RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 SLC12A3P55017 1021 aa12.98□□□□□ -0.33
CLIP2-204ENST00000474962 PEX3P56589 373 aa12.98□□□□□ -0.33
CLIP2-204ENST00000474962 NHLH1Q02575 133 aa12.98□□□□□ -0.33
CLIP2-204ENST00000474962 RAD51AP2Q09MP3 1159 aa12.98□□□□□ -0.33
CLIP2-204ENST00000474962 TUSC3Q13454 348 aa12.98□□□□□ -0.33
CLIP2-204ENST00000474962 HSP90AA2PQ14568 343 aaPredicted RBP12.98□□□□□ -0.33
CLIP2-204ENST00000474962 PPP2R5AQ15172 486 aa12.98□□□□□ -0.33
CLIP2-204ENST00000474962 NAB2Q15742 525 aa12.98□□□□□ -0.33
CLIP2-204ENST00000474962 PRSS55Q6UWB4 352 aaPredicted RBP12.98□□□□□ -0.33
CLIP2-204ENST00000474962 ALYREFQ86V81 257 aaKnown RBP12.98□□□□□ -0.33
CLIP2-204ENST00000474962 ZDHHC14Q8IZN3 488 aa12.98□□□□□ -0.33
CLIP2-204ENST00000474962 DAW1Q8N136 415 aa12.98□□□□□ -0.33
CLIP2-204ENST00000474962 FBXL6Q8N531 539 aa12.98□□□□□ -0.33
CLIP2-204ENST00000474962 SPDYE1Q8NFV5 336 aaPredicted RBP12.98□□□□□ -0.33
CLIP2-204ENST00000474962 DRC1Q96MC2 740 aa12.98□□□□□ -0.33
CLIP2-204ENST00000474962 RUSC1Q9BVN2 902 aa12.98□□□□□ -0.33
CLIP2-204ENST00000474962 ZHX3Q9H4I2 956 aa12.98□□□□□ -0.33
CLIP2-204ENST00000474962 MAGEF1Q9HAY2 307 aa12.98□□□□□ -0.33
CLIP2-204ENST00000474962 BLOC1S4Q9NUP1 217 aa12.98□□□□□ -0.33
CLIP2-204ENST00000474962 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.97□□□□□ -0.33
CLIP2-204ENST00000474962 TGM5O43548 720 aa12.97□□□□□ -0.33
CLIP2-204ENST00000474962 N4BP1O75113 896 aaKnown RBP12.97□□□□□ -0.33
CLIP2-204ENST00000474962 HIP1RO75146 1068 aa12.97□□□□□ -0.33
CLIP2-204ENST00000474962 TBCAO75347 108 aaKnown RBP12.97□□□□□ -0.33
CLIP2-204ENST00000474962 FAM13AO94988 1023 aa12.97□□□□□ -0.33
CLIP2-204ENST00000474962 GLUD1P00367 558 aa12.97□□□□□ -0.33
CLIP2-204ENST00000474962 NDUFA8P51970 172 aa12.97□□□□□ -0.33
CLIP2-204ENST00000474962 VCPP55072 806 aaKnown RBP12.97□□□□□ -0.33
CLIP2-204ENST00000474962 UBE2HP62256 183 aa12.97□□□□□ -0.33
CLIP2-204ENST00000474962 RTP2Q5QGT7 225 aa12.97□□□□□ -0.33
CLIP2-204ENST00000474962 ATF7IP2Q5U623 682 aa12.97□□□□□ -0.33
CLIP2-204ENST00000474962 FAM171A1Q5VUB5 890 aa12.97□□□□□ -0.33
CLIP2-204ENST00000474962 LILRA6Q6PI73 481 aa12.97□□□□□ -0.33
CLIP2-204ENST00000474962 CLEC17AQ6ZS10 378 aa12.97□□□□□ -0.33
CLIP2-204ENST00000474962 C1orf186Q6ZWK4 172 aa12.97□□□□□ -0.33
CLIP2-204ENST00000474962 CEP57Q86XR8 500 aa12.97□□□□□ -0.33
CLIP2-204ENST00000474962 SUGP1Q8IWZ8 645 aaKnown RBP12.97□□□□□ -0.33
CLIP2-204ENST00000474962 TDRD5Q8NAT2 981 aaKnown RBP12.97□□□□□ -0.33
CLIP2-204ENST00000474962 ADPGKQ9BRR6 497 aa12.97□□□□□ -0.33
CLIP2-204ENST00000474962 TNMDQ9H2S6 317 aa12.97□□□□□ -0.33
CLIP2-204ENST00000474962 SORCS3Q9UPU3 1222 aa12.97□□□□□ -0.33
CLIP2-204ENST00000474962 USTQ9Y2C2 406 aa12.97□□□□□ -0.33
CLIP2-204ENST00000474962 DMDP11532 3685 aa12.97□□□□□ -0.33
CLIP2-204ENST00000474962 MYO15AQ9UKN7 3530 aa12.97□□□□□ -0.33
CLIP2-204ENST00000474962 A0A087X0B3 334 aa12.96□□□□□ -0.33
CLIP2-204ENST00000474962 ZNF202O95125 648 aa12.96□□□□□ -0.33
CLIP2-204ENST00000474962 KIF4AO95239 1232 aa12.96□□□□□ -0.33
CLIP2-204ENST00000474962 SLFN14P0C7P3 912 aa12.96□□□□□ -0.33
CLIP2-204ENST00000474962 GUCY2CP25092 1073 aa12.96□□□□□ -0.33
CLIP2-204ENST00000474962 AVPR2P30518 371 aa12.96□□□□□ -0.33
CLIP2-204ENST00000474962 AFMP43652 599 aa12.96□□□□□ -0.33
CLIP2-204ENST00000474962 SMTNP53814 917 aa12.96□□□□□ -0.33
CLIP2-204ENST00000474962 OSTNP61366 133 aa12.96□□□□□ -0.33
CLIP2-204ENST00000474962 MTMR3Q13615 1198 aa12.96□□□□□ -0.33
CLIP2-204ENST00000474962 GLRA4Q5JXX5 417 aa12.96□□□□□ -0.33
CLIP2-204ENST00000474962 C15orf39Q6ZRI6 1047 aa12.96□□□□□ -0.33
CLIP2-204ENST00000474962 OTOP3Q7RTS5 596 aa12.96□□□□□ -0.33
CLIP2-204ENST00000474962 DYMQ7RTS9 669 aa12.96□□□□□ -0.33
CLIP2-204ENST00000474962 TAS1R3Q7RTX0 852 aa12.96□□□□□ -0.33
CLIP2-204ENST00000474962 UBALD2Q8IYN6 164 aa12.96□□□□□ -0.33
CLIP2-204ENST00000474962 PRSS33Q8NF86 280 aa12.96□□□□□ -0.33
CLIP2-204ENST00000474962 CMASQ8NFW8 434 aaPredicted RBP12.96□□□□□ -0.33
CLIP2-204ENST00000474962 LNX1Q8TBB1 728 aaPredicted RBP12.96□□□□□ -0.33
CLIP2-204ENST00000474962 ZNF707Q96C28 371 aaPredicted RBP12.96□□□□□ -0.33
CLIP2-204ENST00000474962 ACO2Q99798 780 aaKnown RBP12.96□□□□□ -0.33
CLIP2-204ENST00000474962 CLSTN3Q9BQT9 956 aa12.96□□□□□ -0.33
CLIP2-204ENST00000474962 TARS2Q9BW92 718 aaKnown RBP12.96□□□□□ -0.33
CLIP2-204ENST00000474962 KCNH6Q9H252 994 aa12.96□□□□□ -0.33
CLIP2-204ENST00000474962 C17orf75Q9HAS0 396 aa12.96□□□□□ -0.33
CLIP2-204ENST00000474962 FNIP2Q9P278 1114 aa12.96□□□□□ -0.33
CLIP2-204ENST00000474962 LARSQ9P2J5 1176 aaKnown RBP12.96□□□□□ -0.33
CLIP2-204ENST00000474962 SERTAD1Q9UHV2 236 aa12.96□□□□□ -0.33
CLIP2-204ENST00000474962 HOOK1Q9UJC3 728 aaKnown RBP12.96□□□□□ -0.33
CLIP2-204ENST00000474962 ODF2LQ9ULJ1 636 aa12.96□□□□□ -0.33
CLIP2-204ENST00000474962 TNFSF13BQ9Y275 285 aa12.96□□□□□ -0.33
CLIP2-204ENST00000474962 TDRD15B5MCY1 1934 aaKnown RBP12.96□□□□□ -0.34
CLIP2-204ENST00000474962 FAM237AA0A1B0GTK4 181 aa12.95□□□□□ -0.34
CLIP2-204ENST00000474962 ADAM12O43184 909 aa12.95□□□□□ -0.34
CLIP2-204ENST00000474962 KINO60870 393 aaKnown RBP12.95□□□□□ -0.34
CLIP2-204ENST00000474962 GADD45BO75293 160 aaPredicted RBP12.95□□□□□ -0.34
CLIP2-204ENST00000474962 IDEP14735 1019 aa12.95□□□□□ -0.34
CLIP2-204ENST00000474962 FAM160A1Q05DH4 1040 aa12.95□□□□□ -0.34
CLIP2-204ENST00000474962 MAPK7Q13164 816 aa12.95□□□□□ -0.34
CLIP2-204ENST00000474962 DMP1Q13316 513 aaPredicted RBP12.95□□□□□ -0.34
CLIP2-204ENST00000474962 E2F4Q16254 413 aa12.95□□□□□ -0.34
CLIP2-204ENST00000474962 DCAF4L1Q3SXM0 396 aa12.95□□□□□ -0.34
CLIP2-204ENST00000474962 CD300LGQ6UXG3 332 aa12.95□□□□□ -0.34
CLIP2-204ENST00000474962 CCDC149Q6ZUS6 474 aa12.95□□□□□ -0.34
CLIP2-204ENST00000474962 MYCT1Q8N699 235 aa12.95□□□□□ -0.34
CLIP2-204ENST00000474962 CEP120Q8N960 986 aa12.95□□□□□ -0.34
CLIP2-204ENST00000474962 SMG7Q92540 1137 aaKnown RBP12.95□□□□□ -0.34
CLIP2-204ENST00000474962 DDX12PQ92771 950 aa12.95□□□□□ -0.34
CLIP2-204ENST00000474962 STAMQ92783 540 aa12.95□□□□□ -0.34
CLIP2-204ENST00000474962 CCDC47Q96A33 483 aaKnown RBP12.95□□□□□ -0.34
CLIP2-204ENST00000474962 ACSF2Q96CM8 615 aaPredicted RBP12.95□□□□□ -0.34
CLIP2-204ENST00000474962 PHOX2BQ99453 314 aa12.95□□□□□ -0.34
CLIP2-204ENST00000474962 TTPALQ9BTX7 342 aa12.95□□□□□ -0.34
CLIP2-204ENST00000474962 TMEM134Q9H6X4 195 aa12.95□□□□□ -0.34
CLIP2-204ENST00000474962 KCNK12Q9HB15 430 aa12.95□□□□□ -0.34
CLIP2-204ENST00000474962 PARVGQ9HBI0 331 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms