RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 REXO2Q9Y3B8 237 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 TBKBP1A7MCY6 615 aa4.28□□□□□ -1.72
ECHDC1-213ENST00000474240 HTRA2O43464 458 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-213ENST00000474240 AKAP10O43572 662 aa4.28□□□□□ -1.72
ECHDC1-213ENST00000474240 FTH1P19P0C7X4 201 aa4.28□□□□□ -1.72
ECHDC1-213ENST00000474240 SPATA31D3P0C874 917 aa4.28□□□□□ -1.72
ECHDC1-213ENST00000474240 ATP5JP18859 108 aa4.28□□□□□ -1.72
ECHDC1-213ENST00000474240 KRT4P19013 534 aa4.28□□□□□ -1.72
ECHDC1-213ENST00000474240 KRTAP10-11P60412 298 aa4.28□□□□□ -1.72
ECHDC1-213ENST00000474240 MRPS21P82921 87 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-213ENST00000474240 CREMQ03060 361 aa4.28□□□□□ -1.72
ECHDC1-213ENST00000474240 GTF2H3Q13889 308 aa4.28□□□□□ -1.72
ECHDC1-213ENST00000474240 ACAP1Q15027 740 aa4.28□□□□□ -1.72
ECHDC1-213ENST00000474240 VPS72Q15906 364 aa4.28□□□□□ -1.72
ECHDC1-213ENST00000474240 BMT2Q1RMZ1 405 aa4.28□□□□□ -1.72
ECHDC1-213ENST00000474240 SPATA31D4Q6ZUB0 917 aa4.28□□□□□ -1.72
ECHDC1-213ENST00000474240 GPRIN1Q7Z2K8 1008 aa4.28□□□□□ -1.72
ECHDC1-213ENST00000474240 RHOT1Q8IXI2 618 aa4.28□□□□□ -1.72
ECHDC1-213ENST00000474240 JDP2Q8WYK2 163 aa4.28□□□□□ -1.72
ECHDC1-213ENST00000474240 TFAP2CQ92754 450 aa4.28□□□□□ -1.72
ECHDC1-213ENST00000474240 FAM167AQ96KS9 214 aa4.28□□□□□ -1.72
ECHDC1-213ENST00000474240 ZNF703Q9H7S9 590 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-213ENST00000474240 KMT5AQ9NQR1 393 aa4.28□□□□□ -1.72
ECHDC1-213ENST00000474240 GNL3LQ9NVN8 582 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-213ENST00000474240 PARPBPQ9NWS1 579 aa4.28□□□□□ -1.72
ECHDC1-213ENST00000474240 AJAP1Q9UKB5 411 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-213ENST00000474240 IPPQ9Y573 584 aa4.28□□□□□ -1.72
ECHDC1-213ENST00000474240 CCDC154A6NI56 674 aa4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 OFD1O75665 1012 aa4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 ZRANB2O95218 330 aaKnown RBP eCLIP4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 PF4V1P10720 104 aa4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 ZSCAN20P17040 1043 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 HSPA6P17066 643 aa4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 DDCP20711 480 aa4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 RAB27AP51159 221 aa4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 RABGGTBP53611 331 aa4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 CTXN1P60606 82 aa4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 MXRA7P84157 204 aa4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 FSTL1Q12841 308 aa4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 MTM1Q13496 603 aa4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 SEPT2Q15019 361 aa4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 DACT2Q5SW24 774 aa4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 NXNQ6DKJ4 435 aa4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 ARMC6Q6NXE6 501 aa4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 Q6ZPA2 131 aa4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 GADL1Q6ZQY3 521 aa4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 SEM1Q6ZVN7 128 aa4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 USP45Q70EL2 814 aa4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 TMPRSS6Q8IU80 811 aa4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 ELOA2Q8IYF1 753 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 AOPEPQ8N6M6 819 aa4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 MB21D1Q8N884 522 aa4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 MAP3K14Q99558 947 aa4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 NMRK2Q9NPI5 230 aa4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 ZIM2Q9NZV7 527 aa4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 IP6K2Q9UHH9 426 aa4.27□□□□□ -1.73
ECHDC1-213ENST00000474240 MYBBP1AQ9BQG0 1328 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 GAGE12BA1L429 117 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 GAGE12HA6NDE8 117 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 GOLGA6CA6NDK9 693 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 GOLGA6BA6NDN3 693 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 CXorf49A8MYA2 514 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 POMCP01189 267 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 POU2F2P09086 479 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 GOLGA6DP0CG33 693 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 RAP2AP10114 183 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 MTHFD1P11586 935 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 PDCP20941 246 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 SLC6A9P48067 706 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 FXR1P51114 621 aaKnown RBP eCLIP4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 ATP8B2P98198 1209 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 ODF1Q14990 250 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 PPP2R5AQ15172 486 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 NFE2Q16621 373 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 FAM214AQ32MH5 1076 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 ATXN7L2Q5T6C5 722 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 AFMIDQ63HM1 303 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 BHLHA9Q7RTU4 235 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 PLXDC1Q8IUK5 500 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 OR10H5Q8NGA6 315 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 CCHCR1Q8TD31 782 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 NSUN6Q8TEA1 469 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 JPH3Q8WXH2 748 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 MTFMTQ96DP5 389 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 FAM193BQ96PV7 902 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 MNTQ99583 582 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 MRI1Q9BV20 369 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 RHOBTB2Q9BYZ6 727 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 C11orf54Q9H0W9 315 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 GOLGA6AQ9NYA3 693 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 SIK3Q9Y2K2 1263 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 EID1Q9Y6B2 187 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 ZMYM3Q14202 1370 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 ATRNL1Q5VV63 1379 aa4.26□□□□□ -1.73
ECHDC1-213ENST00000474240 KLRG2A4D1S0 409 aaPredicted RBP4.25□□□□□ -1.73
ECHDC1-213ENST00000474240 ERC2O15083 957 aa4.25□□□□□ -1.73
ECHDC1-213ENST00000474240 STC2O76061 302 aa4.25□□□□□ -1.73
ECHDC1-213ENST00000474240 RRP1BQ14684 758 aaKnown RBP4.25□□□□□ -1.73
ECHDC1-213ENST00000474240 PGS1Q32NB8 556 aa4.25□□□□□ -1.73
ECHDC1-213ENST00000474240 MFSD14BQ5SR56 506 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms