RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 TEX33O43247 280 aa7.31□□□□□ -1.24
CLK1-209ENST00000472679 FTLP02792 175 aaPredicted RBP7.31□□□□□ -1.24
CLK1-209ENST00000472679 RPLP2P05387 115 aaKnown RBP7.31□□□□□ -1.24
CLK1-209ENST00000472679 MALP21145 153 aa7.31□□□□□ -1.24
CLK1-209ENST00000472679 ACRV1P26436 265 aa7.31□□□□□ -1.24
CLK1-209ENST00000472679 CRHR2Q13324 411 aa7.31□□□□□ -1.24
CLK1-209ENST00000472679 METTL24Q5JXM2 366 aa7.31□□□□□ -1.24
CLK1-209ENST00000472679 ATXN7L2Q5T6C5 722 aaPredicted RBP7.31□□□□□ -1.24
CLK1-209ENST00000472679 DRICH1Q6PGQ1 229 aaPredicted RBP7.31□□□□□ -1.24
CLK1-209ENST00000472679 OR10H5Q8NGA6 315 aa7.31□□□□□ -1.24
CLK1-209ENST00000472679 EXTL1Q92935 676 aa7.31□□□□□ -1.24
CLK1-209ENST00000472679 RGMAQ96B86 450 aa7.31□□□□□ -1.24
CLK1-209ENST00000472679 ACO2Q99798 780 aaKnown RBP7.31□□□□□ -1.24
CLK1-209ENST00000472679 NDC1Q9BTX1 674 aa7.31□□□□□ -1.24
CLK1-209ENST00000472679 C11orf54Q9H0W9 315 aaPredicted RBP7.31□□□□□ -1.24
CLK1-209ENST00000472679 POGKQ9P215 609 aa7.31□□□□□ -1.24
CLK1-209ENST00000472679 TESMINQ9Y4I5 508 aa7.31□□□□□ -1.24
CLK1-209ENST00000472679 PCDHA3Q9Y5H8 950 aa7.31□□□□□ -1.24
CLK1-209ENST00000472679 SLC6A2P23975 617 aa7.3□□□□□ -1.24
CLK1-209ENST00000472679 SLC6A4P31645 630 aa7.3□□□□□ -1.24
CLK1-209ENST00000472679 HK3P52790 923 aa7.3□□□□□ -1.24
CLK1-209ENST00000472679 NOGQ13253 232 aa7.3□□□□□ -1.24
CLK1-209ENST00000472679 CNGB1Q14028 1251 aaPredicted RBP7.3□□□□□ -1.24
CLK1-209ENST00000472679 NAIF1Q69YI7 327 aaPredicted RBP7.3□□□□□ -1.24
CLK1-209ENST00000472679 C3orf20Q8ND61 904 aa7.3□□□□□ -1.24
CLK1-209ENST00000472679 ZFP28Q8NHY6 868 aa7.3□□□□□ -1.24
CLK1-209ENST00000472679 TTC8Q8TAM2 541 aa7.3□□□□□ -1.24
CLK1-209ENST00000472679 RUNDC1Q96C34 613 aa7.3□□□□□ -1.24
CLK1-209ENST00000472679 C1GALT1C1Q96EU7 318 aa7.3□□□□□ -1.24
CLK1-209ENST00000472679 TSC22D4Q9Y3Q8 395 aa7.3□□□□□ -1.24
CLK1-209ENST00000472679 DRGXA6NNA5 263 aa7.29□□□□□ -1.24
CLK1-209ENST00000472679 GRXCR1A8MXD5 290 aa7.29□□□□□ -1.24
CLK1-209ENST00000472679 B8ZZF3 427 aa7.29□□□□□ -1.24
CLK1-209ENST00000472679 NT5C1B-RDH14C9J2C7 533 aa7.29□□□□□ -1.24
CLK1-209ENST00000472679 KIAA0391O15091 583 aaKnown RBP7.29□□□□□ -1.24
CLK1-209ENST00000472679 GRM6O15303 877 aa7.29□□□□□ -1.24
CLK1-209ENST00000472679 CD1AP06126 327 aa7.29□□□□□ -1.24
CLK1-209ENST00000472679 APOBEC3AP31941 199 aaPredicted RBP7.29□□□□□ -1.24
CLK1-209ENST00000472679 CHN2P52757 468 aa7.29□□□□□ -1.24
CLK1-209ENST00000472679 UBXN2BQ14CS0 331 aa7.29□□□□□ -1.24
CLK1-209ENST00000472679 MINDY4Q4G0A6 757 aa7.29□□□□□ -1.24
CLK1-209ENST00000472679 DACT2Q5SW24 774 aa7.29□□□□□ -1.24
CLK1-209ENST00000472679 METRNLQ641Q3 311 aa7.29□□□□□ -1.24
CLK1-209ENST00000472679 ZBTB34Q8NCN2 500 aa7.29□□□□□ -1.24
CLK1-209ENST00000472679 IL17DQ8TAD2 202 aa7.29□□□□□ -1.24
CLK1-209ENST00000472679 PHACTR3Q96KR7 559 aa7.29□□□□□ -1.24
CLK1-209ENST00000472679 CGRRF1Q99675 332 aa7.29□□□□□ -1.24
CLK1-209ENST00000472679 CLCA2Q9UQC9 943 aa7.29□□□□□ -1.24
CLK1-209ENST00000472679 GOLGA6L6A8MZA4 724 aa7.28□□□□□ -1.24
CLK1-209ENST00000472679 MARCH6O60337 910 aa7.28□□□□□ -1.24
CLK1-209ENST00000472679 PRSS23O95084 383 aa7.28□□□□□ -1.24
CLK1-209ENST00000472679 POMCP01189 267 aa7.28□□□□□ -1.24
CLK1-209ENST00000472679 KRTAP10-2P60368 255 aa7.28□□□□□ -1.24
CLK1-209ENST00000472679 NHLH2Q02577 135 aa7.28□□□□□ -1.24
CLK1-209ENST00000472679 CREMQ03060 361 aa7.28□□□□□ -1.24
CLK1-209ENST00000472679 FLYWCH1Q4VC44 716 aa7.28□□□□□ -1.24
CLK1-209ENST00000472679 USP39Q53GS9 565 aaKnown RBP7.28□□□□□ -1.24
CLK1-209ENST00000472679 SLC4A10Q6U841 1118 aa7.28□□□□□ -1.24
CLK1-209ENST00000472679 MED25Q71SY5 747 aa7.28□□□□□ -1.24
CLK1-209ENST00000472679 HEATR3Q7Z4Q2 680 aa7.28□□□□□ -1.24
CLK1-209ENST00000472679 CAMKK1Q8N5S9 505 aa7.28□□□□□ -1.24
CLK1-209ENST00000472679 CDK5RAP1Q96SZ6 601 aaKnown RBP7.28□□□□□ -1.24
CLK1-209ENST00000472679 NEU1Q99519 415 aa7.28□□□□□ -1.24
CLK1-209ENST00000472679 LRFN3Q9BTN0 628 aa7.28□□□□□ -1.24
CLK1-209ENST00000472679 GSTO2Q9H4Y5 243 aa7.28□□□□□ -1.24
CLK1-209ENST00000472679 DDX20Q9UHI6 824 aaKnown RBP7.28□□□□□ -1.24
CLK1-209ENST00000472679 POLHQ9Y253 713 aa7.28□□□□□ -1.24
CLK1-209ENST00000472679 NR2E3Q9Y5X4 410 aa7.28□□□□□ -1.24
CLK1-209ENST00000472679 VSTM5A8MXK1 200 aa7.27□□□□□ -1.25
CLK1-209ENST00000472679 F2RL2O00254 374 aa7.27□□□□□ -1.25
CLK1-209ENST00000472679 SLC16A6O15403 523 aa7.27□□□□□ -1.25
CLK1-209ENST00000472679 CTNND1O60716 968 aaKnown RBP7.27□□□□□ -1.25
CLK1-209ENST00000472679 AMHP03971 560 aa7.27□□□□□ -1.25
CLK1-209ENST00000472679 U2AF1L5P0DN76 240 aaPredicted RBP7.27□□□□□ -1.25
CLK1-209ENST00000472679 ATF3P18847 181 aa7.27□□□□□ -1.25
CLK1-209ENST00000472679 U2AF1Q01081 240 aaKnown RBP eCLIP7.27□□□□□ -1.253e-7■■■■■ 27
CLK1-209ENST00000472679 PABPC1LQ4VXU2 614 aaKnown RBP7.27□□□□□ -1.25
CLK1-209ENST00000472679 THEMIS2Q5TEJ8 643 aa7.27□□□□□ -1.25
CLK1-209ENST00000472679 OVCH2Q7RTZ1 564 aa7.27□□□□□ -1.25
CLK1-209ENST00000472679 TMPRSS6Q8IU80 811 aa7.27□□□□□ -1.25
CLK1-209ENST00000472679 DENND1CQ8IV53 801 aa7.27□□□□□ -1.25
CLK1-209ENST00000472679 C1orf210Q8IVY1 113 aa7.27□□□□□ -1.25
CLK1-209ENST00000472679 PLBD2Q8NHP8 589 aa7.27□□□□□ -1.25
CLK1-209ENST00000472679 KMT5AQ9NQR1 393 aa7.27□□□□□ -1.25
CLK1-209ENST00000472679 FAM30AQ9NZY2 134 aa7.27□□□□□ -1.25
CLK1-209ENST00000472679 GABBR1Q9UBS5 961 aa7.27□□□□□ -1.25
CLK1-209ENST00000472679 ABCF2Q9UG63 623 aa7.27□□□□□ -1.25
CLK1-209ENST00000472679 H3BML4 177 aa7.26□□□□□ -1.25
CLK1-209ENST00000472679 PRRG2O14669 202 aa7.26□□□□□ -1.25
CLK1-209ENST00000472679 UBXN7O94888 489 aa7.26□□□□□ -1.25
CLK1-209ENST00000472679 ITGB1P05556 798 aa7.26□□□□□ -1.25
CLK1-209ENST00000472679 SMARCA1P28370 1054 aa7.26□□□□□ -1.25
CLK1-209ENST00000472679 BUD31P41223 144 aaPredicted RBP7.26□□□□□ -1.25
CLK1-209ENST00000472679 RNASE9P60153 205 aaKnown RBP7.26□□□□□ -1.25
CLK1-209ENST00000472679 TOB2Q14106 344 aaPredicted RBP7.26□□□□□ -1.25
CLK1-209ENST00000472679 ARHGAP29Q52LW3 1261 aa7.26□□□□□ -1.25
CLK1-209ENST00000472679 SH2D3CQ8N5H7 860 aa7.26□□□□□ -1.25
CLK1-209ENST00000472679 IL17RDQ8NFM7 739 aa7.26□□□□□ -1.25
CLK1-209ENST00000472679 TEX101Q9BY14 249 aa7.26□□□□□ -1.25
CLK1-209ENST00000472679 LMBRD1Q9NUN5 540 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms