RNA–Protein interactions for RNA: ENST00000468469.5

COMMD3-207, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 526 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-207ENST00000468469 TET1Q8NFU7 2136 aa3.95□□□□□ -1.78
COMMD3-207ENST00000468469 KAT6AQ92794 2004 aa3.95□□□□□ -1.78
COMMD3-207ENST00000468469 SF3B1O75533 1304 aaKnown RBP eCLIP3.95□□□□□ -1.783e-6■■■■■ 44.6
COMMD3-207ENST00000468469 NLRC5Q86WI3 1866 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 PDE4DIPQ5VU43 2346 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 SMIM28A0A1B0GU29 152 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.94□□□□□ -1.78
COMMD3-207ENST00000468469 GOLGA8IPA6NC78 632 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 GOLGA8JA6NMD2 632 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 NT5C1B-RDH14C9J2C7 533 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 F8W810 466 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 TMEM189-UBE2V1I3L0A0 370 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 PODXLO00592 558 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 NRP1O14786 923 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 FSCN2O14926 492 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 KIAA0391O15091 583 aaKnown RBP3.94□□□□□ -1.78
COMMD3-207ENST00000468469 MEFVO15553 781 aaPredicted RBP3.94□□□□□ -1.78
COMMD3-207ENST00000468469 TGFB1I1O43294 461 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 XPOTO43592 962 aaKnown RBP3.94□□□□□ -1.78
COMMD3-207ENST00000468469 CALUO43852 315 aaPredicted RBP3.94□□□□□ -1.78
COMMD3-207ENST00000468469 EXTL3O43909 919 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 FAM189A1O60320 539 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 IL18RAPO95256 599 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 SMC2O95347 1197 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 LDHAP00338 332 aaKnown RBP3.94□□□□□ -1.78
COMMD3-207ENST00000468469 URODP06132 367 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 GALTP07902 379 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 NFICP08651 508 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 KCNE1P15382 129 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 GARTP22102 1010 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 DNAJB1P25685 340 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 ADSSP30520 456 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 MCM4P33991 863 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 IRS1P35568 1242 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 CYP2J2P51589 502 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 PLCB3Q01970 1234 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 SOX4Q06945 474 aaPredicted RBP3.94□□□□□ -1.78
COMMD3-207ENST00000468469 SPAG1Q07617 926 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 STK4Q13043 487 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 PSMD2Q13200 908 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 HSP90AA2PQ14568 343 aaPredicted RBP3.94□□□□□ -1.78
COMMD3-207ENST00000468469 SMC1AQ14683 1233 aaKnown RBP3.94□□□□□ -1.78
COMMD3-207ENST00000468469 BMS1Q14692 1282 aaKnown RBP3.94□□□□□ -1.78
COMMD3-207ENST00000468469 KCNB1Q14721 858 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 SKIV2LQ15477 1246 aaKnown RBP3.94□□□□□ -1.78
COMMD3-207ENST00000468469 CCDC85BQ15834 202 aaPredicted RBP3.94□□□□□ -1.78
COMMD3-207ENST00000468469 ENOX2Q16206 610 aaKnown RBP3.94□□□□□ -1.78
COMMD3-207ENST00000468469 KNOP1Q1ED39 458 aaKnown RBP3.94□□□□□ -1.78
COMMD3-207ENST00000468469 SLC10A6Q3KNW5 377 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 XKR4Q5GH76 650 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 TCEAL5Q5H9L2 206 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 JADE1Q6IE81 842 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 FUT10Q6P4F1 479 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 THSD4Q6ZMP0 1018 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 HS2ST1Q7LGA3 356 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 DDX53Q86TM3 631 aaKnown RBP3.94□□□□□ -1.78
COMMD3-207ENST00000468469 BRSK2Q8IWQ3 736 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 CD302Q8IX05 232 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 ELOA2Q8IYF1 753 aaPredicted RBP3.94□□□□□ -1.78
COMMD3-207ENST00000468469 SMYD4Q8IYR2 804 aaPredicted RBP3.94□□□□□ -1.78
COMMD3-207ENST00000468469 VPS52Q8N1B4 723 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 GPD1LQ8N335 351 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 GOLGA5Q8TBA6 731 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 ZNF507Q8TCN5 953 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 SPPL3Q8TCT6 385 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 MICAL1Q8TDZ2 1067 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 PPM1EQ8WY54 764 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 ERCC4Q92889 916 aaPredicted RBP3.94□□□□□ -1.78
COMMD3-207ENST00000468469 PPP2R3CQ969Q6 453 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 UROC1Q96N76 676 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 ZMAT2Q96NC0 199 aaKnown RBP3.94□□□□□ -1.78
COMMD3-207ENST00000468469 GSDMAQ96QA5 445 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 PPP1R10Q96QC0 940 aaKnown RBP3.94□□□□□ -1.78
COMMD3-207ENST00000468469 HERC2P3Q9BVR0 1158 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 COLEC11Q9BWP8 271 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 ZBP1Q9H171 429 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 NUP62CLQ9H1M0 184 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 CXCL16Q9H2A7 254 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 PCIF1Q9H4Z3 704 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 PLEKHA5Q9HAU0 1116 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 GOLGA2P5Q9HBQ8 144 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 HSPBP1Q9NZL4 362 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 LMCD1Q9NZU5 365 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 CGNQ9P2M7 1197 aaKnown RBP3.94□□□□□ -1.78
COMMD3-207ENST00000468469 CACNG4Q9UBN1 327 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 STK39Q9UEW8 545 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 TUBGCP4Q9UGJ1 667 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 PUF60Q9UHX1 559 aaKnown RBP3.94□□□□□ -1.78
COMMD3-207ENST00000468469 ADAM28Q9UKQ2 775 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 UBQLN1Q9UMX0 589 aaKnown RBP3.94□□□□□ -1.78
COMMD3-207ENST00000468469 FAN1Q9Y2M0 1017 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 DERAQ9Y315 318 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 PCDHGC5Q9Y5F6 944 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.94□□□□□ -1.78
COMMD3-207ENST00000468469 MTCH2Q9Y6C9 303 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 FNDC1Q4ZHG4 1894 aaPredicted RBP3.94□□□□□ -1.78
COMMD3-207ENST00000468469 CEP290O15078 2479 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 EVPLQ92817 2033 aa3.94□□□□□ -1.78
COMMD3-207ENST00000468469 TTC26A0AVF1 554 aa3.93□□□□□ -1.78
COMMD3-207ENST00000468469 FSD2A1L4K1 749 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms