RNA–Protein interactions for RNA: ENST00000465223.1

NCSTN-210, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-210ENST00000465223 SMARCD2Q92925 531 aa16.79■□□□□ 0.28
NCSTN-210ENST00000465223 ZC3H10Q96K80 434 aaKnown RBP16.79■□□□□ 0.28
NCSTN-210ENST00000465223 TRIM6Q9C030 488 aaPredicted RBP16.79■□□□□ 0.28
NCSTN-210ENST00000465223 MTRRQ9UBK8 725 aa16.79■□□□□ 0.28
NCSTN-210ENST00000465223 PARP2Q9UGN5 583 aa16.79■□□□□ 0.28
NCSTN-210ENST00000465223 GPSM3Q9Y4H4 160 aa16.79■□□□□ 0.28
NCSTN-210ENST00000465223 LAMA1P25391 3075 aa16.78■□□□□ 0.28
NCSTN-210ENST00000465223 LNP1A1A4G5 178 aa16.78■□□□□ 0.28
NCSTN-210ENST00000465223 CYSRT1A8MQ03 144 aa16.78■□□□□ 0.28
NCSTN-210ENST00000465223 HEPACAM2A8MVW5 462 aa16.78■□□□□ 0.28
NCSTN-210ENST00000465223 PSMD10O75832 226 aa16.78■□□□□ 0.28
NCSTN-210ENST00000465223 LRG1P02750 347 aa16.78■□□□□ 0.28
NCSTN-210ENST00000465223 GJA1P17302 382 aa16.78■□□□□ 0.28
NCSTN-210ENST00000465223 IGFBP6P24592 240 aaPredicted RBP16.78■□□□□ 0.28
NCSTN-210ENST00000465223 AXLP30530 894 aa16.78■□□□□ 0.28
NCSTN-210ENST00000465223 CREB5Q02930 508 aa16.78■□□□□ 0.28
NCSTN-210ENST00000465223 TUSC3Q13454 348 aa16.78■□□□□ 0.28
NCSTN-210ENST00000465223 PON2Q15165 354 aa16.78■□□□□ 0.28
NCSTN-210ENST00000465223 COL28A1Q2UY09 1125 aa16.78■□□□□ 0.28
NCSTN-210ENST00000465223 MFSD6LQ8IWD5 586 aa16.78■□□□□ 0.28
NCSTN-210ENST00000465223 HS6ST3Q8IZP7 471 aa16.78■□□□□ 0.28
NCSTN-210ENST00000465223 RSPRY1Q96DX4 576 aa16.78■□□□□ 0.28
NCSTN-210ENST00000465223 CCDC51Q96ER9 411 aa16.78■□□□□ 0.28
NCSTN-210ENST00000465223 CCDC136Q96JN2 1154 aa16.78■□□□□ 0.28
NCSTN-210ENST00000465223 RBM28Q9NW13 759 aaKnown RBP16.78■□□□□ 0.28
NCSTN-210ENST00000465223 MSRB2Q9Y3D2 182 aa16.78■□□□□ 0.28
NCSTN-210ENST00000465223 RBM8AQ9Y5S9 174 aaKnown RBP16.78■□□□□ 0.28
NCSTN-210ENST00000465223 ATG2BQ96BY7 2078 aa16.77■□□□□ 0.28
NCSTN-210ENST00000465223 NUP205Q92621 2012 aa16.77■□□□□ 0.28
NCSTN-210ENST00000465223 SPECC1L-ADORA2AF8WAN1 911 aa16.77■□□□□ 0.28
NCSTN-210ENST00000465223 MOSPD3O75425 235 aa16.77■□□□□ 0.28
NCSTN-210ENST00000465223 NPTXRO95502 500 aa16.77■□□□□ 0.28
NCSTN-210ENST00000465223 CSRP1P21291 193 aaKnown RBP16.77■□□□□ 0.28
NCSTN-210ENST00000465223 MLLT6P55198 1093 aaPredicted RBP16.77■□□□□ 0.28
NCSTN-210ENST00000465223 PDXDC1Q6P996 788 aa16.77■□□□□ 0.28
NCSTN-210ENST00000465223 PDZD4Q76G19 769 aaPredicted RBP16.77■□□□□ 0.28
NCSTN-210ENST00000465223 RTL10Q7L3V2 364 aa16.77■□□□□ 0.28
NCSTN-210ENST00000465223 PROSER1Q86XN7 944 aa16.77■□□□□ 0.28
NCSTN-210ENST00000465223 SMC5Q8IY18 1101 aa16.77■□□□□ 0.28
NCSTN-210ENST00000465223 HACE1Q8IYU2 909 aa16.77■□□□□ 0.28
NCSTN-210ENST00000465223 REXO1Q8N1G1 1221 aaKnown RBP16.77■□□□□ 0.28
NCSTN-210ENST00000465223 RDM1Q8NG50 284 aa16.77■□□□□ 0.28
NCSTN-210ENST00000465223 ZSCAN18Q8TBC5 510 aaPredicted RBP16.77■□□□□ 0.28
NCSTN-210ENST00000465223 SLC7A3Q8WY07 619 aa16.77■□□□□ 0.28
NCSTN-210ENST00000465223 DUSP15Q9H1R2 295 aaPredicted RBP16.77■□□□□ 0.28
NCSTN-210ENST00000465223 CXCL16Q9H2A7 254 aa16.77■□□□□ 0.28
NCSTN-210ENST00000465223 ASH1LQ9NR48 2969 aaKnown RBP16.76■□□□□ 0.27
NCSTN-210ENST00000465223 ITPR1Q14643 2758 aa16.76■□□□□ 0.27
NCSTN-210ENST00000465223 ARHGEF37A1IGU5 675 aa16.76■□□□□ 0.27
NCSTN-210ENST00000465223 ZNF197O14709 1029 aa16.76■□□□□ 0.27
NCSTN-210ENST00000465223 CAVIN2O95810 425 aa16.76■□□□□ 0.27
NCSTN-210ENST00000465223 ARF4P18085 180 aaPredicted RBP16.76■□□□□ 0.27
NCSTN-210ENST00000465223 CTHP32929 405 aa16.76■□□□□ 0.27
NCSTN-210ENST00000465223 SPIRE1Q08AE8 756 aa16.76■□□□□ 0.27
NCSTN-210ENST00000465223 CCINQ13939 588 aa16.76■□□□□ 0.27
NCSTN-210ENST00000465223 RTN1Q16799 776 aa16.76■□□□□ 0.27
NCSTN-210ENST00000465223 B3GNT9Q6UX72 402 aa16.76■□□□□ 0.27
NCSTN-210ENST00000465223 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.76■□□□□ 0.27
NCSTN-210ENST00000465223 FERMT3Q86UX7 667 aa16.76■□□□□ 0.27
NCSTN-210ENST00000465223 SGMS1Q86VZ5 419 aa16.76■□□□□ 0.27
NCSTN-210ENST00000465223 GPIHBP1Q8IV16 184 aa16.76■□□□□ 0.27
NCSTN-210ENST00000465223 MSANTD3Q96H12 275 aa16.76■□□□□ 0.27
NCSTN-210ENST00000465223 ZMYND12Q9H0C1 365 aa16.76■□□□□ 0.27
NCSTN-210ENST00000465223 DHX33Q9H6R0 707 aaKnown RBP16.76■□□□□ 0.27
NCSTN-210ENST00000465223 C8orf33Q9H7E9 229 aaPredicted RBP16.76■□□□□ 0.27
NCSTN-210ENST00000465223 POLR3BQ9NW08 1133 aaPredicted RBP16.76■□□□□ 0.27
NCSTN-210ENST00000465223 SNTG2Q9NY99 539 aa16.76■□□□□ 0.27
NCSTN-210ENST00000465223 MYBPHLA2RUH7 354 aa16.75■□□□□ 0.27
NCSTN-210ENST00000465223 INO80B-WBP1J3KQ70 363 aa16.75■□□□□ 0.27
NCSTN-210ENST00000465223 CDX4O14627 284 aaPredicted RBP16.75■□□□□ 0.27
NCSTN-210ENST00000465223 DCLK1O15075 740 aa16.75■□□□□ 0.27
NCSTN-210ENST00000465223 B4GALT5O43286 388 aa16.75■□□□□ 0.27
NCSTN-210ENST00000465223 MICAL2O94851 1124 aa16.75■□□□□ 0.27
NCSTN-210ENST00000465223 CAPNS1P04632 268 aa16.75■□□□□ 0.27
NCSTN-210ENST00000465223 FGFR3P22607 806 aa16.75■□□□□ 0.27
NCSTN-210ENST00000465223 PSMC5P62195 406 aa16.75■□□□□ 0.27
NCSTN-210ENST00000465223 AMHR2Q16671 573 aa16.75■□□□□ 0.27
NCSTN-210ENST00000465223 UAP1L1Q3KQV9 507 aa16.75■□□□□ 0.27
NCSTN-210ENST00000465223 C1orf228Q6PIY5 440 aa16.75■□□□□ 0.27
NCSTN-210ENST00000465223 APOA5Q6Q788 366 aa16.75■□□□□ 0.27
NCSTN-210ENST00000465223 SYNE3Q6ZMZ3 975 aa16.75■□□□□ 0.27
NCSTN-210ENST00000465223 YAF2Q8IY57 180 aa16.75■□□□□ 0.27
NCSTN-210ENST00000465223 CEP170P1Q96L14 293 aa16.75■□□□□ 0.27
NCSTN-210ENST00000465223 C6orf50Q9HD87 102 aa16.75■□□□□ 0.27
NCSTN-210ENST00000465223 TMEM9BQ9NQ34 198 aa16.75■□□□□ 0.27
NCSTN-210ENST00000465223 ANKFY1Q9P2R3 1169 aa16.75■□□□□ 0.27
NCSTN-210ENST00000465223 CCDC163A0A0D9SF12 145 aa16.74■□□□□ 0.27
NCSTN-210ENST00000465223 ESYT2A0FGR8 921 aa16.74■□□□□ 0.27
NCSTN-210ENST00000465223 BCLAF3A2AJT9 711 aaKnown RBP16.74■□□□□ 0.27
NCSTN-210ENST00000465223 PRRG1O14668 218 aa16.74■□□□□ 0.27
NCSTN-210ENST00000465223 PTGESO14684 152 aa16.74■□□□□ 0.27
NCSTN-210ENST00000465223 AKAP3O75969 853 aa16.74■□□□□ 0.27
NCSTN-210ENST00000465223 GSPT1P15170 499 aaKnown RBP16.74■□□□□ 0.27
NCSTN-210ENST00000465223 CHMLP26374 656 aa16.74■□□□□ 0.27
NCSTN-210ENST00000465223 TKTP29401 623 aaKnown RBP16.74■□□□□ 0.27
NCSTN-210ENST00000465223 PTENP60484 403 aa16.74■□□□□ 0.27
NCSTN-210ENST00000465223 FGD1P98174 961 aa16.74■□□□□ 0.27
NCSTN-210ENST00000465223 NUCB1Q02818 461 aa16.74■□□□□ 0.27
NCSTN-210ENST00000465223 NCBP1Q09161 790 aaKnown RBP16.74■□□□□ 0.27
NCSTN-210ENST00000465223 ELAVL2Q12926 359 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms