RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 PRDM15P57071 1507 aaPredicted RBP6.59□□□□□ -1.35
RTF1-203ENST00000473214 CEP152O94986 1710 aa6.59□□□□□ -1.36
RTF1-203ENST00000473214 NWD1Q149M9 1564 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 AKR1B15C9JRZ8 316 aaPredicted RBP6.58□□□□□ -1.36
RTF1-203ENST00000473214 ACKR2O00590 384 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 KLHL41O60662 606 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 BBOX1O75936 387 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 FGF18O76093 207 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 TIAF1O95411 115 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 SGPL1O95470 568 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 APBB3O95704 486 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 HDCP19113 662 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 MSH2P43246 934 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 ARL4DP49703 201 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 AFF3P51826 1226 aaKnown RBP6.58□□□□□ -1.36
RTF1-203ENST00000473214 CASP6P55212 293 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 GPR85P60893 370 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 PTPN11Q06124 597 aaPredicted RBP6.58□□□□□ -1.36
RTF1-203ENST00000473214 WTAPQ15007 396 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 POLD3Q15054 466 aaPredicted RBP6.58□□□□□ -1.36
RTF1-203ENST00000473214 SURF1Q15526 300 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 NTRK3Q16288 839 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 ANO6Q4KMQ2 910 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 TAF3Q5VWG9 929 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 USP45Q70EL2 814 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 B4GALNT4Q76KP1 1039 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.58□□□□□ -1.36
RTF1-203ENST00000473214 DZIP1Q86YF9 867 aaKnown RBP6.58□□□□□ -1.36
RTF1-203ENST00000473214 RNF168Q8IYW5 571 aaPredicted RBP6.58□□□□□ -1.36
RTF1-203ENST00000473214 SMG8Q8ND04 991 aaKnown RBP6.58□□□□□ -1.36
RTF1-203ENST00000473214 ADAMTS15Q8TE58 950 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 FGD4Q96M96 766 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 HHIPQ96QV1 700 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 BTBD1Q9H0C5 482 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 SUGCTQ9HAC7 445 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 REV1Q9UBZ9 1251 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 MOSPD1Q9UJG1 213 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 COG5Q9UP83 839 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 TRIM17Q9Y577 477 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 CORINQ9Y5Q5 1042 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 LRRC9Q6ZRR7 1453 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 TET3O43151 1660 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 KDM5AP29375 1690 aaKnown RBP6.58□□□□□ -1.36
RTF1-203ENST00000473214 PIK3C2BO00750 1634 aa6.58□□□□□ -1.36
RTF1-203ENST00000473214 AHDC1Q5TGY3 1603 aaPredicted RBP6.58□□□□□ -1.36
RTF1-203ENST00000473214 FLT1P17948 1338 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 A0A0B4J203 849 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 LRRC14BA6NHZ5 514 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 PI4K2BG5E9Z4 385 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 TRAF5O00463 557 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 NOP56O00567 594 aaKnown RBP6.57□□□□□ -1.36
RTF1-203ENST00000473214 SGTAO43765 313 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 TSPAN3O60637 253 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 TRPA1O75762 1119 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 PLATP00750 562 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 CAPNS1P04632 268 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 GSNP06396 782 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 THP07101 528 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 HARSP12081 509 aaKnown RBP6.57□□□□□ -1.36
RTF1-203ENST00000473214 SCG2P13521 617 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 HNRNPLP14866 589 aaKnown RBP eCLIP6.57□□□□□ -1.36
RTF1-203ENST00000473214 ALOX15P16050 662 aaPredicted RBP6.57□□□□□ -1.36
RTF1-203ENST00000473214 PORP16435 677 aaPredicted RBP6.57□□□□□ -1.36
RTF1-203ENST00000473214 PDCP20941 246 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 C5AR1P21730 350 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 IFI35P80217 286 aaPredicted RBP6.57□□□□□ -1.36
RTF1-203ENST00000473214 GUCY1A3Q02108 690 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 KIF23Q02241 960 aaPredicted RBP6.57□□□□□ -1.36
RTF1-203ENST00000473214 ALDH6A1Q02252 535 aaKnown RBP6.57□□□□□ -1.36
RTF1-203ENST00000473214 EIF2B5Q13144 721 aaKnown RBP6.57□□□□□ -1.36
RTF1-203ENST00000473214 ADAM15Q13444 863 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 TSTQ16762 297 aaKnown RBP6.57□□□□□ -1.36
RTF1-203ENST00000473214 MPEG1Q2M385 716 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 TDRD10Q5VZ19 366 aaKnown RBP6.57□□□□□ -1.36
RTF1-203ENST00000473214 NUTM2GQ5VZR2 741 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 FIP1L1Q6UN15 594 aaKnown RBP6.57□□□□□ -1.36
RTF1-203ENST00000473214 ZNF783Q6ZMS7 281 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 CEP68Q76N32 757 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 NUP54Q7Z3B4 507 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 ZER1Q7Z7L7 766 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 SIAH1Q8IUQ4 282 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 CPOQ8IVL8 374 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 SULF2Q8IWU5 870 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 FBXL6Q8N531 539 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 IPMKQ8NFU5 416 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 MOSPD2Q8NHP6 518 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 SMCR8Q8TEV9 937 aaPredicted RBP6.57□□□□□ -1.36
RTF1-203ENST00000473214 BRI3BPQ8WY22 251 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 ZNF75CPQ92670 426 aaPredicted RBP6.57□□□□□ -1.36
RTF1-203ENST00000473214 USP6NLQ92738 828 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 ZUFSPQ96AP4 578 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 ACSF2Q96CM8 615 aaPredicted RBP6.57□□□□□ -1.36
RTF1-203ENST00000473214 CCDC43Q96MW1 224 aaKnown RBP6.57□□□□□ -1.36
RTF1-203ENST00000473214 ALPK1Q96QP1 1244 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 FNBP1Q96RU3 617 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 LRFN3Q9BTN0 628 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 MXD3Q9BW11 206 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 TEX13BQ9BXU2 312 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 TRIM5Q9C035 493 aa6.57□□□□□ -1.36
RTF1-203ENST00000473214 OR10A4Q9H209 315 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms