RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 CPSF3Q9UKF6 684 aaKnown RBP23.36■■□□□ 1.33
CCM2-206ENST00000474617 KRT5P13647 590 aa23.35■■□□□ 1.33
CCM2-206ENST00000474617 GABPB1Q06547 395 aaPredicted RBP23.35■■□□□ 1.33
CCM2-206ENST00000474617 DRP2Q13474 957 aa23.35■■□□□ 1.33
CCM2-206ENST00000474617 ATF7IP2Q5U623 682 aa23.35■■□□□ 1.33
CCM2-206ENST00000474617 IFT20Q8IY31 132 aa23.35■■□□□ 1.33
CCM2-206ENST00000474617 MAML3Q96JK9 1138 aa23.35■■□□□ 1.33
CCM2-206ENST00000474617 ZBTB45Q96K62 511 aaPredicted RBP23.35■■□□□ 1.33
CCM2-206ENST00000474617 PSMB7Q99436 277 aa23.35■■□□□ 1.33
CCM2-206ENST00000474617 PTPRHQ9HD43 1115 aa23.35■■□□□ 1.33
CCM2-206ENST00000474617 LCMT1Q9UIC8 334 aa23.35■■□□□ 1.33
CCM2-206ENST00000474617 TULP1O00294 542 aaPredicted RBP23.34■■□□□ 1.33
CCM2-206ENST00000474617 B4GALT4O60513 344 aa23.34■■□□□ 1.33
CCM2-206ENST00000474617 SEC31AO94979 1220 aaKnown RBP23.34■■□□□ 1.33
CCM2-206ENST00000474617 CELF2O95319 508 aaKnown RBP23.34■■□□□ 1.33
CCM2-206ENST00000474617 CLTAP09496 248 aa23.34■■□□□ 1.33
CCM2-206ENST00000474617 YWHAEP62258 255 aaKnown RBP23.34■■□□□ 1.33
CCM2-206ENST00000474617 NCOA4Q13772 614 aa23.34■■□□□ 1.33
CCM2-206ENST00000474617 CLEC16AQ2KHT3 1053 aa23.34■■□□□ 1.33
CCM2-206ENST00000474617 LINC01465Q8N7H1 131 aa23.34■■□□□ 1.33
CCM2-206ENST00000474617 COPS5Q92905 334 aa23.34■■□□□ 1.33
CCM2-206ENST00000474617 TATDN2Q93075 761 aa23.34■■□□□ 1.33
CCM2-206ENST00000474617 VCPIP1Q96JH7 1222 aa23.34■■□□□ 1.33
CCM2-206ENST00000474617 TINF2Q9BSI4 451 aa23.34■■□□□ 1.33
CCM2-206ENST00000474617 FAM124BQ9H5Z6 455 aaPredicted RBP23.34■■□□□ 1.33
CCM2-206ENST00000474617 ZSWIM8A7E2V4 1837 aa23.34■■□□□ 1.33
CCM2-206ENST00000474617 SPDYE4A6NLX3 237 aa23.33■■□□□ 1.33
CCM2-206ENST00000474617 ABLIM1O14639 778 aa23.33■■□□□ 1.33
CCM2-206ENST00000474617 ZEB2O60315 1214 aa23.33■■□□□ 1.33
CCM2-206ENST00000474617 VNN1O95497 513 aa23.33■■□□□ 1.33
CCM2-206ENST00000474617 NNTQ13423 1086 aa23.33■■□□□ 1.33
CCM2-206ENST00000474617 PCBP1Q15365 356 aaKnown RBP eCLIP23.33■■□□□ 1.33
CCM2-206ENST00000474617 SGSM1Q2NKQ1 1148 aa23.33■■□□□ 1.33
CCM2-206ENST00000474617 EMBQ6PCB8 327 aa23.33■■□□□ 1.33
CCM2-206ENST00000474617 APBB1IPQ7Z5R6 666 aaPredicted RBP23.33■■□□□ 1.33
CCM2-206ENST00000474617 LRRC71Q8N4P6 559 aa23.33■■□□□ 1.33
CCM2-206ENST00000474617 UBXN6Q9BZV1 441 aa23.33■■□□□ 1.33
CCM2-206ENST00000474617 WNT8AQ9H1J5 351 aa23.33■■□□□ 1.33
CCM2-206ENST00000474617 SLITRK6Q9H5Y7 841 aa23.33■■□□□ 1.33
CCM2-206ENST00000474617 RBM12Q9NTZ6 932 aaKnown RBP23.33■■□□□ 1.33
CCM2-206ENST00000474617 TAS2R14Q9NYV8 317 aa23.33■■□□□ 1.33
CCM2-206ENST00000474617 RRN3P2A6NIE6 340 aa23.33■■□□□ 1.32
CCM2-206ENST00000474617 ASS1P00966 412 aaKnown RBP23.33■■□□□ 1.32
CCM2-206ENST00000474617 MMEP08473 750 aa23.33■■□□□ 1.32
CCM2-206ENST00000474617 MCF2P10911 925 aa23.33■■□□□ 1.32
CCM2-206ENST00000474617 INSRRP14616 1297 aa23.33■■□□□ 1.32
CCM2-206ENST00000474617 NOP14P78316 857 aaKnown RBP23.33■■□□□ 1.32
CCM2-206ENST00000474617 MBTD1Q05BQ5 628 aa23.33■■□□□ 1.32
CCM2-206ENST00000474617 DGKDQ16760 1214 aa23.33■■□□□ 1.32
CCM2-206ENST00000474617 PALB2Q86YC2 1186 aa23.33■■□□□ 1.32
CCM2-206ENST00000474617 METTL13Q8N6R0 699 aa23.33■■□□□ 1.32
CCM2-206ENST00000474617 ARHGEF26Q96DR7 871 aa23.33■■□□□ 1.32
CCM2-206ENST00000474617 PCDHB18PQ96TA0 734 aa23.33■■□□□ 1.32
CCM2-206ENST00000474617 LRRC1Q9BTT6 524 aa23.33■■□□□ 1.32
CCM2-206ENST00000474617 OSGEPQ9NPF4 335 aa23.33■■□□□ 1.32
CCM2-206ENST00000474617 MANSC4A6NHS7 340 aaPredicted RBP23.32■■□□□ 1.32
CCM2-206ENST00000474617 INO80B-WBP1J3KQ70 363 aa23.32■■□□□ 1.32
CCM2-206ENST00000474617 CEP104O60308 925 aa23.32■■□□□ 1.32
CCM2-206ENST00000474617 SNAI1O95863 264 aaPredicted RBP23.32■■□□□ 1.32
CCM2-206ENST00000474617 TNNC2P02585 160 aa23.32■■□□□ 1.32
CCM2-206ENST00000474617 EPHB4P54760 987 aa23.32■■□□□ 1.32
CCM2-206ENST00000474617 CBX1P83916 185 aa23.32■■□□□ 1.32
CCM2-206ENST00000474617 ZNF568Q3ZCX4 644 aa23.32■■□□□ 1.32
CCM2-206ENST00000474617 ZNF410Q86VK4 478 aa23.32■■□□□ 1.32
CCM2-206ENST00000474617 NLRP4Q96MN2 994 aa23.32■■□□□ 1.32
CCM2-206ENST00000474617 PLVAPQ9BX97 442 aa23.32■■□□□ 1.32
CCM2-206ENST00000474617 INO80BQ9C086 356 aaPredicted RBP23.32■■□□□ 1.32
CCM2-206ENST00000474617 GOLGA6L10A0A0M3HER8 536 aa23.31■■□□□ 1.32
CCM2-206ENST00000474617 EDN1P05305 212 aa23.31■■□□□ 1.32
CCM2-206ENST00000474617 ACO1P21399 889 aaKnown RBP23.31■■□□□ 1.32
CCM2-206ENST00000474617 ACVR2BQ13705 512 aa23.31■■□□□ 1.32
CCM2-206ENST00000474617 CASP8Q14790 479 aa23.31■■□□□ 1.32
CCM2-206ENST00000474617 AFG1LQ8WV93 481 aa23.31■■□□□ 1.32
CCM2-206ENST00000474617 ANKRD36BP1Q96IX9 119 aa23.31■■□□□ 1.32
CCM2-206ENST00000474617 MS4A14Q96JA4 679 aa23.31■■□□□ 1.32
CCM2-206ENST00000474617 PKNOX2Q96KN3 472 aa23.31■■□□□ 1.32
CCM2-206ENST00000474617 C16orf70Q9BSU1 422 aa23.31■■□□□ 1.32
CCM2-206ENST00000474617 RNPEPQ9H4A4 650 aa23.31■■□□□ 1.32
CCM2-206ENST00000474617 MED4Q9NPJ6 270 aa23.31■■□□□ 1.32
CCM2-206ENST00000474617 PACSIN2Q9UNF0 486 aaPredicted RBP23.31■■□□□ 1.32
CCM2-206ENST00000474617 CCDC66A2RUB6 948 aa23.3■■□□□ 1.32
CCM2-206ENST00000474617 H3BRB1 525 aa23.3■■□□□ 1.32
CCM2-206ENST00000474617 SASH3O75995 380 aa23.3■■□□□ 1.32
CCM2-206ENST00000474617 UNGP13051 313 aaPredicted RBP23.3■■□□□ 1.32
CCM2-206ENST00000474617 PLA2G4AP47712 749 aa23.3■■□□□ 1.32
CCM2-206ENST00000474617 CENPCQ03188 943 aa23.3■■□□□ 1.32
CCM2-206ENST00000474617 TAF3Q5VWG9 929 aa23.3■■□□□ 1.32
CCM2-206ENST00000474617 NT5DC4Q86YG4 428 aa23.3■■□□□ 1.32
CCM2-206ENST00000474617 CCDC26Q8TAB7 109 aa23.3■■□□□ 1.32
CCM2-206ENST00000474617 ZNF653Q96CK0 615 aa23.3■■□□□ 1.32
CCM2-206ENST00000474617 PI4K2AQ9BTU6 479 aa23.3■■□□□ 1.32
CCM2-206ENST00000474617 TUT1Q9H6E5 874 aaKnown RBP23.3■■□□□ 1.32
CCM2-206ENST00000474617 ALG6Q9Y672 507 aa23.3■■□□□ 1.32
CCM2-206ENST00000474617 PTPRJQ12913 1337 aa23.3■■□□□ 1.32
CCM2-206ENST00000474617 DDX3YO15523 660 aaKnown RBP23.29■■□□□ 1.32
CCM2-206ENST00000474617 CYP1A1P04798 512 aaPredicted RBP23.29■■□□□ 1.32
CCM2-206ENST00000474617 SLC1A1P43005 524 aa23.29■■□□□ 1.32
CCM2-206ENST00000474617 INHBEP58166 350 aa23.29■■□□□ 1.32
CCM2-206ENST00000474617 TRPC3Q13507 836 aa23.29■■□□□ 1.32
CCM2-206ENST00000474617 SMC1AQ14683 1233 aaKnown RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms