RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 DSC3Q14574 896 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 CLUL1Q15846 466 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 ZNF569Q5MCW4 686 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 FAM26FQ5R3K3 315 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 ATF7IP2Q5U623 682 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 ISM2Q6H9L7 571 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 FAM117BQ6P1L5 589 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 GLB1LQ6UWU2 654 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 ZPBP2Q6X784 338 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.84□□□□□ -0.67
PMF1-204ENST00000466489 SYCP3Q8IZU3 236 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 ADSSL1Q8N142 457 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 RNF10Q8N5U6 811 aaKnown RBP10.84□□□□□ -0.67
PMF1-204ENST00000466489 TMEM161BQ8NDZ6 487 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 FAM71BQ8TC56 605 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 NELFBQ8WX92 580 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 SYN2Q92777 582 aaPredicted RBP10.84□□□□□ -0.67
PMF1-204ENST00000466489 DNAJC19Q96DA6 116 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 CPB2Q96IY4 423 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 CALR3Q96L12 384 aaKnown RBP10.84□□□□□ -0.67
PMF1-204ENST00000466489 ALS2CR12Q96Q35 445 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 RAD9AQ99638 391 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 OSBPL7Q9BZF2 842 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 UBXN6Q9BZV1 441 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 CCDC113Q9H0I3 377 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 ST6GALNAC4Q9H4F1 302 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 TMEM206Q9H813 350 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 PCDHB2Q9Y5E7 798 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 SAR1BQ9Y6B6 198 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 UBE4BO95155 1302 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 ADGRA3Q8IWK6 1321 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 FNDC1Q4ZHG4 1894 aaPredicted RBP10.83□□□□□ -0.68
PMF1-204ENST00000466489 EIF3CLB5ME19 914 aaKnown RBP10.83□□□□□ -0.68
PMF1-204ENST00000466489 MAP2K7O14733 419 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 MGEA5O60502 916 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 ZNF623O75123 536 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 TOM1L1O75674 476 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 NDUFA10O95299 355 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 ADKP55263 362 aaKnown RBP10.83□□□□□ -0.68
PMF1-204ENST00000466489 APBA1Q02410 837 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 IFI16Q16666 785 aaKnown RBP10.83□□□□□ -0.68
PMF1-204ENST00000466489 KYAT1Q16773 422 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 LONRF2Q1L5Z9 754 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 ZNF568Q3ZCX4 644 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 VWA3BQ502W6 1294 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 HABP4Q5JVS0 413 aaKnown RBP10.83□□□□□ -0.68
PMF1-204ENST00000466489 C10orf76Q5T2E6 689 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 SLFN12LQ6IEE8 588 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 GBP6Q6ZN66 633 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 ZNF720Q7Z2F6 126 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 ECHDC2Q86YB7 292 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 URGCPQ8TCY9 931 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 LINC01599Q8WXQ3 324 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 KCNN1Q92952 543 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 ACCSQ96QU6 501 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 EIF3CQ99613 913 aaKnown RBP10.83□□□□□ -0.68
PMF1-204ENST00000466489 TSG101Q99816 390 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 MRPL9Q9BYD2 267 aaKnown RBP10.83□□□□□ -0.68
PMF1-204ENST00000466489 BLZF1Q9H2G9 400 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 SLC28A3Q9HAS3 691 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 SAMSN1Q9NSI8 373 aaKnown RBP10.83□□□□□ -0.68
PMF1-204ENST00000466489 TBC1D7Q9P0N9 293 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 ANKFY1Q9P2R3 1169 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 TBX20Q9UMR3 447 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 TNFSF13BQ9Y275 285 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 RWDD3Q9Y3V2 267 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 JRKLQ9Y4A0 524 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 DAAM1Q9Y4D1 1078 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 TDRD15B5MCY1 1934 aaKnown RBP10.83□□□□□ -0.68
PMF1-204ENST00000466489 RALGAPA2Q2PPJ7 1873 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 NLRC5Q86WI3 1866 aa10.83□□□□□ -0.68
PMF1-204ENST00000466489 MYO9BQ13459 2157 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 ZMYM2Q9UBW7 1377 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 TMEM265A0A087WTH1 108 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 EIF3DO15371 548 aaKnown RBP eCLIP10.82□□□□□ -0.68
PMF1-204ENST00000466489 CLDN3O15551 220 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 B4GALT5O43286 388 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 TACC1O75410 805 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 NPTXRO95502 500 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 ITGA4P13612 1032 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 TCP1P17987 556 aaKnown RBP10.82□□□□□ -0.68
PMF1-204ENST00000466489 TRIM21P19474 475 aaKnown RBP10.82□□□□□ -0.68
PMF1-204ENST00000466489 DNAJB2P25686 324 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 NMT1P30419 496 aaKnown RBP10.82□□□□□ -0.68
PMF1-204ENST00000466489 HOXA11P31270 313 aaPredicted RBP10.82□□□□□ -0.68
PMF1-204ENST00000466489 HNRNPH3P31942 346 aaKnown RBP10.82□□□□□ -0.68
PMF1-204ENST00000466489 CASP14P31944 242 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 YARSP54577 528 aaKnown RBP10.82□□□□□ -0.68
PMF1-204ENST00000466489 FAM189BP81408 668 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 GTF2BQ00403 316 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 BTG3Q14201 252 aaPredicted RBP10.82□□□□□ -0.68
PMF1-204ENST00000466489 KRT31Q15323 416 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 MEA1Q16626 185 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 AMHR2Q16671 573 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 TCTN1Q2MV58 587 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 PAPD7Q5XG87 772 aaKnown RBP10.82□□□□□ -0.68
PMF1-204ENST00000466489 PPP2R2DQ66LE6 453 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 KLHL10Q6JEL2 608 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 MPZL3Q6UWV2 235 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 APTXQ7Z2E3 356 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms