RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 VNN2O95498 520 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 PLA2G4BP0C869 781 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 MAPTP10636 758 aaKnown RBP8.87□□□□□ -0.99
USP48-207ENST00000471752 LAMP2P13473 410 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 GLULP15104 373 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 TNFSF9P41273 254 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 SLC12A3P55017 1021 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 ORC2Q13416 577 aaPredicted RBP8.87□□□□□ -0.99
USP48-207ENST00000471752 RABEP1Q15276 862 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 SLC10A6Q3KNW5 377 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 TMEM119Q4V9L6 283 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 DCLRE1AQ6PJP8 1040 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 C15orf39Q6ZRI6 1047 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 GET4Q7L5D6 327 aaPredicted RBP8.87□□□□□ -0.99
USP48-207ENST00000471752 GPIHBP1Q8IV16 184 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 UBALD2Q8IYN6 164 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 ZSWIM2Q8NEG5 633 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 ING5Q8WYH8 240 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 RSPH1Q8WYR4 309 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 KIFAP3Q92845 792 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 ATOH1Q92858 354 aaPredicted RBP8.87□□□□□ -0.99
USP48-207ENST00000471752 TCEAL4Q96EI5 215 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 DDX27Q96GQ7 796 aaKnown RBP8.87□□□□□ -0.99
USP48-207ENST00000471752 FAM84AQ96KN4 292 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 IFT74Q96LB3 600 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 PLA2G2FQ9BZM2 168 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 BLOC1S4Q9NUP1 217 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 DNMT3BQ9UBC3 853 aaKnown RBP8.87□□□□□ -0.99
USP48-207ENST00000471752 TUBGCP4Q9UGJ1 667 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 FBXW11Q9UKB1 542 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 CA14Q9ULX7 337 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 NOL7Q9UMY1 257 aaKnown RBP8.87□□□□□ -0.99
USP48-207ENST00000471752 CDY1Q9Y6F8 540 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 DNAH14Q0VDD8 3507 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 FAM186AA6NE01 2351 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 SF3B1O75533 1304 aaKnown RBP eCLIP8.86□□□□□ -0.996e-6■■□□□ 12.7
USP48-207ENST00000471752 KMT2EQ8IZD2 1858 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 ANHXE9PGG2 379 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 TBC1D4O60343 1298 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 NR1I2O75469 434 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 MUTP22033 750 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 PRPHP41219 470 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 GRM5P41594 1212 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 EFNA5P52803 228 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 ARPP19P56211 112 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 GPC5P78333 572 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 HTR4Q13639 388 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 MCM6Q14566 821 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 SLC5A9Q2M3M2 681 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 HYIQ5T013 277 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 AXDND1Q5T1B0 1012 aaPredicted RBP8.86□□□□□ -0.99
USP48-207ENST00000471752 KRT79Q5XKE5 535 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 HAUS3Q68CZ6 603 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 SLC39A4Q6P5W5 647 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 ASCL5Q7RTU5 278 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 FRMD5Q7Z6J6 570 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 HS6ST3Q8IZP7 471 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 SYT2Q8N9I0 419 aaPredicted RBP8.86□□□□□ -0.99
USP48-207ENST00000471752 SLC7A14Q8TBB6 771 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 GPR152Q8TDT2 470 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 ACSF2Q96CM8 615 aaPredicted RBP8.86□□□□□ -0.99
USP48-207ENST00000471752 SNX27Q96L92 541 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 NTPCRQ9BSD7 190 aaKnown RBP8.86□□□□□ -0.99
USP48-207ENST00000471752 PLEKHA4Q9H4M7 779 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 TMEM134Q9H6X4 195 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 PIDD1Q9HB75 910 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 KMT5AQ9NQR1 393 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 EPS15L1Q9UBC2 864 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 POLIQ9UNA4 740 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 DUSP12Q9UNI6 340 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 MTF2Q9Y483 593 aaPredicted RBP8.86□□□□□ -0.99
USP48-207ENST00000471752 TIMM13Q9Y5L4 95 aaPredicted RBP8.86□□□□□ -0.99
USP48-207ENST00000471752 CLIC4Q9Y696 253 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 NUMBLQ9Y6R0 609 aa8.86□□□□□ -0.99
USP48-207ENST00000471752 DOCK8Q8NF50 2099 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 NOTCH4Q99466 2003 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 SHISA7A6NL88 538 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 ANKRD63C9JTQ0 380 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 PODXLO00592 558 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 FAM189A1O60320 539 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 C8AP07357 584 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 DCNP07585 359 aaKnown RBP8.85□□□□□ -0.99
USP48-207ENST00000471752 OR4Q2P0C623 313 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 PLS3P13797 630 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 CD72P21854 359 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 FSHRP23945 695 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 GUCY2CP25092 1073 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 NMT1P30419 496 aaKnown RBP8.85□□□□□ -0.99
USP48-207ENST00000471752 CCR2P41597 374 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 PTPN5P54829 565 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 RAB33AQ14088 237 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 KARSQ15046 597 aaKnown RBP8.85□□□□□ -0.99
USP48-207ENST00000471752 PPP2R5AQ15172 486 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 DCAF4L1Q3SXM0 396 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 ZNF568Q3ZCX4 644 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 ZC2HC1CQ53FD0 456 aaPredicted RBP8.85□□□□□ -0.99
USP48-207ENST00000471752 LARP1BQ659C4 914 aaKnown RBP8.85□□□□□ -0.99
USP48-207ENST00000471752 MAMSTRQ6ZN01 415 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 HACE1Q8IYU2 909 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 HDAC7Q8WUI4 952 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms