RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 CCNT1O60563 726 aaKnown RBP10.35□□□□□ -0.75
VCL-204ENST00000472585 ERLIN2O94905 339 aa10.35□□□□□ -0.75
VCL-204ENST00000472585 KIF4AO95239 1232 aa10.35□□□□□ -0.75
VCL-204ENST00000472585 AXLP30530 894 aa10.35□□□□□ -0.75
VCL-204ENST00000472585 POU5F1BQ06416 359 aa10.35□□□□□ -0.75
VCL-204ENST00000472585 NCAPH2Q6IBW4 605 aa10.35□□□□□ -0.75
VCL-204ENST00000472585 PRR23CQ6ZRP0 262 aa10.35□□□□□ -0.75
VCL-204ENST00000472585 PIK3AP1Q6ZUJ8 805 aa10.35□□□□□ -0.75
VCL-204ENST00000472585 ZNF687Q8N1G0 1237 aa10.35□□□□□ -0.75
VCL-204ENST00000472585 TCP11Q8WWU5 503 aa10.35□□□□□ -0.75
VCL-204ENST00000472585 CLDN23Q96B33 292 aa10.35□□□□□ -0.75
VCL-204ENST00000472585 ZNF274Q96GC6 653 aaPredicted RBP10.35□□□□□ -0.75
VCL-204ENST00000472585 MTRQ99707 1265 aa10.35□□□□□ -0.75
VCL-204ENST00000472585 ZSWIM4Q9H7M6 989 aa10.35□□□□□ -0.75
VCL-204ENST00000472585 GPRC5CQ9NQ84 441 aa10.35□□□□□ -0.75
VCL-204ENST00000472585 PRMT8Q9NR22 394 aaPredicted RBP10.35□□□□□ -0.75
VCL-204ENST00000472585 SEMA4GQ9NTN9 838 aa10.35□□□□□ -0.75
VCL-204ENST00000472585 DNMT3BQ9UBC3 853 aaKnown RBP10.35□□□□□ -0.75
VCL-204ENST00000472585 PPME1Q9Y570 386 aa10.35□□□□□ -0.75
VCL-204ENST00000472585 TADA2AO75478 443 aa10.34□□□□□ -0.75
VCL-204ENST00000472585 CTDNEP1O95476 244 aa10.34□□□□□ -0.75
VCL-204ENST00000472585 HOXB3P14651 431 aaPredicted RBP10.34□□□□□ -0.75
VCL-204ENST00000472585 TARSP26639 723 aaKnown RBP10.34□□□□□ -0.75
VCL-204ENST00000472585 CREMQ03060 361 aa10.34□□□□□ -0.75
VCL-204ENST00000472585 ADCY1Q08828 1119 aa10.34□□□□□ -0.75
VCL-204ENST00000472585 SCRN1Q12765 414 aa10.34□□□□□ -0.75
VCL-204ENST00000472585 MTAPQ13126 283 aa10.34□□□□□ -0.75
VCL-204ENST00000472585 NR5A1Q13285 461 aa10.34□□□□□ -0.75
VCL-204ENST00000472585 HSP90AA2PQ14568 343 aaPredicted RBP10.34□□□□□ -0.75
VCL-204ENST00000472585 MXD4Q14582 209 aaPredicted RBP10.34□□□□□ -0.75
VCL-204ENST00000472585 CSRP2Q16527 193 aa10.34□□□□□ -0.75
VCL-204ENST00000472585 GALNT17Q6IS24 598 aa10.34□□□□□ -0.75
VCL-204ENST00000472585 OTUD6AQ7L8S5 288 aa10.34□□□□□ -0.75
VCL-204ENST00000472585 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.34□□□□□ -0.75
VCL-204ENST00000472585 NEK8Q86SG6 692 aa10.34□□□□□ -0.75
VCL-204ENST00000472585 EXOC8Q8IYI6 725 aa10.34□□□□□ -0.75
VCL-204ENST00000472585 TRIM22Q8IYM9 498 aa10.34□□□□□ -0.75
VCL-204ENST00000472585 PIGOQ8TEQ8 1089 aa10.34□□□□□ -0.75
VCL-204ENST00000472585 PIK3R5Q8WYR1 880 aa10.34□□□□□ -0.75
VCL-204ENST00000472585 TNFRSF25Q93038 417 aa10.34□□□□□ -0.75
VCL-204ENST00000472585 CCDC51Q96ER9 411 aa10.34□□□□□ -0.75
VCL-204ENST00000472585 KXD1Q9BQD3 176 aa10.34□□□□□ -0.75
VCL-204ENST00000472585 EIF2AK1Q9BQI3 630 aaKnown RBP10.34□□□□□ -0.75
VCL-204ENST00000472585 NFKBIZQ9BYH8 718 aa10.34□□□□□ -0.75
VCL-204ENST00000472585 SNTG2Q9NY99 539 aa10.34□□□□□ -0.75
VCL-204ENST00000472585 PARP2Q9UGN5 583 aa10.34□□□□□ -0.75
VCL-204ENST00000472585 POLIQ9UNA4 740 aa10.34□□□□□ -0.75
VCL-204ENST00000472585 FRYQ5TBA9 3013 aa10.34□□□□□ -0.75
VCL-204ENST00000472585 NOTCH4Q99466 2003 aa10.33□□□□□ -0.76
VCL-204ENST00000472585 F5P12259 2224 aa10.33□□□□□ -0.76
VCL-204ENST00000472585 TBX3O15119 743 aa10.33□□□□□ -0.76
VCL-204ENST00000472585 DKC1O60832 514 aaKnown RBP eCLIP10.33□□□□□ -0.76
VCL-204ENST00000472585 XYLBO75191 536 aa10.33□□□□□ -0.76
VCL-204ENST00000472585 LYPLA2O95372 231 aa10.33□□□□□ -0.76
VCL-204ENST00000472585 C8AP07357 584 aa10.33□□□□□ -0.76
VCL-204ENST00000472585 SPATA31C1P0DKV0 1188 aa10.33□□□□□ -0.76
VCL-204ENST00000472585 FDPSP14324 419 aaKnown RBP10.33□□□□□ -0.76
VCL-204ENST00000472585 PSMA5P28066 241 aa10.33□□□□□ -0.76
VCL-204ENST00000472585 PMLP29590 882 aa10.33□□□□□ -0.76
VCL-204ENST00000472585 RARRES1P49788 294 aa10.33□□□□□ -0.76
VCL-204ENST00000472585 GRIK3Q13003 919 aa10.33□□□□□ -0.76
VCL-204ENST00000472585 TUSC3Q13454 348 aa10.33□□□□□ -0.76
VCL-204ENST00000472585 SIM2Q14190 667 aaPredicted RBP10.33□□□□□ -0.76
VCL-204ENST00000472585 PCBP1Q15365 356 aaKnown RBP eCLIP10.33□□□□□ -0.76
VCL-204ENST00000472585 SLC5A9Q2M3M2 681 aa10.33□□□□□ -0.76
VCL-204ENST00000472585 PPM1LQ5SGD2 360 aa10.33□□□□□ -0.76
VCL-204ENST00000472585 N4BP2L1Q5TBK1 243 aaPredicted RBP10.33□□□□□ -0.76
VCL-204ENST00000472585 LIN9Q5TKA1 542 aa10.33□□□□□ -0.76
VCL-204ENST00000472585 FAM171A1Q5VUB5 890 aa10.33□□□□□ -0.76
VCL-204ENST00000472585 SLC27A1Q6PCB7 646 aa10.33□□□□□ -0.76
VCL-204ENST00000472585 MAEAQ7L5Y9 396 aa10.33□□□□□ -0.76
VCL-204ENST00000472585 CEP57Q86XR8 500 aa10.33□□□□□ -0.76
VCL-204ENST00000472585 NPAS3Q8IXF0 933 aa10.33□□□□□ -0.76
VCL-204ENST00000472585 ING5Q8WYH8 240 aa10.33□□□□□ -0.76
VCL-204ENST00000472585 BSNDQ8WZ55 320 aa10.33□□□□□ -0.76
VCL-204ENST00000472585 TTPALQ9BTX7 342 aa10.33□□□□□ -0.76
VCL-204ENST00000472585 FZD8Q9H461 694 aa10.33□□□□□ -0.76
VCL-204ENST00000472585 POLD4Q9HCU8 107 aa10.33□□□□□ -0.76
VCL-204ENST00000472585 NDRG2Q9UN36 371 aaKnown RBP10.33□□□□□ -0.76
VCL-204ENST00000472585 SDK1Q7Z5N4 2213 aa10.32□□□□□ -0.76
VCL-204ENST00000472585 CCDC194A0A1B0GVG4 234 aa10.32□□□□□ -0.76
VCL-204ENST00000472585 GDF9O60383 454 aa10.32□□□□□ -0.76
VCL-204ENST00000472585 PROS1P07225 676 aa10.32□□□□□ -0.76
VCL-204ENST00000472585 HNRNPA1P09651 372 aaKnown RBP eCLIP10.32□□□□□ -0.76
VCL-204ENST00000472585 TDGF1P13385 188 aa10.32□□□□□ -0.76
VCL-204ENST00000472585 GCFC2P16383 781 aaKnown RBP10.32□□□□□ -0.76
VCL-204ENST00000472585 OR1D2P34982 312 aa10.32□□□□□ -0.76
VCL-204ENST00000472585 CCR3P51677 355 aa10.32□□□□□ -0.76
VCL-204ENST00000472585 FOXK1P85037 733 aa10.32□□□□□ -0.76
VCL-204ENST00000472585 SHC2P98077 582 aa10.32□□□□□ -0.76
VCL-204ENST00000472585 RAB33AQ14088 237 aa10.32□□□□□ -0.76
VCL-204ENST00000472585 PSMD5Q16401 504 aa10.32□□□□□ -0.76
VCL-204ENST00000472585 AASDHQ4L235 1098 aaPredicted RBP10.32□□□□□ -0.76
VCL-204ENST00000472585 AXDND1Q5T1B0 1012 aaPredicted RBP10.32□□□□□ -0.76
VCL-204ENST00000472585 EEF1DP3Q658K8 133 aa10.32□□□□□ -0.76
VCL-204ENST00000472585 TANGO2Q6ICL3 276 aa10.32□□□□□ -0.76
VCL-204ENST00000472585 NOSTRINQ8IVI9 506 aa10.32□□□□□ -0.76
VCL-204ENST00000472585 C3orf58Q8NDZ4 430 aa10.32□□□□□ -0.76
VCL-204ENST00000472585 SLC7A14Q8TBB6 771 aa10.32□□□□□ -0.76
VCL-204ENST00000472585 IER2Q9BTL4 223 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms