RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 LGALS4P56470 323 aa3.51□□□□□ -1.85
UBXN4-206ENST00000470687 EXOSC10Q01780 885 aaKnown RBP3.51□□□□□ -1.85
UBXN4-206ENST00000470687 ADAM15Q13444 863 aa3.51□□□□□ -1.85
UBXN4-206ENST00000470687 MUM1Q2TAK8 710 aa3.51□□□□□ -1.85
UBXN4-206ENST00000470687 PRAMEF9Q5VWM5 478 aa3.51□□□□□ -1.85
UBXN4-206ENST00000470687 MBNL2Q5VZF2 373 aaKnown RBP3.51□□□□□ -1.85
UBXN4-206ENST00000470687 CLEC14AQ86T13 490 aa3.51□□□□□ -1.85
UBXN4-206ENST00000470687 LRRC59Q96AG4 307 aaKnown RBP3.51□□□□□ -1.85
UBXN4-206ENST00000470687 QRSL1Q9H0R6 528 aaKnown RBP3.51□□□□□ -1.85
UBXN4-206ENST00000470687 OR10A2Q9H208 303 aa3.51□□□□□ -1.85
UBXN4-206ENST00000470687 PCIF1Q9H4Z3 704 aa3.51□□□□□ -1.85
UBXN4-206ENST00000470687 NRDE2Q9H7Z3 1164 aa3.51□□□□□ -1.85
UBXN4-206ENST00000470687 HOMER2Q9NSB8 354 aa3.51□□□□□ -1.85
UBXN4-206ENST00000470687 TYW1Q9NV66 732 aaKnown RBP3.51□□□□□ -1.85
UBXN4-206ENST00000470687 ARHGAP28Q9P2N2 729 aa3.51□□□□□ -1.85
UBXN4-206ENST00000470687 DNAI1Q9UI46 699 aa3.51□□□□□ -1.85
UBXN4-206ENST00000470687 FBXO10Q9UK96 956 aa3.51□□□□□ -1.85
UBXN4-206ENST00000470687 LIMCH1Q9UPQ0 1083 aa3.51□□□□□ -1.85
UBXN4-206ENST00000470687 TET3O43151 1660 aa3.51□□□□□ -1.85
UBXN4-206ENST00000470687 TMEM94Q12767 1356 aa3.51□□□□□ -1.85
UBXN4-206ENST00000470687 JCADQ9P266 1359 aa3.51□□□□□ -1.85
UBXN4-206ENST00000470687 A0A0G2JNJ9 132 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 SHTN1A0MZ66 631 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 PMS2P1A4D2B8 440 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 GOLGA8AA7E2F4 631 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 GOLGA8BA8MQT2 603 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 SLC26A4O43511 780 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 ULK1O75385 1050 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 STC2O76061 302 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 RHOBTB3O94955 611 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 PARNO95453 639 aaKnown RBP3.5□□□□□ -1.85
UBXN4-206ENST00000470687 APEX1P27695 318 aaKnown RBP3.5□□□□□ -1.85
UBXN4-206ENST00000470687 MRE11P49959 708 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 ADCY7P51828 1080 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 ANAPC15P60006 121 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 IGBP1P78318 339 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 CCT2P78371 535 aaKnown RBP3.5□□□□□ -1.85
UBXN4-206ENST00000470687 ITKQ08881 620 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 NFE2Q16621 373 aaPredicted RBP3.5□□□□□ -1.85
UBXN4-206ENST00000470687 COLEC12Q5KU26 742 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 IQSEC1Q6DN90 963 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 GRAMD4Q6IC98 578 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 CXXC5Q7LFL8 322 aaKnown RBP3.5□□□□□ -1.85
UBXN4-206ENST00000470687 BHLHA9Q7RTU4 235 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 MRGPREQ86SM8 312 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 CMTR2Q8IYT2 770 aaKnown RBP3.5□□□□□ -1.85
UBXN4-206ENST00000470687 SHCBP1Q8NEM2 672 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 OR14K1Q8NGZ2 314 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 HOOK2Q96ED9 719 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 TEKT5Q96M29 485 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 BBC3Q96PG8 261 aaPredicted RBP3.5□□□□□ -1.85
UBXN4-206ENST00000470687 MPHOSPH9Q99550 1183 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 ANLNQ9NQW6 1124 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 ADARB2Q9NS39 739 aaKnown RBP3.5□□□□□ -1.85
UBXN4-206ENST00000470687 USP36Q9P275 1121 aaKnown RBP3.5□□□□□ -1.85
UBXN4-206ENST00000470687 Q9UFV3 132 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 DPP7Q9UHL4 492 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 IPPQ9Y573 584 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 CDY2AQ9Y6F7 541 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 DCCP43146 1447 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 NUP155O75694 1391 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 ATRNL1Q5VV63 1379 aa3.5□□□□□ -1.85
UBXN4-206ENST00000470687 MROH1Q8NDA8 1641 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 hCG_2014768A0A024R1R8 64 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 A6NNZ2 444 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 INO80B-WBP1J3KQ70 363 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 ADCY6O43306 1168 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 ERBB2P04626 1255 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 ITGB6P18564 788 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 PTGS2P35354 604 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 SCNN1GP51170 649 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 DSC2Q02487 901 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 ROM1Q03395 351 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 ADCY1Q08828 1119 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 TOB2Q14106 344 aaPredicted RBP3.49□□□□□ -1.85
UBXN4-206ENST00000470687 ADRM1Q16186 407 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 CT47A1Q5JQC4 288 aaPredicted RBP3.49□□□□□ -1.85
UBXN4-206ENST00000470687 SYCE2Q6PIF2 218 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 B3GNT9Q6UX72 402 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 Q6ZRM9 215 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 ESPNLQ6ZVH7 1005 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 BMP8AQ7Z5Y6 402 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 ANKRD35Q8N283 1001 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 MTMR8Q96EF0 704 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 SMAD5Q99717 465 aaKnown RBP3.49□□□□□ -1.85
UBXN4-206ENST00000470687 SLC13A1Q9BZW2 595 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 INO80BQ9C086 356 aaPredicted RBP3.49□□□□□ -1.85
UBXN4-206ENST00000470687 KCNH6Q9H252 994 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 RIOX1Q9H6W3 641 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 ING3Q9NXR8 418 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 KCMF1Q9P0J7 381 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 ZNHIT2Q9UHR6 403 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 MCM8Q9UJA3 840 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 SH3BP1Q9Y3L3 701 aa3.49□□□□□ -1.85
UBXN4-206ENST00000470687 NOC2LQ9Y3T9 749 aaKnown RBP3.49□□□□□ -1.85
UBXN4-206ENST00000470687 LRPPRCP42704 1394 aaKnown RBP3.49□□□□□ -1.85
UBXN4-206ENST00000470687 CEP152O94986 1710 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 DIP2AQ14689 1571 aa3.48□□□□□ -1.85
UBXN4-206ENST00000470687 MED1Q15648 1581 aaPredicted RBP3.48□□□□□ -1.85
UBXN4-206ENST00000470687 ZFYVE9O95405 1425 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms