RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 ZNF410Q86VK4 478 aa11.85□□□□□ -0.51
TRAIP-202ENST00000469027 SCUBE3Q8IX30 993 aa11.85□□□□□ -0.51
TRAIP-202ENST00000469027 LNX1Q8TBB1 728 aaPredicted RBP11.85□□□□□ -0.51
TRAIP-202ENST00000469027 ZSCAN18Q8TBC5 510 aaPredicted RBP11.85□□□□□ -0.51
TRAIP-202ENST00000469027 ADAMTS14Q8WXS8 1223 aa11.85□□□□□ -0.51
TRAIP-202ENST00000469027 ZSWIM3Q96MP5 696 aa11.85□□□□□ -0.51
TRAIP-202ENST00000469027 AVENQ9NQS1 362 aaPredicted RBP11.85□□□□□ -0.51
TRAIP-202ENST00000469027 GTSE1Q9NYZ3 720 aa11.85□□□□□ -0.51
TRAIP-202ENST00000469027 EVLQ9UI08 416 aaPredicted RBP11.85□□□□□ -0.51
TRAIP-202ENST00000469027 TEX15Q9BXT5 2789 aa11.85□□□□□ -0.51
TRAIP-202ENST00000469027 SPTAN1Q13813 2472 aaKnown RBP11.84□□□□□ -0.51
TRAIP-202ENST00000469027 UPK3BL1B0FP48 263 aa11.84□□□□□ -0.51
TRAIP-202ENST00000469027 UPK3BL2E5RIL1 263 aa11.84□□□□□ -0.51
TRAIP-202ENST00000469027 CHADO15335 359 aa11.84□□□□□ -0.51
TRAIP-202ENST00000469027 CFIP05156 583 aa11.84□□□□□ -0.51
TRAIP-202ENST00000469027 PRKCEQ02156 737 aa11.84□□□□□ -0.51
TRAIP-202ENST00000469027 HNRNPDQ14103 355 aaKnown RBP11.84□□□□□ -0.51
TRAIP-202ENST00000469027 TRIP6Q15654 476 aaKnown RBP11.84□□□□□ -0.51
TRAIP-202ENST00000469027 PRSS36Q5K4E3 855 aa11.84□□□□□ -0.51
TRAIP-202ENST00000469027 CYP4A22Q5TCH4 519 aa11.84□□□□□ -0.51
TRAIP-202ENST00000469027 HAUS6Q7Z4H7 955 aa11.84□□□□□ -0.51
TRAIP-202ENST00000469027 C11orf74Q86VG3 221 aa11.84□□□□□ -0.51
TRAIP-202ENST00000469027 CNNM3Q8NE01 707 aa11.84□□□□□ -0.51
TRAIP-202ENST00000469027 DIAPH3Q9NSV4 1193 aa11.84□□□□□ -0.51
TRAIP-202ENST00000469027 MIOSQ9NXC5 875 aa11.84□□□□□ -0.51
TRAIP-202ENST00000469027 CACNG4Q9UBN1 327 aa11.84□□□□□ -0.51
TRAIP-202ENST00000469027 PCDHA10Q9Y5I2 948 aa11.84□□□□□ -0.51
TRAIP-202ENST00000469027 GON4LQ3T8J9 2241 aa11.84□□□□□ -0.51
TRAIP-202ENST00000469027 NCANO14594 1321 aa11.84□□□□□ -0.51
TRAIP-202ENST00000469027 ERICH2A1L162 156 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 IPO5O00410 1097 aaKnown RBP11.83□□□□□ -0.52
TRAIP-202ENST00000469027 PRRG1O14668 218 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 OPHN1O60890 802 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 APBB3O95704 486 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 ELF1P32519 619 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 CCR2P41597 374 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 RAB33AQ14088 237 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 HSP90AA2PQ14568 343 aaPredicted RBP11.83□□□□□ -0.52
TRAIP-202ENST00000469027 MAPK6Q16659 721 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 USP39Q53GS9 565 aaKnown RBP11.83□□□□□ -0.52
TRAIP-202ENST00000469027 UBXN11Q5T124 520 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 PDXDC1Q6P996 788 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 RTL10Q7L3V2 364 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 ARMCX6Q7L4S7 300 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 PLA2G4DQ86XP0 818 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 KSR1Q8IVT5 923 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 SMAP1Q8IYB5 467 aaPredicted RBP11.83□□□□□ -0.52
TRAIP-202ENST00000469027 FAM181AQ8N9Y4 354 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 SPRYD3Q8NCJ5 442 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 SMG8Q8ND04 991 aaKnown RBP11.83□□□□□ -0.52
TRAIP-202ENST00000469027 E2F7Q96AV8 911 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 ZFYVE19Q96K21 471 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 FCRL3Q96P31 734 aaPredicted RBP11.83□□□□□ -0.52
TRAIP-202ENST00000469027 TMEM209Q96SK2 561 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 TPSD1Q9BZJ3 242 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 RNF39Q9H2S5 420 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 OSBPL3Q9H4L5 887 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 SNTG2Q9NY99 539 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 SUCLA2Q9P2R7 463 aaPredicted RBP11.83□□□□□ -0.52
TRAIP-202ENST00000469027 MBD1Q9UIS9 605 aaPredicted RBP11.83□□□□□ -0.52
TRAIP-202ENST00000469027 HES2Q9Y543 173 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 IPPQ9Y573 584 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 TAF6LQ9Y6J9 622 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 VWA8A3KMH1 1905 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 GOLGA4Q13439 2230 aaKnown RBP11.83□□□□□ -0.52
TRAIP-202ENST00000469027 PI4KAP42356 2102 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 COL6A6A6NMZ7 2263 aa11.83□□□□□ -0.52
TRAIP-202ENST00000469027 MEIS1O00470 390 aa11.82□□□□□ -0.52
TRAIP-202ENST00000469027 IFIT3O14879 490 aaKnown RBP11.82□□□□□ -0.52
TRAIP-202ENST00000469027 RNF40O75150 1001 aa11.82□□□□□ -0.52
TRAIP-202ENST00000469027 MYL4P12829 197 aa11.82□□□□□ -0.52
TRAIP-202ENST00000469027 GJA1P17302 382 aa11.82□□□□□ -0.52
TRAIP-202ENST00000469027 GRSF1Q12849 480 aaKnown RBP eCLIP11.82□□□□□ -0.52
TRAIP-202ENST00000469027 MTERF2Q49AM1 385 aa11.82□□□□□ -0.52
TRAIP-202ENST00000469027 ZNF746Q6NUN9 644 aaPredicted RBP11.82□□□□□ -0.52
TRAIP-202ENST00000469027 GPIHBP1Q8IV16 184 aa11.82□□□□□ -0.52
TRAIP-202ENST00000469027 ELMOD1Q8N336 334 aa11.82□□□□□ -0.52
TRAIP-202ENST00000469027 ZNF577Q9BSK1 485 aa11.82□□□□□ -0.52
TRAIP-202ENST00000469027 SPZ1Q9BXG8 430 aa11.82□□□□□ -0.52
TRAIP-202ENST00000469027 FSCN3Q9NQT6 498 aa11.82□□□□□ -0.52
TRAIP-202ENST00000469027 DKK4Q9UBT3 224 aa11.82□□□□□ -0.52
TRAIP-202ENST00000469027 CIZ1Q9ULV3 898 aaPredicted RBP11.82□□□□□ -0.52
TRAIP-202ENST00000469027 APOBEC2Q9Y235 224 aaKnown RBP11.82□□□□□ -0.52
TRAIP-202ENST00000469027 CDY1Q9Y6F8 540 aa11.82□□□□□ -0.52
TRAIP-202ENST00000469027 DPYSL4O14531 572 aa11.81□□□□□ -0.52
TRAIP-202ENST00000469027 DHX15O43143 795 aaKnown RBP11.81□□□□□ -0.52
TRAIP-202ENST00000469027 MICAL2O94851 1124 aa11.81□□□□□ -0.52
TRAIP-202ENST00000469027 WISP1O95388 367 aa11.81□□□□□ -0.52
TRAIP-202ENST00000469027 BCKDHBP21953 392 aa11.81□□□□□ -0.52
TRAIP-202ENST00000469027 ITPKBP27987 946 aa11.81□□□□□ -0.52
TRAIP-202ENST00000469027 TAF1BQ53T94 588 aaPredicted RBP11.81□□□□□ -0.52
TRAIP-202ENST00000469027 IQCEQ6IPM2 695 aa11.81□□□□□ -0.52
TRAIP-202ENST00000469027 CATIPQ7Z7H3 387 aa11.81□□□□□ -0.52
TRAIP-202ENST00000469027 SMC5Q8IY18 1101 aa11.81□□□□□ -0.52
TRAIP-202ENST00000469027 CTCFLQ8NI51 663 aaPredicted RBP11.81□□□□□ -0.52
TRAIP-202ENST00000469027 CAMK1GQ96NX5 476 aa11.81□□□□□ -0.52
TRAIP-202ENST00000469027 EIF2AQ9BY44 585 aaKnown RBP11.81□□□□□ -0.52
TRAIP-202ENST00000469027 ANO3Q9BYT9 981 aa11.81□□□□□ -0.52
TRAIP-202ENST00000469027 TRIM6Q9C030 488 aaPredicted RBP11.81□□□□□ -0.52
TRAIP-202ENST00000469027 TRPV4Q9HBA0 871 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms