RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 ZHX1Q9UKY1 873 aaPredicted RBP6.17□□□□□ -1.42
HDAC8-216ENST00000470998 STXBP5LQ9Y2K9 1186 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 Q9Y3F1 56 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 PPME1Q9Y570 386 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 UBIAD1Q9Y5Z9 338 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 TMEM265A0A087WTH1 108 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 A0A1W2PQ45 241 aaPredicted RBP6.16□□□□□ -1.42
HDAC8-216ENST00000470998 A0A1W2PQY0 241 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 CTAGE15A4D2H0 777 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 DCDC2CA8MYV0 355 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 WDR64B1ANS9 1081 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 KIAA0355O15063 1070 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 PMM2O15305 246 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 PJA2O43164 708 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 AKR1B10O60218 316 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 ZEB2O60315 1214 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 CLSTN1O94985 981 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 GCNT3O95395 438 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 PGK1P00558 417 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 NR3C1P04150 777 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 CTAGE8P0CG41 777 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 EPB42P16452 691 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 TAL1P17542 331 aaPredicted RBP6.16□□□□□ -1.42
HDAC8-216ENST00000470998 TCP1P17987 556 aaKnown RBP6.16□□□□□ -1.42
HDAC8-216ENST00000470998 HOXA13P31271 388 aaPredicted RBP6.16□□□□□ -1.42
HDAC8-216ENST00000470998 PSMC2P35998 433 aaKnown RBP6.16□□□□□ -1.42
HDAC8-216ENST00000470998 PRKCIP41743 596 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 ARHGAP25P42331 645 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 QARSP47897 775 aaKnown RBP6.16□□□□□ -1.42
HDAC8-216ENST00000470998 KIF11P52732 1056 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 ACLYP53396 1101 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 SMAD3P84022 425 aaKnown RBP6.16□□□□□ -1.42
HDAC8-216ENST00000470998 TLE2Q04725 743 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 GPS2Q13227 327 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 MTMR1Q13613 665 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 BMS1Q14692 1282 aaKnown RBP6.16□□□□□ -1.42
HDAC8-216ENST00000470998 ELF2Q15723 593 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 ECM1Q16610 540 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 GNPTABQ3T906 1256 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 MAP9Q49MG5 647 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 ARSHQ5FYA8 562 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 CCDC122Q5T0U0 273 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 SFMBT2Q5VUG0 894 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 PAPD7Q5XG87 772 aaKnown RBP6.16□□□□□ -1.42
HDAC8-216ENST00000470998 IQSEC1Q6DN90 963 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 ZNF746Q6NUN9 644 aaPredicted RBP6.16□□□□□ -1.42
HDAC8-216ENST00000470998 RINT1Q6NUQ1 792 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 CCDC174Q6PII3 467 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 WDR59Q6PJI9 974 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 C1orf186Q6ZWK4 172 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 RSRC2Q7L4I2 434 aaKnown RBP6.16□□□□□ -1.42
HDAC8-216ENST00000470998 CTAGE6Q86UF2 777 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 CTAGE4Q8IX94 777 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 C4orf19Q8IY42 314 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 GOLGA6L1Q8N7Z2 621 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 MORC4Q8TE76 937 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 HNRNPLLQ8WVV9 542 aaKnown RBP6.16□□□□□ -1.42
HDAC8-216ENST00000470998 CLEC4DQ8WXI8 215 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 CLP1Q92989 425 aaKnown RBP6.16□□□□□ -1.42
HDAC8-216ENST00000470998 FAM81BQ96LP2 452 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 FGD4Q96M96 766 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 WDR24Q96S15 920 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 SENP7Q9BQF6 1050 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 LXNQ9BS40 222 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 IFIH1Q9BYX4 1025 aaKnown RBP6.16□□□□□ -1.42
HDAC8-216ENST00000470998 ACBD3Q9H3P7 528 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 MMRN2Q9H8L6 949 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 BRD7Q9NPI1 651 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 PRDM5Q9NQX1 630 aaPredicted RBP6.16□□□□□ -1.42
HDAC8-216ENST00000470998 ANKEF1Q9NU02 776 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 NDFIP2Q9NV92 336 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 AIPL1Q9NZN9 384 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 TBC1D7Q9P0N9 293 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 DDX41Q9UJV9 622 aaKnown RBP6.16□□□□□ -1.42
HDAC8-216ENST00000470998 INTUQ9ULD6 942 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 EXOC7Q9UPT5 735 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 JRKLQ9Y4A0 524 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 ZNF536O15090 1300 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 NFASCO94856 1347 aa6.16□□□□□ -1.42
HDAC8-216ENST00000470998 TARSL2A2RTX5 802 aaKnown RBP6.15□□□□□ -1.42
HDAC8-216ENST00000470998 TRIM43BA6NCK2 446 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 TGFBR3LH3BV60 316 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 ARVCFO00192 962 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 CES2O00748 559 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 KIAA0391O15091 583 aaKnown RBP6.15□□□□□ -1.42
HDAC8-216ENST00000470998 TLR3O15455 904 aaKnown RBP6.15□□□□□ -1.42
HDAC8-216ENST00000470998 SLITRK3O94933 977 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 C6orf222P0C671 652 aaPredicted RBP6.15□□□□□ -1.42
HDAC8-216ENST00000470998 ALAS1P13196 640 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 RAG1P15918 1043 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 FERP16591 822 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 CCND2P30279 289 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 CDK7P50613 346 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 PSMC5P62195 406 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 AMPD2Q01433 879 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 CTBSQ01459 385 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 GOLGA8FQ08AF8 430 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 GOLGA8DPQ0D2H9 430 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 MTF1Q14872 753 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 CLUL1Q15846 466 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms