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 UVSSAQ2YD98 709 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 ZNF568Q3ZCX4 644 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 PPM1LQ5SGD2 360 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 VARS2Q5ST30 1063 aaKnown RBP7.69□□□□□ -1.18
HDAC3-207ENST00000475549 ZBTB41Q5SVQ8 909 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 SLC8B1Q6J4K2 584 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 ELMSAN1Q6PJG2 1045 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 MPZL3Q6UWV2 235 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 FRMD5Q7Z6J6 570 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 DTWD2Q8NBA8 298 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 ZNF461Q8TAF7 563 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 NXPE3Q969Y0 559 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 DRC1Q96MC2 740 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 UROC1Q96N76 676 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 ACAP3Q96P50 834 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 FIZ1Q96SL8 496 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 TCHPQ9BT92 498 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 RAB34Q9BZG1 259 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 C17orf75Q9HAS0 396 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 SLC2A4RGQ9NR83 387 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 BLOC1S4Q9NUP1 217 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 FBXL21Q9UKT6 434 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 CDH7Q9ULB5 785 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 CA14Q9ULX7 337 aa7.69□□□□□ -1.18
HDAC3-207ENST00000475549 POLIQ9UNA4 740 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms