RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 RIN2Q8WYP3 895 aaPredicted RBP3.22□□□□□ -1.89
CCDC93-205ENST00000466171 APPBP2Q92624 585 aa3.22□□□□□ -1.89
CCDC93-205ENST00000466171 PDLIM2Q96JY6 352 aa3.22□□□□□ -1.89
CCDC93-205ENST00000466171 ZSWIM1Q9BR11 485 aa3.22□□□□□ -1.89
CCDC93-205ENST00000466171 MRI1Q9BV20 369 aa3.22□□□□□ -1.89
CCDC93-205ENST00000466171 SENP6Q9GZR1 1112 aaPredicted RBP3.22□□□□□ -1.89
CCDC93-205ENST00000466171 KLK15Q9H2R5 256 aa3.22□□□□□ -1.89
CCDC93-205ENST00000466171 KANSL2Q9H9L4 492 aa3.22□□□□□ -1.89
CCDC93-205ENST00000466171 ALG13Q9NP73 1137 aaKnown RBP3.22□□□□□ -1.89
CCDC93-205ENST00000466171 EMC7Q9NPA0 242 aa3.22□□□□□ -1.89
CCDC93-205ENST00000466171 KCTD5Q9NXV2 234 aa3.22□□□□□ -1.89
CCDC93-205ENST00000466171 FOXJ2Q9P0K8 574 aa3.22□□□□□ -1.89
CCDC93-205ENST00000466171 ZBTB21Q9ULJ3 1066 aa3.22□□□□□ -1.89
CCDC93-205ENST00000466171 LRRC3CA6NJW4 275 aa3.21□□□□□ -1.9
CCDC93-205ENST00000466171 TEX33O43247 280 aa3.21□□□□□ -1.9
CCDC93-205ENST00000466171 ALOX15P16050 662 aaPredicted RBP3.21□□□□□ -1.9
CCDC93-205ENST00000466171 HSD11B2P80365 405 aa3.21□□□□□ -1.9
CCDC93-205ENST00000466171 CDK17Q00537 523 aa3.21□□□□□ -1.9
CCDC93-205ENST00000466171 UBXN2BQ14CS0 331 aa3.21□□□□□ -1.9
CCDC93-205ENST00000466171 FSCN1Q16658 493 aaKnown RBP3.21□□□□□ -1.9
CCDC93-205ENST00000466171 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.21□□□□□ -1.9
CCDC93-205ENST00000466171 ATP13A4Q4VNC1 1196 aa3.21□□□□□ -1.9
CCDC93-205ENST00000466171 REPS2Q8NFH8 660 aa3.21□□□□□ -1.9
CCDC93-205ENST00000466171 SCARB1Q8WTV0 552 aa3.21□□□□□ -1.9
CCDC93-205ENST00000466171 FATE1Q969F0 183 aa3.21□□□□□ -1.9
CCDC93-205ENST00000466171 EAF2Q96CJ1 260 aaPredicted RBP3.21□□□□□ -1.9
CCDC93-205ENST00000466171 UROC1Q96N76 676 aa3.21□□□□□ -1.9
CCDC93-205ENST00000466171 LANCL2Q9NS86 450 aa3.21□□□□□ -1.9
CCDC93-205ENST00000466171 TMEM140Q9NV12 185 aa3.21□□□□□ -1.9
CCDC93-205ENST00000466171 FAM30AQ9NZY2 134 aa3.21□□□□□ -1.9
CCDC93-205ENST00000466171 DPP7Q9UHL4 492 aa3.21□□□□□ -1.9
CCDC93-205ENST00000466171 PLAAQ9Y263 795 aa3.21□□□□□ -1.9
CCDC93-205ENST00000466171 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.2□□□□□ -1.9
CCDC93-205ENST00000466171 FAM83GA6ND36 823 aa3.2□□□□□ -1.9
CCDC93-205ENST00000466171 MGST3O14880 152 aa3.2□□□□□ -1.9
CCDC93-205ENST00000466171 IKBKBO14920 756 aa3.2□□□□□ -1.9
CCDC93-205ENST00000466171 ULK1O75385 1050 aa3.2□□□□□ -1.9
CCDC93-205ENST00000466171 ZFPL1O95159 310 aa3.2□□□□□ -1.9
CCDC93-205ENST00000466171 CKBP12277 381 aa3.2□□□□□ -1.9
CCDC93-205ENST00000466171 ALAS1P13196 640 aa3.2□□□□□ -1.9
CCDC93-205ENST00000466171 MTHFD2P13995 350 aa3.2□□□□□ -1.9
CCDC93-205ENST00000466171 ZNF81P51508 661 aa3.2□□□□□ -1.9
CCDC93-205ENST00000466171 VAV2P52735 878 aa3.2□□□□□ -1.9
CCDC93-205ENST00000466171 CYP2A13Q16696 494 aa3.2□□□□□ -1.9
CCDC93-205ENST00000466171 AFMIDQ63HM1 303 aa3.2□□□□□ -1.9
CCDC93-205ENST00000466171 DHX37Q8IY37 1157 aaKnown RBP3.2□□□□□ -1.9
CCDC93-205ENST00000466171 PQLC1Q8N2U9 271 aa3.2□□□□□ -1.9
CCDC93-205ENST00000466171 LNX2Q8N448 690 aa3.2□□□□□ -1.9
CCDC93-205ENST00000466171 SREK1Q8WXA9 508 aaKnown RBP3.2□□□□□ -1.9
CCDC93-205ENST00000466171 ANKS1AQ92625 1134 aa3.2□□□□□ -1.9
CCDC93-205ENST00000466171 USP7Q93009 1102 aa3.2□□□□□ -1.9
CCDC93-205ENST00000466171 MED15Q96RN5 788 aa3.2□□□□□ -1.9
CCDC93-205ENST00000466171 PNKPQ96T60 521 aa3.2□□□□□ -1.9
CCDC93-205ENST00000466171 TARS2Q9BW92 718 aaKnown RBP3.2□□□□□ -1.9
CCDC93-205ENST00000466171 PRDM12Q9H4Q4 367 aa3.2□□□□□ -1.9
CCDC93-205ENST00000466171 UNKLQ9H9P5 680 aaKnown RBP3.2□□□□□ -1.9
CCDC93-205ENST00000466171 ASB6Q9NWX5 421 aa3.2□□□□□ -1.9
CCDC93-205ENST00000466171 ARHGEF17Q96PE2 2063 aaPredicted RBP3.2□□□□□ -1.9
CCDC93-205ENST00000466171 PNPLA7Q6ZV29 1317 aa3.19□□□□□ -1.9
CCDC93-205ENST00000466171 TRGV11A0A075B6L2 103 aa3.19□□□□□ -1.9
CCDC93-205ENST00000466171 C1QL1O75973 258 aa3.19□□□□□ -1.9
CCDC93-205ENST00000466171 ENDOD1O94919 500 aa3.19□□□□□ -1.9
CCDC93-205ENST00000466171 GPD1P21695 349 aa3.19□□□□□ -1.9
CCDC93-205ENST00000466171 ENPP1P22413 925 aa3.19□□□□□ -1.9
CCDC93-205ENST00000466171 FOLR3P41439 243 aa3.19□□□□□ -1.9
CCDC93-205ENST00000466171 SESN3P58005 492 aa3.19□□□□□ -1.9
CCDC93-205ENST00000466171 MRPS9P82933 396 aaKnown RBP3.19□□□□□ -1.9
CCDC93-205ENST00000466171 SEPT7Q16181 437 aaKnown RBP3.19□□□□□ -1.9
CCDC93-205ENST00000466171 ATP2B3Q16720 1220 aa3.19□□□□□ -1.9
CCDC93-205ENST00000466171 MUM1L1Q5H9M0 696 aa3.19□□□□□ -1.9
CCDC93-205ENST00000466171 OTUD7BQ6GQQ9 843 aa3.19□□□□□ -1.9
CCDC93-205ENST00000466171 ZNF529Q6P280 563 aa3.19□□□□□ -1.9
CCDC93-205ENST00000466171 ZNF788Q6ZQV5 615 aa3.19□□□□□ -1.9
CCDC93-205ENST00000466171 FBXO18Q8NFZ0 1043 aa3.19□□□□□ -1.9
CCDC93-205ENST00000466171 LEO1Q8WVC0 666 aaPredicted RBP3.19□□□□□ -1.9
CCDC93-205ENST00000466171 AUTS2Q8WXX7 1259 aa3.19□□□□□ -1.9
CCDC93-205ENST00000466171 MFSD3Q96ES6 412 aa3.19□□□□□ -1.9
CCDC93-205ENST00000466171 C1QTNF7Q9BXJ2 289 aa3.19□□□□□ -1.9
CCDC93-205ENST00000466171 GREM2Q9H772 168 aa3.19□□□□□ -1.9
CCDC93-205ENST00000466171 CPNE5Q9HCH3 593 aa3.19□□□□□ -1.9
CCDC93-205ENST00000466171 RBM12Q9NTZ6 932 aaKnown RBP3.19□□□□□ -1.9
CCDC93-205ENST00000466171 ARPP21Q9UBL0 812 aaPredicted RBP3.19□□□□□ -1.9
CCDC93-205ENST00000466171 ATRNL1Q5VV63 1379 aa3.19□□□□□ -1.9
CCDC93-205ENST00000466171 AATKQ6ZMQ8 1374 aa3.19□□□□□ -1.9
CCDC93-205ENST00000466171 SREBF1P36956 1147 aa3.18□□□□□ -1.9
CCDC93-205ENST00000466171 SOX10P56693 466 aa3.18□□□□□ -1.9
CCDC93-205ENST00000466171 PDCD1Q15116 288 aa3.18□□□□□ -1.9
CCDC93-205ENST00000466171 EZH2Q15910 746 aaKnown RBP3.18□□□□□ -1.9
CCDC93-205ENST00000466171 SRSF7Q16629 238 aaKnown RBP eCLIP3.18□□□□□ -1.9
CCDC93-205ENST00000466171 NBPF8Q3BBV2 869 aa3.18□□□□□ -1.9
CCDC93-205ENST00000466171 SH2D3CQ8N5H7 860 aa3.18□□□□□ -1.9
CCDC93-205ENST00000466171 FITM2Q8N6M3 262 aa3.18□□□□□ -1.9
CCDC93-205ENST00000466171 SSH3Q8TE77 659 aa3.18□□□□□ -1.9
CCDC93-205ENST00000466171 NUP133Q8WUM0 1156 aa3.18□□□□□ -1.9
CCDC93-205ENST00000466171 CASKIN2Q8WXE0 1202 aa3.18□□□□□ -1.9
CCDC93-205ENST00000466171 NACC2Q96BF6 587 aa3.18□□□□□ -1.9
CCDC93-205ENST00000466171 TIMP4Q99727 224 aa3.18□□□□□ -1.9
CCDC93-205ENST00000466171 ADI1Q9BV57 179 aa3.18□□□□□ -1.9
CCDC93-205ENST00000466171 FANCLQ9NW38 375 aa3.18□□□□□ -1.9
CCDC93-205ENST00000466171 USP25Q9UHP3 1055 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms