RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 IGSF21Q96ID5 467 aa12.67□□□□□ -0.38
TRAF3IP1-204ENST00000462122 FBXL18Q96ME1 805 aa12.67□□□□□ -0.38
TRAF3IP1-204ENST00000462122 ZMAT2Q96NC0 199 aaKnown RBP12.67□□□□□ -0.38
TRAF3IP1-204ENST00000462122 COLEC11Q9BWP8 271 aa12.67□□□□□ -0.38
TRAF3IP1-204ENST00000462122 CXCL16Q9H2A7 254 aa12.67□□□□□ -0.38
TRAF3IP1-204ENST00000462122 UBQLN1Q9UMX0 589 aaKnown RBP12.67□□□□□ -0.38
TRAF3IP1-204ENST00000462122 MAPK8IP1Q9UQF2 711 aa12.67□□□□□ -0.38
TRAF3IP1-204ENST00000462122 C2CD2Q9Y426 696 aa12.67□□□□□ -0.38
TRAF3IP1-204ENST00000462122 KIAA1671Q9BY89 1806 aa12.67□□□□□ -0.38
TRAF3IP1-204ENST00000462122 GOLGA8IPA6NC78 632 aa12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 CASTOR2A6NHX0 329 aa12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 ZNF233A6NK53 670 aa12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 GOLGA8JA6NMD2 632 aa12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 NT5C1B-RDH14C9J2C7 533 aa12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 RFXAPO00287 272 aa12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 PSMA7O14818 248 aa12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 CLIC2O15247 247 aa12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 GRM6O15303 877 aa12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 EXOC3O60645 756 aa12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 FOSL2P15408 326 aa12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 POU3F3P20264 500 aaPredicted RBP12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 PRCPP42785 496 aa12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 CYP2J2P51589 502 aa12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 MORC3Q14149 939 aa12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 SURF1Q15526 300 aa12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 SNRNP35Q16560 246 aaKnown RBP12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 NFIL3Q16649 462 aa12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 SPPL3Q8TCT6 385 aa12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 NOC3LQ8WTT2 800 aaKnown RBP12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 POF1BQ8WVV4 589 aa12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 MYLIPQ8WY64 445 aa12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 FAM212AQ96EL1 285 aa12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 DDX27Q96GQ7 796 aaKnown RBP12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 ALG13Q9NP73 1137 aaKnown RBP12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 PRG3Q9Y2Y8 225 aaPredicted RBP12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 COL4A4P53420 1690 aaPredicted RBP12.66□□□□□ -0.38
TRAF3IP1-204ENST00000462122 SPTBN5Q9NRC6 3674 aaKnown RBP12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 TMEM189-UBE2V1I3L0A0 370 aa12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 NR3C1P04150 777 aa12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 IGFBP4P22692 258 aa12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 RPL13P26373 211 aaKnown RBP12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 RPL9P32969 192 aaKnown RBP12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 ADGRE1Q14246 886 aa12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 BMS1Q14692 1282 aaKnown RBP12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 TMEM132DQ14C87 1099 aa12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 ZBTB6Q15916 424 aa12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 EDRF1Q3B7T1 1238 aa12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 ZCWPW2Q504Y3 356 aa12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 TIGD5Q53EQ6 642 aa12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 JADE1Q6IE81 842 aa12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 PDE12Q6L8Q7 609 aaKnown RBP12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 DDX53Q86TM3 631 aaKnown RBP12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 TMEM173Q86WV6 379 aaPredicted RBP12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 CBWD2Q8IUF1 395 aa12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 ADSSL1Q8N142 457 aa12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 ZSWIM2Q8NEG5 633 aa12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 BEST2Q8NFU1 509 aa12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 MRPL38Q96DV4 380 aaKnown RBP12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 DHTKD1Q96HY7 919 aaPredicted RBP12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 TSG101Q99816 390 aa12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 TLR9Q9NR96 1032 aa12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 DMAC2Q9NW81 257 aa12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 MARCH5Q9NX47 278 aa12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 ADAM28Q9UKQ2 775 aa12.65□□□□□ -0.38
TRAF3IP1-204ENST00000462122 SF3B1O75533 1304 aaKnown RBP eCLIP12.64□□□□□ -0.396e-13■■■■■ 155.1
TRAF3IP1-204ENST00000462122 TDRD15B5MCY1 1934 aaKnown RBP12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 CITO14578 2027 aa12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 BIN1O00499 593 aa12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 PODXLO00592 558 aa12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 B3GAT3O94766 335 aa12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 KIF4AO95239 1232 aa12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 NFICP08651 508 aa12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 BMP6P22004 513 aa12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 NR2F2P24468 414 aa12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 LRPAP1P30533 357 aa12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 CLCNKBP51801 687 aa12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 LRRC63Q05C16 580 aa12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 SOX4Q06945 474 aaPredicted RBP12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 SPAG1Q07617 926 aa12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 UPP1Q16831 310 aa12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 SPATA1Q5VX52 437 aa12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 ISM2Q6H9L7 571 aa12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 CENPPQ6IPU0 288 aa12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 DCLRE1AQ6PJP8 1040 aa12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 BCL7CQ8WUZ0 217 aaPredicted RBP12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 C18orf25Q96B23 403 aaPredicted RBP12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 PAAF1Q9BRP4 392 aa12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 GOLGA2P5Q9HBQ8 144 aa12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 NGRNQ9NPE2 291 aaKnown RBP12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 TUBGCP4Q9UGJ1 667 aa12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 STXBP5LQ9Y2K9 1186 aa12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 FRMD4BQ9Y2L6 1034 aa12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 MTCH2Q9Y6C9 303 aa12.64□□□□□ -0.39
TRAF3IP1-204ENST00000462122 MAPK13O15264 365 aa12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 TRAPPC3O43617 180 aa12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 TADA2AO75478 443 aa12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 SOD2P04179 222 aa12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 PAX3P23760 479 aa12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 CCNE1P24864 410 aa12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 DNAJB1P25685 340 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms