RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 TLR9Q9NR96 1032 aa16.43■□□□□ 0.22
SNX13-205ENST00000471744 HSPBP1Q9NZL4 362 aa16.43■□□□□ 0.22
SNX13-205ENST00000471744 UBQLN1Q9UMX0 589 aaKnown RBP16.43■□□□□ 0.22
SNX13-205ENST00000471744 MTCH2Q9Y6C9 303 aa16.43■□□□□ 0.22
SNX13-205ENST00000471744 ZNF233A6NK53 670 aa16.42■□□□□ 0.22
SNX13-205ENST00000471744 LACTBL1A8MY62 500 aa16.42■□□□□ 0.22
SNX13-205ENST00000471744 NT5C1B-RDH14C9J2C7 533 aa16.42■□□□□ 0.22
SNX13-205ENST00000471744 CALUO43852 315 aaPredicted RBP16.42■□□□□ 0.22
SNX13-205ENST00000471744 CYP3A5P20815 502 aa16.42■□□□□ 0.22
SNX13-205ENST00000471744 RPL9P32969 192 aaKnown RBP16.42■□□□□ 0.22
SNX13-205ENST00000471744 STIM1Q13586 685 aa16.42■□□□□ 0.22
SNX13-205ENST00000471744 MYBPC2Q14324 1141 aa16.42■□□□□ 0.22
SNX13-205ENST00000471744 SURF1Q15526 300 aa16.42■□□□□ 0.22
SNX13-205ENST00000471744 ZBTB41Q5SVQ8 909 aa16.42■□□□□ 0.22
SNX13-205ENST00000471744 CRELD2Q6UXH1 353 aaPredicted RBP16.42■□□□□ 0.22
SNX13-205ENST00000471744 SLC9A9Q8IVB4 645 aa16.42■□□□□ 0.22
SNX13-205ENST00000471744 BRSK2Q8IWQ3 736 aa16.42■□□□□ 0.22
SNX13-205ENST00000471744 XXYLT1Q8NBI6 393 aa16.42■□□□□ 0.22
SNX13-205ENST00000471744 SAAL1Q96ER3 474 aa16.42■□□□□ 0.22
SNX13-205ENST00000471744 KIF12Q96FN5 646 aa16.42■□□□□ 0.22
SNX13-205ENST00000471744 FBXL18Q96ME1 805 aa16.42■□□□□ 0.22
SNX13-205ENST00000471744 KCTD10Q9H3F6 313 aa16.42■□□□□ 0.22
SNX13-205ENST00000471744 PCIF1Q9H4Z3 704 aa16.42■□□□□ 0.22
SNX13-205ENST00000471744 PRG3Q9Y2Y8 225 aaPredicted RBP16.42■□□□□ 0.22
SNX13-205ENST00000471744 C2CD2Q9Y426 696 aa16.42■□□□□ 0.22
SNX13-205ENST00000471744 CHD7Q9P2D1 2997 aa16.42■□□□□ 0.22
SNX13-205ENST00000471744 BRWD1Q9NSI6 2320 aa16.41■□□□□ 0.22
SNX13-205ENST00000471744 CASTOR2A6NHX0 329 aa16.41■□□□□ 0.22
SNX13-205ENST00000471744 TMEM189-UBE2V1I3L0A0 370 aa16.41■□□□□ 0.22
SNX13-205ENST00000471744 ELAVL2Q12926 359 aaKnown RBP16.41■□□□□ 0.22
SNX13-205ENST00000471744 DCLRE1AQ6PJP8 1040 aa16.41■□□□□ 0.22
SNX13-205ENST00000471744 TRIML1Q8N9V2 468 aa16.41■□□□□ 0.22
SNX13-205ENST00000471744 FAM212AQ96EL1 285 aa16.41■□□□□ 0.22
SNX13-205ENST00000471744 ZMAT2Q96NC0 199 aaKnown RBP16.41■□□□□ 0.22
SNX13-205ENST00000471744 CXCL16Q9H2A7 254 aa16.41■□□□□ 0.22
SNX13-205ENST00000471744 CLSTN2Q9H4D0 955 aa16.41■□□□□ 0.22
SNX13-205ENST00000471744 NGRNQ9NPE2 291 aaKnown RBP16.41■□□□□ 0.22
SNX13-205ENST00000471744 RBAKQ9NYW8 714 aaPredicted RBP16.41■□□□□ 0.22
SNX13-205ENST00000471744 ADAM28Q9UKQ2 775 aa16.41■□□□□ 0.22
SNX13-205ENST00000471744 TRAF3IP3Q9Y228 551 aa16.41■□□□□ 0.22
SNX13-205ENST00000471744 FSD2A1L4K1 749 aa16.4■□□□□ 0.22
SNX13-205ENST00000471744 CLIC2O15247 247 aa16.4■□□□□ 0.22
SNX13-205ENST00000471744 MEFVO15553 781 aaPredicted RBP16.4■□□□□ 0.22
SNX13-205ENST00000471744 TADA2AO75478 443 aa16.4■□□□□ 0.22
SNX13-205ENST00000471744 MBD3O95983 291 aa16.4■□□□□ 0.22
SNX13-205ENST00000471744 RPL13P26373 211 aaKnown RBP16.4■□□□□ 0.22
SNX13-205ENST00000471744 CYP2J2P51589 502 aa16.4■□□□□ 0.22
SNX13-205ENST00000471744 TMEM132DQ14C87 1099 aa16.4■□□□□ 0.22
SNX13-205ENST00000471744 ZBTB6Q15916 424 aa16.4■□□□□ 0.22
SNX13-205ENST00000471744 NFIL3Q16649 462 aa16.4■□□□□ 0.22
SNX13-205ENST00000471744 TMEM173Q86WV6 379 aaPredicted RBP16.4■□□□□ 0.22
SNX13-205ENST00000471744 BEST2Q8NFU1 509 aa16.4■□□□□ 0.22
SNX13-205ENST00000471744 NOC3LQ8WTT2 800 aaKnown RBP16.4■□□□□ 0.22
SNX13-205ENST00000471744 ERCC4Q92889 916 aaPredicted RBP16.4■□□□□ 0.22
SNX13-205ENST00000471744 NUP62CLQ9H1M0 184 aa16.4■□□□□ 0.22
SNX13-205ENST00000471744 NSUN3Q9H649 340 aaKnown RBP16.4■□□□□ 0.22
SNX13-205ENST00000471744 ENTPD7Q9NQZ7 604 aa16.4■□□□□ 0.22
SNX13-205ENST00000471744 MARCH5Q9NX47 278 aa16.4■□□□□ 0.22
SNX13-205ENST00000471744 KIAA1468Q9P260 1216 aa16.4■□□□□ 0.22
SNX13-205ENST00000471744 MAN1B1Q9UKM7 699 aa16.4■□□□□ 0.22
SNX13-205ENST00000471744 SSX2IPQ9Y2D8 614 aa16.4■□□□□ 0.22
SNX13-205ENST00000471744 SF3B1O75533 1304 aaKnown RBP eCLIP16.4■□□□□ 0.225e-6■■■■■ 69.1
SNX13-205ENST00000471744 GOLGA8IPA6NC78 632 aa16.39■□□□□ 0.21
SNX13-205ENST00000471744 GOLGA8JA6NMD2 632 aa16.39■□□□□ 0.21
SNX13-205ENST00000471744 FSCN2O14926 492 aa16.39■□□□□ 0.21
SNX13-205ENST00000471744 TRAPPC3O43617 180 aa16.39■□□□□ 0.21
SNX13-205ENST00000471744 EXOC3O60645 756 aa16.39■□□□□ 0.21
SNX13-205ENST00000471744 SOD2P04179 222 aa16.39■□□□□ 0.21
SNX13-205ENST00000471744 PAX3P23760 479 aa16.39■□□□□ 0.21
SNX13-205ENST00000471744 DNAJB1P25685 340 aa16.39■□□□□ 0.21
SNX13-205ENST00000471744 LRPAP1P30533 357 aa16.39■□□□□ 0.21
SNX13-205ENST00000471744 CAMK1Q14012 370 aa16.39■□□□□ 0.21
SNX13-205ENST00000471744 SMC1AQ14683 1233 aaKnown RBP16.39■□□□□ 0.21
SNX13-205ENST00000471744 SNRNP35Q16560 246 aaKnown RBP16.39■□□□□ 0.21
SNX13-205ENST00000471744 UPP1Q16831 310 aa16.39■□□□□ 0.21
SNX13-205ENST00000471744 EDRF1Q3B7T1 1238 aa16.39■□□□□ 0.21
SNX13-205ENST00000471744 SPATA1Q5VX52 437 aa16.39■□□□□ 0.21
SNX13-205ENST00000471744 JADE1Q6IE81 842 aa16.39■□□□□ 0.21
SNX13-205ENST00000471744 FUT10Q6P4F1 479 aa16.39■□□□□ 0.21
SNX13-205ENST00000471744 TMC7Q7Z402 723 aa16.39■□□□□ 0.21
SNX13-205ENST00000471744 GPR65Q8IYL9 337 aa16.39■□□□□ 0.21
SNX13-205ENST00000471744 VPS52Q8N1B4 723 aa16.39■□□□□ 0.21
SNX13-205ENST00000471744 MAFAQ8NHW3 353 aaPredicted RBP16.39■□□□□ 0.21
SNX13-205ENST00000471744 MICAL1Q8TDZ2 1067 aa16.39■□□□□ 0.21
SNX13-205ENST00000471744 CACTINQ8WUQ7 758 aaKnown RBP16.39■□□□□ 0.21
SNX13-205ENST00000471744 HERC2P3Q9BVR0 1158 aa16.39■□□□□ 0.21
SNX13-205ENST00000471744 DMAC2Q9NW81 257 aa16.39■□□□□ 0.21
SNX13-205ENST00000471744 MAPK8IP1Q9UQF2 711 aa16.39■□□□□ 0.21
SNX13-205ENST00000471744 TRANK1O15050 2925 aa16.39■□□□□ 0.21
SNX13-205ENST00000471744 PODXLO00592 558 aa16.38■□□□□ 0.21
SNX13-205ENST00000471744 PSMA7O14818 248 aa16.38■□□□□ 0.21
SNX13-205ENST00000471744 NCK2O43639 380 aa16.38■□□□□ 0.21
SNX13-205ENST00000471744 B3GAT3O94766 335 aa16.38■□□□□ 0.21
SNX13-205ENST00000471744 NR3C1P04150 777 aa16.38■□□□□ 0.21
SNX13-205ENST00000471744 CTSAP10619 480 aa16.38■□□□□ 0.21
SNX13-205ENST00000471744 PRCPP42785 496 aa16.38■□□□□ 0.21
SNX13-205ENST00000471744 CLCNKBP51801 687 aa16.38■□□□□ 0.21
SNX13-205ENST00000471744 SOX4Q06945 474 aaPredicted RBP16.38■□□□□ 0.21
SNX13-205ENST00000471744 MORC3Q14149 939 aa16.38■□□□□ 0.21
SNX13-205ENST00000471744 CAMK4Q16566 473 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms