RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 ADAM12O43184 909 aa19.18■□□□□ 0.66
COL7A1-208ENST00000470076 XYLBO75191 536 aa19.18■□□□□ 0.66
COL7A1-208ENST00000470076 POU2F2P09086 479 aa19.18■□□□□ 0.66
COL7A1-208ENST00000470076 CDC25AP30304 524 aa19.18■□□□□ 0.66
COL7A1-208ENST00000470076 OR1D2P34982 312 aa19.18■□□□□ 0.66
COL7A1-208ENST00000470076 MAPK7Q13164 816 aa19.18■□□□□ 0.66
COL7A1-208ENST00000470076 HTR4Q13639 388 aa19.18■□□□□ 0.66
COL7A1-208ENST00000470076 UVSSAQ2YD98 709 aa19.18■□□□□ 0.66
COL7A1-208ENST00000470076 MCTP1Q6DN14 999 aa19.18■□□□□ 0.66
COL7A1-208ENST00000470076 ALKAL1Q6UXT8 129 aa19.18■□□□□ 0.66
COL7A1-208ENST00000470076 C1orf186Q6ZWK4 172 aa19.18■□□□□ 0.66
COL7A1-208ENST00000470076 RTL10Q7L3V2 364 aa19.18■□□□□ 0.66
COL7A1-208ENST00000470076 CEP120Q8N960 986 aa19.18■□□□□ 0.66
COL7A1-208ENST00000470076 DDX27Q96GQ7 796 aaKnown RBP19.18■□□□□ 0.66
COL7A1-208ENST00000470076 MMTAG2Q9BU76 263 aaKnown RBP19.18■□□□□ 0.66
COL7A1-208ENST00000470076 TARS2Q9BW92 718 aaKnown RBP19.18■□□□□ 0.66
COL7A1-208ENST00000470076 KCNG1Q9UIX4 513 aa19.18■□□□□ 0.66
COL7A1-208ENST00000470076 BACE2Q9Y5Z0 518 aa19.18■□□□□ 0.66
COL7A1-208ENST00000470076 MYH11P35749 1972 aa19.18■□□□□ 0.66
COL7A1-208ENST00000470076 PI15O43692 258 aa19.17■□□□□ 0.66
COL7A1-208ENST00000470076 MCF2P10911 925 aa19.17■□□□□ 0.66
COL7A1-208ENST00000470076 GUCY2CP25092 1073 aa19.17■□□□□ 0.66
COL7A1-208ENST00000470076 NBL1P41271 181 aa19.17■□□□□ 0.66
COL7A1-208ENST00000470076 ATP2C1P98194 919 aaPredicted RBP19.17■□□□□ 0.66
COL7A1-208ENST00000470076 AXDND1Q5T1B0 1012 aaPredicted RBP19.17■□□□□ 0.66
COL7A1-208ENST00000470076 ANKS3Q6ZW76 656 aa19.17■□□□□ 0.66
COL7A1-208ENST00000470076 TAS1R3Q7RTX0 852 aa19.17■□□□□ 0.66
COL7A1-208ENST00000470076 KCNK18Q7Z418 384 aa19.17■□□□□ 0.66
COL7A1-208ENST00000470076 CCDC105Q8IYK2 499 aa19.17■□□□□ 0.66
COL7A1-208ENST00000470076 SLC7A14Q8TBB6 771 aa19.17■□□□□ 0.66
COL7A1-208ENST00000470076 NTPCRQ9BSD7 190 aaKnown RBP19.17■□□□□ 0.66
COL7A1-208ENST00000470076 TCHPQ9BT92 498 aa19.17■□□□□ 0.66
COL7A1-208ENST00000470076 GOLGA2P5Q9HBQ8 144 aa19.17■□□□□ 0.66
COL7A1-208ENST00000470076 CDH7Q9ULB5 785 aa19.17■□□□□ 0.66
COL7A1-208ENST00000470076 KRBA1A5PL33 1030 aa19.16■□□□□ 0.66
COL7A1-208ENST00000470076 STK25O00506 426 aa19.16■□□□□ 0.66
COL7A1-208ENST00000470076 CCL16O15467 120 aa19.16■□□□□ 0.66
COL7A1-208ENST00000470076 PROZP22891 400 aa19.16■□□□□ 0.66
COL7A1-208ENST00000470076 IGFBP6P24592 240 aaPredicted RBP19.16■□□□□ 0.66
COL7A1-208ENST00000470076 TKTP29401 623 aaKnown RBP19.16■□□□□ 0.66
COL7A1-208ENST00000470076 OSTNP61366 133 aa19.16■□□□□ 0.66
COL7A1-208ENST00000470076 HYIQ5T013 277 aa19.16■□□□□ 0.66
COL7A1-208ENST00000470076 MPZL3Q6UWV2 235 aa19.16■□□□□ 0.66
COL7A1-208ENST00000470076 CD300LGQ6UXG3 332 aa19.16■□□□□ 0.66
COL7A1-208ENST00000470076 C3orf58Q8NDZ4 430 aa19.16■□□□□ 0.66
COL7A1-208ENST00000470076 SPIRE2Q8WWL2 714 aa19.16■□□□□ 0.66
COL7A1-208ENST00000470076 SNX27Q96L92 541 aa19.16■□□□□ 0.66
COL7A1-208ENST00000470076 ACAP3Q96P50 834 aa19.16■□□□□ 0.66
COL7A1-208ENST00000470076 SLC2A4RGQ9NR83 387 aa19.16■□□□□ 0.66
COL7A1-208ENST00000470076 POLIQ9UNA4 740 aa19.16■□□□□ 0.66
COL7A1-208ENST00000470076 CDY1Q9Y6F8 540 aa19.16■□□□□ 0.66
COL7A1-208ENST00000470076 NUMBLQ9Y6R0 609 aa19.16■□□□□ 0.66
COL7A1-208ENST00000470076 FAM186AA6NE01 2351 aa19.15■□□□□ 0.66
COL7A1-208ENST00000470076 ABLIM1O14639 778 aa19.15■□□□□ 0.66
COL7A1-208ENST00000470076 SLC16A4O15374 487 aa19.15■□□□□ 0.66
COL7A1-208ENST00000470076 CENPBP07199 599 aaPredicted RBP19.15■□□□□ 0.66
COL7A1-208ENST00000470076 KCNE1P15382 129 aa19.15■□□□□ 0.66
COL7A1-208ENST00000470076 RFX1P22670 979 aa19.15■□□□□ 0.66
COL7A1-208ENST00000470076 SMTNP53814 917 aa19.15■□□□□ 0.66
COL7A1-208ENST00000470076 NTHL1P78549 312 aa19.15■□□□□ 0.66
COL7A1-208ENST00000470076 SOX4Q06945 474 aaPredicted RBP19.15■□□□□ 0.66
COL7A1-208ENST00000470076 STRN3Q13033 797 aa19.15■□□□□ 0.66
COL7A1-208ENST00000470076 ZRSR1Q15695 479 aaKnown RBP19.15■□□□□ 0.66
COL7A1-208ENST00000470076 SYT2Q8N9I0 419 aaPredicted RBP19.15■□□□□ 0.66
COL7A1-208ENST00000470076 DTWD2Q8NBA8 298 aa19.15■□□□□ 0.66
COL7A1-208ENST00000470076 GPR152Q8TDT2 470 aa19.15■□□□□ 0.66
COL7A1-208ENST00000470076 KCND2Q9NZV8 630 aa19.15■□□□□ 0.66
COL7A1-208ENST00000470076 CA14Q9ULX7 337 aa19.15■□□□□ 0.66
COL7A1-208ENST00000470076 WDR87Q6ZQQ6 2873 aa19.14■□□□□ 0.65
COL7A1-208ENST00000470076 SFI1A8K8P3 1242 aa19.14■□□□□ 0.65
COL7A1-208ENST00000470076 H3BQV1 296 aa19.14■□□□□ 0.65
COL7A1-208ENST00000470076 I3L4J1 428 aa19.14■□□□□ 0.65
COL7A1-208ENST00000470076 PODXLO00592 558 aa19.14■□□□□ 0.65
COL7A1-208ENST00000470076 PLS3P13797 630 aa19.14■□□□□ 0.65
COL7A1-208ENST00000470076 BRCC3P46736 316 aa19.14■□□□□ 0.65
COL7A1-208ENST00000470076 ARL6IP4Q66PJ3 421 aaKnown RBP19.14■□□□□ 0.65
COL7A1-208ENST00000470076 PHLDB3Q6NSJ2 640 aa19.14■□□□□ 0.65
COL7A1-208ENST00000470076 RSPO2Q6UXX9 243 aaPredicted RBP19.14■□□□□ 0.65
COL7A1-208ENST00000470076 MTSS1LQ765P7 747 aa19.14■□□□□ 0.65
COL7A1-208ENST00000470076 FGF13Q92913 245 aa19.14■□□□□ 0.65
COL7A1-208ENST00000470076 CDK5RAP3Q96JB5 506 aa19.14■□□□□ 0.65
COL7A1-208ENST00000470076 TMX3Q96JJ7 454 aa19.14■□□□□ 0.65
COL7A1-208ENST00000470076 ZMAT2Q96NC0 199 aaKnown RBP19.14■□□□□ 0.65
COL7A1-208ENST00000470076 TBC1D17Q9HA65 648 aa19.14■□□□□ 0.65
COL7A1-208ENST00000470076 ARHGEF3Q9NR81 526 aa19.14■□□□□ 0.65
COL7A1-208ENST00000470076 CNTN3Q9P232 1028 aa19.14■□□□□ 0.65
COL7A1-208ENST00000470076 DMDP11532 3685 aa19.14■□□□□ 0.65
COL7A1-208ENST00000470076 MYH15Q9Y2K3 1946 aa19.13■□□□□ 0.65
COL7A1-208ENST00000470076 VWA3AA6NCI4 1184 aa19.13■□□□□ 0.65
COL7A1-208ENST00000470076 SYN3O14994 580 aa19.13■□□□□ 0.65
COL7A1-208ENST00000470076 TOM1L1O75674 476 aa19.13■□□□□ 0.65
COL7A1-208ENST00000470076 RPL9P32969 192 aaKnown RBP19.13■□□□□ 0.65
COL7A1-208ENST00000470076 ANGPT1Q15389 498 aa19.13■□□□□ 0.65
COL7A1-208ENST00000470076 SLC8B1Q6J4K2 584 aa19.13■□□□□ 0.65
COL7A1-208ENST00000470076 TMEM161BQ8NDZ6 487 aa19.13■□□□□ 0.65
COL7A1-208ENST00000470076 ZNF461Q8TAF7 563 aa19.13■□□□□ 0.65
COL7A1-208ENST00000470076 FGF14Q92915 247 aa19.13■□□□□ 0.65
COL7A1-208ENST00000470076 PNMA5Q96PV4 448 aa19.13■□□□□ 0.65
COL7A1-208ENST00000470076 KCNH3Q9ULD8 1083 aa19.13■□□□□ 0.65
COL7A1-208ENST00000470076 NOTCH4Q99466 2003 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms