RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 SLC35C1Q96A29 364 aa16.46■□□□□ 0.23
TMEM39A-203ENST00000461654 MFSD14AQ96MC6 490 aa16.46■□□□□ 0.23
TMEM39A-203ENST00000461654 FNBP1Q96RU3 617 aa16.46■□□□□ 0.23
TMEM39A-203ENST00000461654 YME1L1Q96TA2 773 aa16.46■□□□□ 0.23
TMEM39A-203ENST00000461654 PRDM6Q9NQX0 595 aa16.46■□□□□ 0.23
TMEM39A-203ENST00000461654 THEGQ9P2T0 379 aa16.46■□□□□ 0.23
TMEM39A-203ENST00000461654 SIP14410 1827 aa16.46■□□□□ 0.23
TMEM39A-203ENST00000461654 CHD7Q9P2D1 2997 aa16.46■□□□□ 0.23
TMEM39A-203ENST00000461654 ADRB2P07550 413 aa16.45■□□□□ 0.22
TMEM39A-203ENST00000461654 ARF4P18085 180 aaPredicted RBP16.45■□□□□ 0.22
TMEM39A-203ENST00000461654 TRIM21P19474 475 aaKnown RBP16.45■□□□□ 0.22
TMEM39A-203ENST00000461654 PROZP22891 400 aa16.45■□□□□ 0.22
TMEM39A-203ENST00000461654 CD52P31358 61 aa16.45■□□□□ 0.22
TMEM39A-203ENST00000461654 ACOT2P49753 483 aa16.45■□□□□ 0.22
TMEM39A-203ENST00000461654 CYP24A1Q07973 514 aa16.45■□□□□ 0.22
TMEM39A-203ENST00000461654 DCAF4L1Q3SXM0 396 aa16.45■□□□□ 0.22
TMEM39A-203ENST00000461654 TJAP1Q5JTD0 557 aa16.45■□□□□ 0.22
TMEM39A-203ENST00000461654 NOTUMQ6P988 496 aa16.45■□□□□ 0.22
TMEM39A-203ENST00000461654 GBP6Q6ZN66 633 aa16.45■□□□□ 0.22
TMEM39A-203ENST00000461654 RTN4RL1Q86UN2 441 aaPredicted RBP16.45■□□□□ 0.22
TMEM39A-203ENST00000461654 NEK11Q8NG66 645 aa16.45■□□□□ 0.22
TMEM39A-203ENST00000461654 CCDC127Q96BQ5 260 aa16.45■□□□□ 0.22
TMEM39A-203ENST00000461654 ASB2Q96Q27 587 aa16.45■□□□□ 0.22
TMEM39A-203ENST00000461654 MMRN2Q9H8L6 949 aa16.45■□□□□ 0.22
TMEM39A-203ENST00000461654 CDHR5Q9HBB8 845 aa16.45■□□□□ 0.22
TMEM39A-203ENST00000461654 PTPRHQ9HD43 1115 aa16.45■□□□□ 0.22
TMEM39A-203ENST00000461654 RBAKQ9NYW8 714 aaPredicted RBP16.45■□□□□ 0.22
TMEM39A-203ENST00000461654 PADI3Q9ULW8 664 aa16.45■□□□□ 0.22
TMEM39A-203ENST00000461654 MYO9BQ13459 2157 aa16.44■□□□□ 0.22
TMEM39A-203ENST00000461654 UNC80Q8N2C7 3258 aa16.44■□□□□ 0.22
TMEM39A-203ENST00000461654 A0A1B0GUA9 196 aa16.44■□□□□ 0.22
TMEM39A-203ENST00000461654 GTPBP10A4D1E9 387 aaKnown RBP16.44■□□□□ 0.22
TMEM39A-203ENST00000461654 TTLL13PA6NNM8 815 aa16.44■□□□□ 0.22
TMEM39A-203ENST00000461654 UPP2O95045 317 aa16.44■□□□□ 0.22
TMEM39A-203ENST00000461654 TRIM49P0CI25 452 aa16.44■□□□□ 0.22
TMEM39A-203ENST00000461654 TRIM49CP0CI26 452 aa16.44■□□□□ 0.22
TMEM39A-203ENST00000461654 GTF2H1P32780 548 aa16.44■□□□□ 0.22
TMEM39A-203ENST00000461654 FMO5P49326 533 aa16.44■□□□□ 0.22
TMEM39A-203ENST00000461654 MRPS5P82675 430 aaKnown RBP16.44■□□□□ 0.22
TMEM39A-203ENST00000461654 MYL7Q01449 175 aa16.44■□□□□ 0.22
TMEM39A-203ENST00000461654 PSMD6Q15008 389 aa16.44■□□□□ 0.22
TMEM39A-203ENST00000461654 PTPN21Q16825 1174 aa16.44■□□□□ 0.22
TMEM39A-203ENST00000461654 HS1BP3Q53T59 392 aa16.44■□□□□ 0.22
TMEM39A-203ENST00000461654 EEF1DP3Q658K8 133 aa16.44■□□□□ 0.22
TMEM39A-203ENST00000461654 THNSL1Q8IYQ7 743 aa16.44■□□□□ 0.22
TMEM39A-203ENST00000461654 CPB2Q96IY4 423 aa16.44■□□□□ 0.22
TMEM39A-203ENST00000461654 CDT1Q9H211 546 aa16.44■□□□□ 0.22
TMEM39A-203ENST00000461654 PDZD7Q9H5P4 517 aa16.44■□□□□ 0.22
TMEM39A-203ENST00000461654 EVPLQ92817 2033 aa16.44■□□□□ 0.22
TMEM39A-203ENST00000461654 AKR1B15C9JRZ8 316 aaPredicted RBP16.43■□□□□ 0.22
TMEM39A-203ENST00000461654 P4HA2O15460 535 aa16.43■□□□□ 0.22
TMEM39A-203ENST00000461654 RPS6KA5O75582 802 aa16.43■□□□□ 0.22
TMEM39A-203ENST00000461654 CLTAP09496 248 aa16.43■□□□□ 0.22
TMEM39A-203ENST00000461654 DLATP10515 647 aaKnown RBP16.43■□□□□ 0.22
TMEM39A-203ENST00000461654 FGFR4P22455 802 aa16.43■□□□□ 0.22
TMEM39A-203ENST00000461654 TBX2Q13207 712 aaPredicted RBP16.43■□□□□ 0.22
TMEM39A-203ENST00000461654 EXOC3L4Q17RC7 722 aa16.43■□□□□ 0.22
TMEM39A-203ENST00000461654 TSR1Q2NL82 804 aaKnown RBP16.43■□□□□ 0.22
TMEM39A-203ENST00000461654 EPC2Q52LR7 807 aa16.43■□□□□ 0.22
TMEM39A-203ENST00000461654 SLC27A1Q6PCB7 646 aa16.43■□□□□ 0.22
TMEM39A-203ENST00000461654 CNGA4Q8IV77 575 aa16.43■□□□□ 0.22
TMEM39A-203ENST00000461654 ZSWIM2Q8NEG5 633 aa16.43■□□□□ 0.22
TMEM39A-203ENST00000461654 ZNF397Q8NF99 534 aaPredicted RBP16.43■□□□□ 0.22
TMEM39A-203ENST00000461654 PARD3BQ8TEW8 1205 aa16.43■□□□□ 0.22
TMEM39A-203ENST00000461654 ZNF689Q96CS4 500 aaPredicted RBP16.43■□□□□ 0.22
TMEM39A-203ENST00000461654 CCDC51Q96ER9 411 aa16.43■□□□□ 0.22
TMEM39A-203ENST00000461654 C17orf80Q9BSJ5 609 aa16.43■□□□□ 0.22
TMEM39A-203ENST00000461654 TRIM6Q9C030 488 aaPredicted RBP16.43■□□□□ 0.22
TMEM39A-203ENST00000461654 HAPLN2Q9GZV7 340 aa16.43■□□□□ 0.22
TMEM39A-203ENST00000461654 RC3H2Q9HBD1 1191 aaKnown RBP16.43■□□□□ 0.22
TMEM39A-203ENST00000461654 AGPAT5Q9NUQ2 364 aa16.43■□□□□ 0.22
TMEM39A-203ENST00000461654 COG5Q9UP83 839 aa16.43■□□□□ 0.22
TMEM39A-203ENST00000461654 PIN4Q9Y237 131 aaKnown RBP16.43■□□□□ 0.22
TMEM39A-203ENST00000461654 C5orf67F2Z3F1 127 aa16.42■□□□□ 0.22
TMEM39A-203ENST00000461654 H3BNC9 293 aa16.42■□□□□ 0.22
TMEM39A-203ENST00000461654 ABLIM1O14639 778 aa16.42■□□□□ 0.22
TMEM39A-203ENST00000461654 GPR182O15218 404 aa16.42■□□□□ 0.22
TMEM39A-203ENST00000461654 DGKIO75912 1065 aa16.42■□□□□ 0.22
TMEM39A-203ENST00000461654 IL18RAPO95256 599 aa16.42■□□□□ 0.22
TMEM39A-203ENST00000461654 TNNI1P19237 187 aa16.42■□□□□ 0.22
TMEM39A-203ENST00000461654 MXI1P50539 228 aa16.42■□□□□ 0.22
TMEM39A-203ENST00000461654 AP3M2P53677 418 aa16.42■□□□□ 0.22
TMEM39A-203ENST00000461654 POU5F1Q01860 360 aaKnown RBP16.42■□□□□ 0.22
TMEM39A-203ENST00000461654 PAK2Q13177 524 aa16.42■□□□□ 0.22
TMEM39A-203ENST00000461654 FIGNQ5HY92 759 aa16.42■□□□□ 0.22
TMEM39A-203ENST00000461654 CDR2LQ86X02 465 aaPredicted RBP16.42■□□□□ 0.22
TMEM39A-203ENST00000461654 BRSK2Q8IWQ3 736 aa16.42■□□□□ 0.22
TMEM39A-203ENST00000461654 TMEM192Q8IY95 271 aa16.42■□□□□ 0.22
TMEM39A-203ENST00000461654 FBXO22Q8NEZ5 403 aa16.42■□□□□ 0.22
TMEM39A-203ENST00000461654 CPLX3Q8WVH0 158 aa16.42■□□□□ 0.22
TMEM39A-203ENST00000461654 LINC01599Q8WXQ3 324 aa16.42■□□□□ 0.22
TMEM39A-203ENST00000461654 CCDC94Q9BW85 323 aaPredicted RBP16.42■□□□□ 0.22
TMEM39A-203ENST00000461654 LSM14BQ9BX40 385 aaKnown RBP16.42■□□□□ 0.22
TMEM39A-203ENST00000461654 TMX1Q9H3N1 280 aa16.42■□□□□ 0.22
TMEM39A-203ENST00000461654 RPF1Q9H9Y2 349 aaKnown RBP16.42■□□□□ 0.22
TMEM39A-203ENST00000461654 ERVK-5Q9HDB9 667 aa16.42■□□□□ 0.22
TMEM39A-203ENST00000461654 CPSF3Q9UKF6 684 aaKnown RBP16.42■□□□□ 0.22
TMEM39A-203ENST00000461654 MTUS1Q9ULD2 1270 aa16.42■□□□□ 0.22
TMEM39A-203ENST00000461654 LUC7L2Q9Y383 392 aaKnown RBP16.42■□□□□ 0.22
TMEM39A-203ENST00000461654 A0A0C4DFX4 3053 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms