RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 AUTS2Q8WXX7 1259 aa19.28■□□□□ 0.68
VPS52-214ENST00000463486 PABPC5Q96DU9 382 aaKnown RBP19.28■□□□□ 0.68
VPS52-214ENST00000463486 CBWD1Q9BRT8 395 aa19.28■□□□□ 0.68
VPS52-214ENST00000463486 COLEC11Q9BWP8 271 aa19.28■□□□□ 0.68
VPS52-214ENST00000463486 SLC39A2Q9NP94 309 aa19.28■□□□□ 0.68
VPS52-214ENST00000463486 CHST7Q9NS84 486 aa19.28■□□□□ 0.68
VPS52-214ENST00000463486 ADAM28Q9UKQ2 775 aa19.28■□□□□ 0.68
VPS52-214ENST00000463486 AGO2Q9UKV8 859 aaKnown RBP19.28■□□□□ 0.68
VPS52-214ENST00000463486 TMEM189-UBE2V1I3L0A0 370 aa19.27■□□□□ 0.68
VPS52-214ENST00000463486 NR1I2O75469 434 aa19.27■□□□□ 0.68
VPS52-214ENST00000463486 SOD2P04179 222 aa19.27■□□□□ 0.68
VPS52-214ENST00000463486 NRIP1P48552 1158 aa19.27■□□□□ 0.68
VPS52-214ENST00000463486 CLCNKBP51801 687 aa19.27■□□□□ 0.68
VPS52-214ENST00000463486 POU5F1Q01860 360 aaKnown RBP19.27■□□□□ 0.68
VPS52-214ENST00000463486 TFF2Q03403 129 aa19.27■□□□□ 0.68
VPS52-214ENST00000463486 SPAG1Q07617 926 aa19.27■□□□□ 0.68
VPS52-214ENST00000463486 DLX2Q07687 328 aaPredicted RBP19.27■□□□□ 0.68
VPS52-214ENST00000463486 POSTNQ15063 836 aa19.27■□□□□ 0.68
VPS52-214ENST00000463486 PTPN14Q15678 1187 aa19.27■□□□□ 0.68
VPS52-214ENST00000463486 DUSP6Q16828 381 aa19.27■□□□□ 0.68
VPS52-214ENST00000463486 KIAA0319Q5VV43 1072 aa19.27■□□□□ 0.68
VPS52-214ENST00000463486 RBM23Q86U06 439 aaKnown RBP19.27■□□□□ 0.68
VPS52-214ENST00000463486 C3orf58Q8NDZ4 430 aa19.27■□□□□ 0.68
VPS52-214ENST00000463486 POMGNT1Q8WZA1 660 aa19.27■□□□□ 0.68
VPS52-214ENST00000463486 HLA-CQ95604 372 aa19.27■□□□□ 0.68
VPS52-214ENST00000463486 UBE2ZQ9H832 354 aaPredicted RBP19.27■□□□□ 0.68
VPS52-214ENST00000463486 ENTPD7Q9NQZ7 604 aa19.27■□□□□ 0.68
VPS52-214ENST00000463486 COG5Q9UP83 839 aa19.27■□□□□ 0.68
VPS52-214ENST00000463486 PDCD11Q14690 1871 aaKnown RBP19.26■□□□□ 0.67
VPS52-214ENST00000463486 PER2O15055 1255 aa19.26■□□□□ 0.67
VPS52-214ENST00000463486 CXCL14O95715 111 aa19.26■□□□□ 0.67
VPS52-214ENST00000463486 GLP2RO95838 553 aa19.26■□□□□ 0.67
VPS52-214ENST00000463486 RPN1P04843 607 aaKnown RBP19.26■□□□□ 0.67
VPS52-214ENST00000463486 WNT7BP56706 349 aa19.26■□□□□ 0.67
VPS52-214ENST00000463486 RBM10P98175 930 aaKnown RBP19.26■□□□□ 0.67
VPS52-214ENST00000463486 PSMD2Q13200 908 aa19.26■□□□□ 0.67
VPS52-214ENST00000463486 SMC1AQ14683 1233 aaKnown RBP19.26■□□□□ 0.67
VPS52-214ENST00000463486 SKIV2LQ15477 1246 aaKnown RBP19.26■□□□□ 0.67
VPS52-214ENST00000463486 FUT10Q6P4F1 479 aa19.26■□□□□ 0.67
VPS52-214ENST00000463486 DCLRE1AQ6PJP8 1040 aa19.26■□□□□ 0.67
VPS52-214ENST00000463486 CLEC17AQ6ZS10 378 aa19.26■□□□□ 0.67
VPS52-214ENST00000463486 EFHBQ8N7U6 833 aa19.26■□□□□ 0.67
VPS52-214ENST00000463486 HERC2P3Q9BVR0 1158 aa19.26■□□□□ 0.67
VPS52-214ENST00000463486 TLE6Q9H808 572 aa19.26■□□□□ 0.67
VPS52-214ENST00000463486 STK39Q9UEW8 545 aa19.26■□□□□ 0.67
VPS52-214ENST00000463486 GOLGA6L4A6NEF3 574 aa19.25■□□□□ 0.67
VPS52-214ENST00000463486 NCK2O43639 380 aa19.25■□□□□ 0.67
VPS52-214ENST00000463486 RHOBTB3O94955 611 aa19.25■□□□□ 0.67
VPS52-214ENST00000463486 STXBP4Q6ZWJ1 553 aa19.25■□□□□ 0.67
VPS52-214ENST00000463486 SYCP3Q8IZU3 236 aa19.25■□□□□ 0.67
VPS52-214ENST00000463486 SPATA20Q8TB22 786 aa19.25■□□□□ 0.67
VPS52-214ENST00000463486 SAAL1Q96ER3 474 aa19.25■□□□□ 0.67
VPS52-214ENST00000463486 B3GALT6Q96L58 329 aa19.25■□□□□ 0.67
VPS52-214ENST00000463486 TIGD1Q96MW7 591 aa19.25■□□□□ 0.67
VPS52-214ENST00000463486 UROC1Q96N76 676 aa19.25■□□□□ 0.67
VPS52-214ENST00000463486 IPO9Q96P70 1041 aaKnown RBP19.25■□□□□ 0.67
VPS52-214ENST00000463486 IGFLR1Q9H665 355 aa19.25■□□□□ 0.67
VPS52-214ENST00000463486 RPF1Q9H9Y2 349 aaKnown RBP19.25■□□□□ 0.67
VPS52-214ENST00000463486 SLC38A7Q9NVC3 462 aa19.25■□□□□ 0.67
VPS52-214ENST00000463486 CLEC1BQ9P126 229 aa19.25■□□□□ 0.67
VPS52-214ENST00000463486 THEGQ9P2T0 379 aa19.25■□□□□ 0.67
VPS52-214ENST00000463486 TUBGCP4Q9UGJ1 667 aa19.25■□□□□ 0.67
VPS52-214ENST00000463486 BDP1A6H8Y1 2624 aa19.25■□□□□ 0.67
VPS52-214ENST00000463486 UBE4BO95155 1302 aa19.25■□□□□ 0.67
VPS52-214ENST00000463486 CUL9Q8IWT3 2517 aa19.24■□□□□ 0.67
VPS52-214ENST00000463486 TADA2AO75478 443 aa19.24■□□□□ 0.67
VPS52-214ENST00000463486 CYP3A5P20815 502 aa19.24■□□□□ 0.67
VPS52-214ENST00000463486 DSG1Q02413 1049 aa19.24■□□□□ 0.67
VPS52-214ENST00000463486 KANK3Q6NY19 840 aa19.24■□□□□ 0.67
VPS52-214ENST00000463486 TMEM184AQ6ZMB5 413 aa19.24■□□□□ 0.67
VPS52-214ENST00000463486 CD302Q8IX05 232 aa19.24■□□□□ 0.67
VPS52-214ENST00000463486 HASPINQ8TF76 798 aa19.24■□□□□ 0.67
VPS52-214ENST00000463486 ATXN2LQ8WWM7 1075 aaKnown RBP19.24■□□□□ 0.67
VPS52-214ENST00000463486 DDX27Q96GQ7 796 aaKnown RBP19.24■□□□□ 0.67
VPS52-214ENST00000463486 FBXL18Q96ME1 805 aa19.24■□□□□ 0.67
VPS52-214ENST00000463486 TSPAN18Q96SJ8 248 aa19.24■□□□□ 0.67
VPS52-214ENST00000463486 CDCA3Q99618 268 aaPredicted RBP19.24■□□□□ 0.67
VPS52-214ENST00000463486 RXFP1Q9HBX9 757 aa19.24■□□□□ 0.67
VPS52-214ENST00000463486 AGPAT3Q9NRZ7 376 aa19.24■□□□□ 0.67
VPS52-214ENST00000463486 ANK1P16157 1881 aa19.24■□□□□ 0.67
VPS52-214ENST00000463486 EXTL3O43909 919 aa19.23■□□□□ 0.67
VPS52-214ENST00000463486 CLASP2O75122 1294 aaKnown RBP19.23■□□□□ 0.67
VPS52-214ENST00000463486 TBX10O75333 385 aa19.23■□□□□ 0.67
VPS52-214ENST00000463486 LRPAP1P30533 357 aa19.23■□□□□ 0.67
VPS52-214ENST00000463486 RPL9P32969 192 aaKnown RBP19.23■□□□□ 0.67
VPS52-214ENST00000463486 PPP2R3AQ06190 1150 aa19.23■□□□□ 0.67
VPS52-214ENST00000463486 PNOCQ13519 176 aa19.23■□□□□ 0.67
VPS52-214ENST00000463486 KCNB1Q14721 858 aa19.23■□□□□ 0.67
VPS52-214ENST00000463486 KNOP1Q1ED39 458 aaKnown RBP19.23■□□□□ 0.67
VPS52-214ENST00000463486 SPATA1Q5VX52 437 aa19.23■□□□□ 0.67
VPS52-214ENST00000463486 JADE1Q6IE81 842 aa19.23■□□□□ 0.67
VPS52-214ENST00000463486 NELFCDQ8IXH7 590 aa19.23■□□□□ 0.67
VPS52-214ENST00000463486 ELOA2Q8IYF1 753 aaPredicted RBP19.23■□□□□ 0.67
VPS52-214ENST00000463486 GPR65Q8IYL9 337 aa19.23■□□□□ 0.67
VPS52-214ENST00000463486 KIF12Q96FN5 646 aa19.23■□□□□ 0.67
VPS52-214ENST00000463486 MSLNLQ96KJ4 702 aa19.23■□□□□ 0.67
VPS52-214ENST00000463486 FAM213AQ9BRX8 229 aa19.23■□□□□ 0.67
VPS52-214ENST00000463486 KCTD10Q9H3F6 313 aa19.23■□□□□ 0.67
VPS52-214ENST00000463486 PCIF1Q9H4Z3 704 aa19.23■□□□□ 0.67
VPS52-214ENST00000463486 ASB7Q9H672 318 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms