RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.4■□□□□ 0.38
TPR-205ENST00000474852 BTAF1O14981 1849 aa17.4■□□□□ 0.38
TPR-205ENST00000474852 TAC1P20366 129 aa17.4■□□□□ 0.38
TPR-205ENST00000474852 GRIK3Q13003 919 aa17.4■□□□□ 0.38
TPR-205ENST00000474852 MORC4Q8TE76 937 aa17.4■□□□□ 0.38
TPR-205ENST00000474852 UTP4Q969X6 686 aaKnown RBP17.4■□□□□ 0.38
TPR-205ENST00000474852 MAGEB18Q96M61 343 aa17.4■□□□□ 0.38
TPR-205ENST00000474852 LARSQ9P2J5 1176 aaKnown RBP17.4■□□□□ 0.38
TPR-205ENST00000474852 NKX1-2Q9UD57 310 aaPredicted RBP17.4■□□□□ 0.38
TPR-205ENST00000474852 HAO1Q9UJM8 370 aa17.4■□□□□ 0.38
TPR-205ENST00000474852 ZNF831Q5JPB2 1677 aa17.4■□□□□ 0.38
TPR-205ENST00000474852 C10orf71Q711Q0 1435 aa17.4■□□□□ 0.38
TPR-205ENST00000474852 IPO5O00410 1097 aaKnown RBP17.4■□□□□ 0.38
TPR-205ENST00000474852 SLC16A4O15374 487 aa17.4■□□□□ 0.38
TPR-205ENST00000474852 ADRA2BP18089 450 aa17.4■□□□□ 0.38
TPR-205ENST00000474852 MTFR1Q15390 333 aa17.4■□□□□ 0.38
TPR-205ENST00000474852 ZYXQ15942 572 aaKnown RBP17.4■□□□□ 0.38
TPR-205ENST00000474852 ZNF449Q6P9G9 518 aa17.4■□□□□ 0.38
TPR-205ENST00000474852 HHIPL2Q6UWX4 724 aa17.4■□□□□ 0.38
TPR-205ENST00000474852 FBF1Q8TES7 1133 aa17.4■□□□□ 0.38
TPR-205ENST00000474852 ZNF483Q8TF39 744 aaPredicted RBP17.4■□□□□ 0.38
TPR-205ENST00000474852 GMCL1Q96IK5 515 aa17.4■□□□□ 0.38
TPR-205ENST00000474852 PLVAPQ9BX97 442 aa17.4■□□□□ 0.38
TPR-205ENST00000474852 UNC5CO95185 931 aa17.39■□□□□ 0.37
TPR-205ENST00000474852 SSTR3P32745 418 aaPredicted RBP17.39■□□□□ 0.37
TPR-205ENST00000474852 SSR1P43307 286 aaKnown RBP17.39■□□□□ 0.37
TPR-205ENST00000474852 WDR4P57081 412 aaKnown RBP17.39■□□□□ 0.37
TPR-205ENST00000474852 STRN3Q13033 797 aa17.39■□□□□ 0.37
TPR-205ENST00000474852 TCEAL1Q15170 157 aa17.39■□□□□ 0.37
TPR-205ENST00000474852 TMEM63BQ5T3F8 832 aa17.39■□□□□ 0.37
TPR-205ENST00000474852 CPA5Q8WXQ8 436 aa17.39■□□□□ 0.37
TPR-205ENST00000474852 PI4K2AQ9BTU6 479 aa17.39■□□□□ 0.37
TPR-205ENST00000474852 TRAIPQ9BWF2 469 aa17.39■□□□□ 0.37
TPR-205ENST00000474852 STRA6Q9BX79 667 aa17.39■□□□□ 0.37
TPR-205ENST00000474852 LRRC4BQ9NT99 713 aa17.39■□□□□ 0.37
TPR-205ENST00000474852 UVRAGQ9P2Y5 699 aa17.39■□□□□ 0.37
TPR-205ENST00000474852 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.39■□□□□ 0.37
TPR-205ENST00000474852 SPATA31A6Q5VVP1 1343 aa17.39■□□□□ 0.37
TPR-205ENST00000474852 CDH16O75309 829 aa17.39■□□□□ 0.37
TPR-205ENST00000474852 POLR2MP0CAP2 368 aa17.39■□□□□ 0.37
TPR-205ENST00000474852 MFAP3P55082 362 aa17.39■□□□□ 0.37
TPR-205ENST00000474852 SARNPP82979 210 aaKnown RBP17.39■□□□□ 0.37
TPR-205ENST00000474852 TAF11Q15544 211 aa17.39■□□□□ 0.37
TPR-205ENST00000474852 ZNF365Q70YC5 407 aa17.39■□□□□ 0.37
TPR-205ENST00000474852 SHC3Q92529 594 aa17.39■□□□□ 0.37
TPR-205ENST00000474852 KIFC3Q9BVG8 833 aa17.39■□□□□ 0.37
TPR-205ENST00000474852 TEKT3Q9BXF9 490 aa17.39■□□□□ 0.37
TPR-205ENST00000474852 ZMYND8Q9ULU4 1186 aaPredicted RBP17.39■□□□□ 0.37
TPR-205ENST00000474852 SUGT1Q9Y2Z0 365 aa17.39■□□□□ 0.37
TPR-205ENST00000474852 POC1B-GALNT4F8VUJ3 575 aa17.38■□□□□ 0.37
TPR-205ENST00000474852 H0Y3Z8 333 aa17.38■□□□□ 0.37
TPR-205ENST00000474852 RALAP11233 206 aa17.38■□□□□ 0.37
TPR-205ENST00000474852 STAT2P52630 851 aa17.38■□□□□ 0.37
TPR-205ENST00000474852 PEX3P56589 373 aa17.38■□□□□ 0.37
TPR-205ENST00000474852 IRX1P78414 480 aaPredicted RBP17.38■□□□□ 0.37
TPR-205ENST00000474852 CDR2Q01850 454 aa17.38■□□□□ 0.37
TPR-205ENST00000474852 PTK6Q13882 451 aa17.38■□□□□ 0.37
TPR-205ENST00000474852 C11orf91Q3C1V1 193 aa17.38■□□□□ 0.37
TPR-205ENST00000474852 C7orf43Q8WVR3 580 aa17.38■□□□□ 0.37
TPR-205ENST00000474852 ACCSQ96QU6 501 aa17.38■□□□□ 0.37
TPR-205ENST00000474852 DCLK3Q9C098 648 aa17.38■□□□□ 0.37
TPR-205ENST00000474852 ENO4A6NNW6 628 aa17.38■□□□□ 0.37
TPR-205ENST00000474852 IZUMO3Q5VZ72 239 aa17.38■□□□□ 0.37
TPR-205ENST00000474852 GSTA5Q7RTV2 222 aa17.38■□□□□ 0.37
TPR-205ENST00000474852 HAUS6Q7Z4H7 955 aa17.38■□□□□ 0.37
TPR-205ENST00000474852 C4orf33Q8N1A6 199 aa17.38■□□□□ 0.37
TPR-205ENST00000474852 GMCL1P1Q8NEA9 526 aa17.38■□□□□ 0.37
TPR-205ENST00000474852 TAS1R2Q8TE23 839 aa17.38■□□□□ 0.37
TPR-205ENST00000474852 PLCD4Q9BRC7 762 aa17.38■□□□□ 0.37
TPR-205ENST00000474852 TMEM206Q9H813 350 aa17.38■□□□□ 0.37
TPR-205ENST00000474852 BATF3Q9NR55 127 aa17.38■□□□□ 0.37
TPR-205ENST00000474852 KLHL11Q9NVR0 708 aa17.38■□□□□ 0.37
TPR-205ENST00000474852 ZNFX1Q9P2E3 1918 aaKnown RBP17.38■□□□□ 0.37
TPR-205ENST00000474852 PIK3CDO00329 1044 aa17.37■□□□□ 0.37
TPR-205ENST00000474852 IL9RQ01113 521 aa17.37■□□□□ 0.37
TPR-205ENST00000474852 CAPRIN2Q6IMN6 1127 aaKnown RBP17.37■□□□□ 0.37
TPR-205ENST00000474852 ARMC2Q8NEN0 867 aa17.37■□□□□ 0.37
TPR-205ENST00000474852 NGLY1Q96IV0 654 aa17.37■□□□□ 0.37
TPR-205ENST00000474852 CCNB1P14635 433 aa17.37■□□□□ 0.37
TPR-205ENST00000474852 SNRNP35Q16560 246 aaKnown RBP17.37■□□□□ 0.37
TPR-205ENST00000474852 RNF43Q68DV7 783 aa17.37■□□□□ 0.37
TPR-205ENST00000474852 MIER3Q7Z3K6 550 aa17.37■□□□□ 0.37
TPR-205ENST00000474852 SLCO2A1Q92959 643 aa17.37■□□□□ 0.37
TPR-205ENST00000474852 WDR11Q9BZH6 1224 aa17.37■□□□□ 0.37
TPR-205ENST00000474852 KCND2Q9NZV8 630 aa17.37■□□□□ 0.37
TPR-205ENST00000474852 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.37■□□□□ 0.37
TPR-205ENST00000474852 USTQ9Y2C2 406 aa17.37■□□□□ 0.37
TPR-205ENST00000474852 ADGRA3Q8IWK6 1321 aa17.37■□□□□ 0.37
TPR-205ENST00000474852 EXOC1LA0A1B0GW35 172 aa17.36■□□□□ 0.37
TPR-205ENST00000474852 FAM47DPA6NHR8 397 aa17.36■□□□□ 0.37
TPR-205ENST00000474852 ABL2P42684 1182 aa17.36■□□□□ 0.37
TPR-205ENST00000474852 SETDB1Q15047 1291 aa17.36■□□□□ 0.37
TPR-205ENST00000474852 ACAD10Q6JQN1 1059 aa17.36■□□□□ 0.37
TPR-205ENST00000474852 TATDN1Q6P1N9 297 aa17.36■□□□□ 0.37
TPR-205ENST00000474852 ATL2Q8NHH9 583 aa17.36■□□□□ 0.37
TPR-205ENST00000474852 ACER1Q8TDN7 264 aa17.36■□□□□ 0.37
TPR-205ENST00000474852 RBM15Q96T37 977 aaKnown RBP eCLIP17.36■□□□□ 0.374e-9■■□□□ 12.2
TPR-205ENST00000474852 LBHD1Q9BQE6 289 aaPredicted RBP17.36■□□□□ 0.37
TPR-205ENST00000474852 PHTF1Q9UMS5 762 aa17.36■□□□□ 0.37
TPR-205ENST00000474852 CHKBQ9Y259 395 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms