RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 DKC1O60832 514 aaKnown RBP eCLIP16.11■□□□□ 0.17
UBXN11-213ENST00000472155 SHOX2O60902 331 aaPredicted RBP16.11■□□□□ 0.17
UBXN11-213ENST00000472155 UNGP13051 313 aaPredicted RBP16.11■□□□□ 0.17
UBXN11-213ENST00000472155 ACO1P21399 889 aaKnown RBP16.11■□□□□ 0.17
UBXN11-213ENST00000472155 PTGIRP43119 386 aa16.11■□□□□ 0.17
UBXN11-213ENST00000472155 STAT5BP51692 787 aa16.11■□□□□ 0.17
UBXN11-213ENST00000472155 GNGT1P63211 74 aa16.11■□□□□ 0.17
UBXN11-213ENST00000472155 TARBP2Q15633 366 aaKnown RBP16.11■□□□□ 0.17
UBXN11-213ENST00000472155 TMC3Q7Z5M5 1100 aa16.11■□□□□ 0.17
UBXN11-213ENST00000472155 RIOX2Q8IUF8 465 aa16.11■□□□□ 0.17
UBXN11-213ENST00000472155 CCDC26Q8TAB7 109 aa16.11■□□□□ 0.17
UBXN11-213ENST00000472155 ASCC2Q9H1I8 757 aaPredicted RBP16.11■□□□□ 0.17
UBXN11-213ENST00000472155 C1orf112Q9NSG2 853 aa16.11■□□□□ 0.17
UBXN11-213ENST00000472155 CALCOCO1Q9P1Z2 691 aa16.11■□□□□ 0.17
UBXN11-213ENST00000472155 GTF3C4Q9UKN8 822 aa16.11■□□□□ 0.17
UBXN11-213ENST00000472155 STYXL1Q9Y6J8 313 aa16.11■□□□□ 0.17
UBXN11-213ENST00000472155 MROH7Q68CQ1 1323 aa16.11■□□□□ 0.17
UBXN11-213ENST00000472155 MYO1FO00160 1098 aa16.1■□□□□ 0.17
UBXN11-213ENST00000472155 CLDN3O15551 220 aa16.1■□□□□ 0.17
UBXN11-213ENST00000472155 STAM2O75886 525 aa16.1■□□□□ 0.17
UBXN11-213ENST00000472155 SRGAP2CP0DJJ0 459 aa16.1■□□□□ 0.17
UBXN11-213ENST00000472155 EDNRBP24530 442 aa16.1■□□□□ 0.17
UBXN11-213ENST00000472155 GTF2H1P32780 548 aa16.1■□□□□ 0.17
UBXN11-213ENST00000472155 NAMPTP43490 491 aa16.1■□□□□ 0.17
UBXN11-213ENST00000472155 CLDN10P78369 228 aa16.1■□□□□ 0.17
UBXN11-213ENST00000472155 GUCY1A3Q02108 690 aa16.1■□□□□ 0.17
UBXN11-213ENST00000472155 GCNT1Q02742 428 aa16.1■□□□□ 0.17
UBXN11-213ENST00000472155 DHX9Q08211 1270 aaKnown RBP16.1■□□□□ 0.17
UBXN11-213ENST00000472155 ZNF844Q08AG5 666 aa16.1■□□□□ 0.17
UBXN11-213ENST00000472155 DUPD1Q68J44 220 aa16.1■□□□□ 0.17
UBXN11-213ENST00000472155 TMEM270Q6UE05 265 aa16.1■□□□□ 0.17
UBXN11-213ENST00000472155 CAPS2Q9BXY5 557 aa16.1■□□□□ 0.17
UBXN11-213ENST00000472155 CNTNAP2Q9UHC6 1331 aa16.1■□□□□ 0.17
UBXN11-213ENST00000472155 RSPH14Q9UHP6 348 aa16.1■□□□□ 0.17
UBXN11-213ENST00000472155 ANAPC7Q9UJX3 599 aa16.1■□□□□ 0.17
UBXN11-213ENST00000472155 ATP8A1Q9Y2Q0 1164 aa16.1■□□□□ 0.17
UBXN11-213ENST00000472155 UTP11Q9Y3A2 253 aaKnown RBP16.1■□□□□ 0.17
UBXN11-213ENST00000472155 BRCA2P51587 3418 aa16.1■□□□□ 0.17
UBXN11-213ENST00000472155 A0A0B4J269 797 aa16.1■□□□□ 0.17
UBXN11-213ENST00000472155 MTA2O94776 668 aa16.1■□□□□ 0.17
UBXN11-213ENST00000472155 RARAP10276 462 aa16.1■□□□□ 0.17
UBXN11-213ENST00000472155 PLTPP55058 493 aa16.1■□□□□ 0.17
UBXN11-213ENST00000472155 SIX1Q15475 284 aaPredicted RBP16.1■□□□□ 0.17
UBXN11-213ENST00000472155 MAGOHBQ96A72 148 aaKnown RBP16.1■□□□□ 0.17
UBXN11-213ENST00000472155 FAM212AQ96EL1 285 aa16.1■□□□□ 0.17
UBXN11-213ENST00000472155 FAM118BQ9BPY3 351 aa16.1■□□□□ 0.17
UBXN11-213ENST00000472155 ZDHHC18Q9NUE0 388 aa16.1■□□□□ 0.17
UBXN11-213ENST00000472155 ADGRA2Q96PE1 1338 aa16.09■□□□□ 0.17
UBXN11-213ENST00000472155 CTNNA1P35221 906 aaKnown RBP16.09■□□□□ 0.17
UBXN11-213ENST00000472155 TCEAL1Q15170 157 aa16.09■□□□□ 0.17
UBXN11-213ENST00000472155 GJC2Q5T442 439 aaPredicted RBP16.09■□□□□ 0.17
UBXN11-213ENST00000472155 ZDHHC24Q6UX98 284 aa16.09■□□□□ 0.17
UBXN11-213ENST00000472155 FBXO16Q8IX29 292 aaPredicted RBP16.09■□□□□ 0.17
UBXN11-213ENST00000472155 MCOLN2Q8IZK6 566 aa16.09■□□□□ 0.17
UBXN11-213ENST00000472155 UBL4BQ8N7F7 174 aa16.09■□□□□ 0.17
UBXN11-213ENST00000472155 FBXO25Q8TCJ0 367 aa16.09■□□□□ 0.17
UBXN11-213ENST00000472155 ERP44Q9BS26 406 aa16.09■□□□□ 0.17
UBXN11-213ENST00000472155 NIFKQ9BYG3 293 aaKnown RBP16.09■□□□□ 0.17
UBXN11-213ENST00000472155 CSADQ9Y600 493 aa16.09■□□□□ 0.17
UBXN11-213ENST00000472155 KIAA0391O15091 583 aaKnown RBP16.09■□□□□ 0.17
UBXN11-213ENST00000472155 CSDE1O75534 798 aaKnown RBP16.09■□□□□ 0.17
UBXN11-213ENST00000472155 HPDP32754 393 aaPredicted RBP16.09■□□□□ 0.17
UBXN11-213ENST00000472155 C1orf54Q8WWF1 131 aa16.09■□□□□ 0.17
UBXN11-213ENST00000472155 ATG4AQ8WYN0 398 aa16.09■□□□□ 0.17
UBXN11-213ENST00000472155 VTI1AQ96AJ9 217 aa16.09■□□□□ 0.17
UBXN11-213ENST00000472155 RPS6KC1Q96S38 1066 aa16.09■□□□□ 0.17
UBXN11-213ENST00000472155 C11orf70Q9BRQ4 267 aa16.09■□□□□ 0.17
UBXN11-213ENST00000472155 PDGFCQ9NRA1 345 aa16.09■□□□□ 0.17
UBXN11-213ENST00000472155 PPP2R3BQ9Y5P8 575 aa16.09■□□□□ 0.17
UBXN11-213ENST00000472155 SBF1O95248 1867 aa16.08■□□□□ 0.17
UBXN11-213ENST00000472155 ZBTB42B2RXF5 422 aa16.08■□□□□ 0.17
UBXN11-213ENST00000472155 SHBGP04278 402 aa16.08■□□□□ 0.17
UBXN11-213ENST00000472155 SCP2P22307 547 aa16.08■□□□□ 0.17
UBXN11-213ENST00000472155 RPL21P46778 160 aaKnown RBP16.08■□□□□ 0.17
UBXN11-213ENST00000472155 OSTNP61366 133 aa16.08■□□□□ 0.17
UBXN11-213ENST00000472155 IRX3P78415 501 aaPredicted RBP16.08■□□□□ 0.17
UBXN11-213ENST00000472155 WDR78Q5VTH9 848 aa16.08■□□□□ 0.17
UBXN11-213ENST00000472155 CHADLQ6NUI6 762 aa16.08■□□□□ 0.17
UBXN11-213ENST00000472155 CEP120Q8N960 986 aa16.08■□□□□ 0.17
UBXN11-213ENST00000472155 UHMK1Q8TAS1 419 aaKnown RBP16.08■□□□□ 0.17
UBXN11-213ENST00000472155 EPB41L4BQ9H329 900 aa16.08■□□□□ 0.17
UBXN11-213ENST00000472155 GRHL1Q9NZI5 618 aa16.08■□□□□ 0.17
UBXN11-213ENST00000472155 PCDHA3Q9Y5H8 950 aa16.08■□□□□ 0.17
UBXN11-213ENST00000472155 MIF4GDA9UHW6 222 aaKnown RBP16.08■□□□□ 0.16
UBXN11-213ENST00000472155 PHF2O75151 1096 aa16.08■□□□□ 0.16
UBXN11-213ENST00000472155 RPS6KA5O75582 802 aa16.08■□□□□ 0.16
UBXN11-213ENST00000472155 CTNNA2P26232 953 aa16.08■□□□□ 0.16
UBXN11-213ENST00000472155 SNX1Q13596 522 aa16.08■□□□□ 0.16
UBXN11-213ENST00000472155 CUL2Q13617 745 aa16.08■□□□□ 0.16
UBXN11-213ENST00000472155 ZNF394Q53GI3 561 aa16.08■□□□□ 0.16
UBXN11-213ENST00000472155 CCDC137Q6PK04 289 aaKnown RBP16.08■□□□□ 0.16
UBXN11-213ENST00000472155 ANKS1BQ7Z6G8 1248 aa16.08■□□□□ 0.16
UBXN11-213ENST00000472155 SLC13A5Q86YT5 568 aaPredicted RBP16.08■□□□□ 0.16
UBXN11-213ENST00000472155 ATP6V1G3Q96LB4 118 aa16.08■□□□□ 0.16
UBXN11-213ENST00000472155 PPP1R16BQ96T49 567 aa16.08■□□□□ 0.16
UBXN11-213ENST00000472155 BCCIPQ9P287 314 aaKnown RBP eCLIP16.08■□□□□ 0.16
UBXN11-213ENST00000472155 RBPJLQ9UBG7 517 aa16.08■□□□□ 0.16
UBXN11-213ENST00000472155 PCDHB4Q9Y5E5 795 aa16.08■□□□□ 0.16
UBXN11-213ENST00000472155 ADCY3O60266 1144 aa16.07■□□□□ 0.16
UBXN11-213ENST00000472155 ZEB2O60315 1214 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms