RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 CCDC127Q96BQ5 260 aa19.66■□□□□ 0.74
HPS3-204ENST00000462030 BATF3Q9NR55 127 aa19.66■□□□□ 0.74
HPS3-204ENST00000462030 GRIN3BO60391 1043 aa19.66■□□□□ 0.74
HPS3-204ENST00000462030 GAS8O95995 478 aa19.66■□□□□ 0.74
HPS3-204ENST00000462030 WDR4P57081 412 aaKnown RBP19.66■□□□□ 0.74
HPS3-204ENST00000462030 STRN3Q13033 797 aa19.66■□□□□ 0.74
HPS3-204ENST00000462030 VPS72Q15906 364 aa19.66■□□□□ 0.74
HPS3-204ENST00000462030 KCNV2Q8TDN2 545 aa19.66■□□□□ 0.74
HPS3-204ENST00000462030 HEMGNQ9BXL5 484 aa19.66■□□□□ 0.74
HPS3-204ENST00000462030 IDI2Q9BXS1 227 aa19.66■□□□□ 0.74
HPS3-204ENST00000462030 MYLK2Q9H1R3 596 aa19.66■□□□□ 0.74
HPS3-204ENST00000462030 TOPORSQ9NS56 1045 aaPredicted RBP19.66■□□□□ 0.74
HPS3-204ENST00000462030 CDH16O75309 829 aa19.65■□□□□ 0.74
HPS3-204ENST00000462030 VIL1P09327 827 aaKnown RBP19.65■□□□□ 0.74
HPS3-204ENST00000462030 ATP2A2P16615 1042 aaKnown RBP19.65■□□□□ 0.74
HPS3-204ENST00000462030 ATP11AP98196 1134 aa19.65■□□□□ 0.74
HPS3-204ENST00000462030 TMED2Q15363 201 aa19.65■□□□□ 0.74
HPS3-204ENST00000462030 ANKRD20A2Q5SQ80 823 aa19.65■□□□□ 0.74
HPS3-204ENST00000462030 ANKRD20A1Q5TYW2 823 aa19.65■□□□□ 0.74
HPS3-204ENST00000462030 ANKRD20A3Q5VUR7 823 aa19.65■□□□□ 0.74
HPS3-204ENST00000462030 SYDE1Q6ZW31 735 aaPredicted RBP19.65■□□□□ 0.74
HPS3-204ENST00000462030 CNKSR1Q969H4 720 aa19.65■□□□□ 0.74
HPS3-204ENST00000462030 SAAL1Q96ER3 474 aa19.65■□□□□ 0.74
HPS3-204ENST00000462030 PAIP2Q9BPZ3 127 aaKnown RBP19.65■□□□□ 0.74
HPS3-204ENST00000462030 PITPNM3Q9BZ71 974 aa19.65■□□□□ 0.74
HPS3-204ENST00000462030 UBR3Q6ZT12 1888 aa19.65■□□□□ 0.74
HPS3-204ENST00000462030 SLX4Q8IY92 1834 aa19.65■□□□□ 0.74
HPS3-204ENST00000462030 TMEM150BA6NC51 233 aa19.65■□□□□ 0.74
HPS3-204ENST00000462030 TOM1O60784 492 aa19.65■□□□□ 0.74
HPS3-204ENST00000462030 ACVR2BQ13705 512 aa19.65■□□□□ 0.74
HPS3-204ENST00000462030 C2CD6Q53TS8 623 aa19.65■□□□□ 0.74
HPS3-204ENST00000462030 SAMD1Q6SPF0 538 aaPredicted RBP19.65■□□□□ 0.74
HPS3-204ENST00000462030 HAUS6Q7Z4H7 955 aa19.65■□□□□ 0.74
HPS3-204ENST00000462030 GRK7Q8WTQ7 553 aa19.65■□□□□ 0.74
HPS3-204ENST00000462030 SPOCK2Q92563 424 aa19.65■□□□□ 0.74
HPS3-204ENST00000462030 EURLQ9NYK6 297 aa19.65■□□□□ 0.74
HPS3-204ENST00000462030 USP20Q9Y2K6 914 aa19.65■□□□□ 0.74
HPS3-204ENST00000462030 MROH7Q68CQ1 1323 aa19.65■□□□□ 0.74
HPS3-204ENST00000462030 RASA4BC9J798 803 aa19.64■□□□□ 0.74
HPS3-204ENST00000462030 POLRMTO00411 1230 aaKnown RBP19.64■□□□□ 0.74
HPS3-204ENST00000462030 RASA4O43374 803 aa19.64■□□□□ 0.74
HPS3-204ENST00000462030 PLS3P13797 630 aa19.64■□□□□ 0.74
HPS3-204ENST00000462030 SKIV2L2P42285 1042 aaKnown RBP19.64■□□□□ 0.74
HPS3-204ENST00000462030 RBM26Q5T8P6 1007 aaKnown RBP19.64■□□□□ 0.74
HPS3-204ENST00000462030 TRMT1LQ7Z2T5 733 aaKnown RBP19.64■□□□□ 0.74
HPS3-204ENST00000462030 GPRC5CQ9NQ84 441 aa19.64■□□□□ 0.74
HPS3-204ENST00000462030 NEU2Q9Y3R4 380 aa19.64■□□□□ 0.74
HPS3-204ENST00000462030 KLRG2A4D1S0 409 aaPredicted RBP19.64■□□□□ 0.73
HPS3-204ENST00000462030 SLC16A4O15374 487 aa19.64■□□□□ 0.73
HPS3-204ENST00000462030 SPAG7O75391 227 aa19.64■□□□□ 0.73
HPS3-204ENST00000462030 MAN1A1P33908 653 aa19.64■□□□□ 0.73
HPS3-204ENST00000462030 CAV1Q03135 178 aa19.64■□□□□ 0.73
HPS3-204ENST00000462030 CCDC15Q0P6D6 951 aa19.64■□□□□ 0.73
HPS3-204ENST00000462030 CLEC16AQ2KHT3 1053 aa19.64■□□□□ 0.73
HPS3-204ENST00000462030 MIER3Q7Z3K6 550 aa19.64■□□□□ 0.73
HPS3-204ENST00000462030 ATL2Q8NHH9 583 aa19.64■□□□□ 0.73
HPS3-204ENST00000462030 TAS1R2Q8TE23 839 aa19.64■□□□□ 0.73
HPS3-204ENST00000462030 FBF1Q8TES7 1133 aa19.64■□□□□ 0.73
HPS3-204ENST00000462030 TMEM174Q8WUU8 243 aa19.64■□□□□ 0.73
HPS3-204ENST00000462030 DDX27Q96GQ7 796 aaKnown RBP19.64■□□□□ 0.73
HPS3-204ENST00000462030 ATRNL1Q5VV63 1379 aa19.63■□□□□ 0.73
HPS3-204ENST00000462030 RALAP11233 206 aa19.63■□□□□ 0.73
HPS3-204ENST00000462030 ALCAMQ13740 583 aa19.63■□□□□ 0.73
HPS3-204ENST00000462030 SNRNP35Q16560 246 aaKnown RBP19.63■□□□□ 0.73
HPS3-204ENST00000462030 IZUMO3Q5VZ72 239 aa19.63■□□□□ 0.73
HPS3-204ENST00000462030 CYP4F22Q6NT55 531 aa19.63■□□□□ 0.73
HPS3-204ENST00000462030 PPP1R21Q6ZMI0 780 aa19.63■□□□□ 0.73
HPS3-204ENST00000462030 ERP27Q96DN0 273 aa19.63■□□□□ 0.73
HPS3-204ENST00000462030 TMEM237Q96Q45 408 aa19.63■□□□□ 0.73
HPS3-204ENST00000462030 NKX1-2Q9UD57 310 aaPredicted RBP19.63■□□□□ 0.73
HPS3-204ENST00000462030 ZBTB21Q9ULJ3 1066 aa19.63■□□□□ 0.73
HPS3-204ENST00000462030 ZHX2Q9Y6X8 837 aa19.63■□□□□ 0.73
HPS3-204ENST00000462030 PMM2O15305 246 aa19.63■□□□□ 0.73
HPS3-204ENST00000462030 MAPTP10636 758 aaKnown RBP19.63■□□□□ 0.73
HPS3-204ENST00000462030 RARRES1P49788 294 aa19.63■□□□□ 0.73
HPS3-204ENST00000462030 GTF2BQ00403 316 aa19.63■□□□□ 0.73
HPS3-204ENST00000462030 DNAJC3Q13217 504 aa19.63■□□□□ 0.73
HPS3-204ENST00000462030 GRIPAP1Q4V328 841 aa19.63■□□□□ 0.73
HPS3-204ENST00000462030 KRT39Q6A163 491 aa19.63■□□□□ 0.73
HPS3-204ENST00000462030 SLC17A8Q8NDX2 589 aa19.63■□□□□ 0.73
HPS3-204ENST00000462030 SPDL1Q96EA4 605 aa19.63■□□□□ 0.73
HPS3-204ENST00000462030 FAM84AQ96KN4 292 aa19.63■□□□□ 0.73
HPS3-204ENST00000462030 FAM47DPA6NHR8 397 aa19.62■□□□□ 0.73
HPS3-204ENST00000462030 MAPK13O15264 365 aa19.62■□□□□ 0.73
HPS3-204ENST00000462030 KRT5P13647 590 aa19.62■□□□□ 0.73
HPS3-204ENST00000462030 ITGB5P18084 799 aa19.62■□□□□ 0.73
HPS3-204ENST00000462030 ADSSP30520 456 aa19.62■□□□□ 0.73
HPS3-204ENST00000462030 PEX3P56589 373 aa19.62■□□□□ 0.73
HPS3-204ENST00000462030 IL9RQ01113 521 aa19.62■□□□□ 0.73
HPS3-204ENST00000462030 ACER1Q8TDN7 264 aa19.62■□□□□ 0.73
HPS3-204ENST00000462030 MAIP1Q8WWC4 291 aa19.62■□□□□ 0.73
HPS3-204ENST00000462030 MAML1Q92585 1016 aa19.62■□□□□ 0.73
HPS3-204ENST00000462030 GRAMD1AQ96CP6 724 aa19.62■□□□□ 0.73
HPS3-204ENST00000462030 NT5C1BQ96P26 610 aa19.62■□□□□ 0.73
HPS3-204ENST00000462030 CHKBQ9Y259 395 aa19.62■□□□□ 0.73
HPS3-204ENST00000462030 GSTTP1A0A1W2PQM5 241 aa19.62■□□□□ 0.73
HPS3-204ENST00000462030 TARSP26639 723 aaKnown RBP19.62■□□□□ 0.73
HPS3-204ENST00000462030 POLGP54098 1239 aaPredicted RBP19.62■□□□□ 0.73
HPS3-204ENST00000462030 KLF1Q13351 362 aaPredicted RBP19.62■□□□□ 0.73
HPS3-204ENST00000462030 STAT4Q14765 748 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms