RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 SMARCE1Q969G3 411 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 SPG21Q9NZD8 308 aa12.06□□□□□ -0.48
APTX-209ENST00000460940 CPSF3Q9UKF6 684 aaKnown RBP12.06□□□□□ -0.48
APTX-209ENST00000460940 VGLL3A8MV65 326 aa12.05□□□□□ -0.48
APTX-209ENST00000460940 TISP43B9A030 160 aa12.05□□□□□ -0.48
APTX-209ENST00000460940 TULP2O00295 520 aa12.05□□□□□ -0.48
APTX-209ENST00000460940 LPXNO60711 386 aa12.05□□□□□ -0.48
APTX-209ENST00000460940 FGF18O76093 207 aa12.05□□□□□ -0.48
APTX-209ENST00000460940 LDHAP00338 332 aaKnown RBP12.05□□□□□ -0.48
APTX-209ENST00000460940 PPP2R3AQ06190 1150 aa12.05□□□□□ -0.48
APTX-209ENST00000460940 TUSC3Q13454 348 aa12.05□□□□□ -0.48
APTX-209ENST00000460940 KNOP1Q1ED39 458 aaKnown RBP12.05□□□□□ -0.48
APTX-209ENST00000460940 ARMCX5Q6P1M9 558 aa12.05□□□□□ -0.48
APTX-209ENST00000460940 ZNF280BQ86YH2 543 aa12.05□□□□□ -0.48
APTX-209ENST00000460940 MYLIPQ8WY64 445 aa12.05□□□□□ -0.48
APTX-209ENST00000460940 PPP1R10Q96QC0 940 aaKnown RBP12.05□□□□□ -0.48
APTX-209ENST00000460940 RPF1Q9H9Y2 349 aaKnown RBP12.05□□□□□ -0.48
APTX-209ENST00000460940 PLAGL2Q9UPG8 496 aa12.05□□□□□ -0.48
APTX-209ENST00000460940 B4GALT3O60512 393 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 DDHD2O94830 711 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 ITGB1P05556 798 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 ADRB2P07550 413 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 GALTP07902 379 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 CXCL8P10145 99 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 SLC11A1P49279 550 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 KRT17Q04695 432 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 ENOX2Q16206 610 aaKnown RBP12.04□□□□□ -0.48
APTX-209ENST00000460940 SLC10A6Q3KNW5 377 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 C12orf56Q8IXR9 622 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 MRPL38Q96DV4 380 aaKnown RBP12.04□□□□□ -0.48
APTX-209ENST00000460940 TMEM169Q96HH4 297 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 UROC1Q96N76 676 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 IKZF4Q9H2S9 585 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 KIAA1586Q9HCI6 787 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 AGPAT3Q9NRZ7 376 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 MIOSQ9NXC5 875 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 CALCOCO1Q9P1Z2 691 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 DNAJB4Q9UDY4 337 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 STXBP5LQ9Y2K9 1186 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 CDH23Q9H251 3354 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 MYO9BQ13459 2157 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 SMIM28A0A1B0GU29 152 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 TTC26A0AVF1 554 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 RIOK3O14730 519 aaKnown RBP12.04□□□□□ -0.48
APTX-209ENST00000460940 TGFB1I1O43294 461 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 EXTL3O43909 919 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 ALDH2P05091 517 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 ADGRE1Q14246 886 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 NAB2Q15742 525 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 SEZ6Q53EL9 994 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 TIGD5Q53EQ6 642 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 COBLL1Q53SF7 1204 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 ZBTB41Q5SVQ8 909 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 NELFCDQ8IXH7 590 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 GUF1Q8N442 669 aaKnown RBP12.04□□□□□ -0.48
APTX-209ENST00000460940 SPPL3Q8TCT6 385 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 TMEM174Q8WUU8 243 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 IGSF21Q96ID5 467 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 CBWD1Q9BRT8 395 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 PUF60Q9UHX1 559 aaKnown RBP12.04□□□□□ -0.48
APTX-209ENST00000460940 FAN1Q9Y2M0 1017 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 DERAQ9Y315 318 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 PCDHA5Q9Y5H7 936 aa12.04□□□□□ -0.48
APTX-209ENST00000460940 RFXAPO00287 272 aa12.03□□□□□ -0.48
APTX-209ENST00000460940 PDXKO00764 312 aa12.03□□□□□ -0.48
APTX-209ENST00000460940 GRM6O15303 877 aa12.03□□□□□ -0.48
APTX-209ENST00000460940 MEFVO15553 781 aaPredicted RBP12.03□□□□□ -0.48
APTX-209ENST00000460940 XPOTO43592 962 aaKnown RBP12.03□□□□□ -0.48
APTX-209ENST00000460940 IL18RAPO95256 599 aa12.03□□□□□ -0.48
APTX-209ENST00000460940 PBX3P40426 434 aa12.03□□□□□ -0.48
APTX-209ENST00000460940 TNFSF9P41273 254 aa12.03□□□□□ -0.48
APTX-209ENST00000460940 OR1G1P47890 313 aa12.03□□□□□ -0.48
APTX-209ENST00000460940 ACOT2P49753 483 aa12.03□□□□□ -0.48
APTX-209ENST00000460940 GLRA4Q5JXX5 417 aa12.03□□□□□ -0.48
APTX-209ENST00000460940 PDE12Q6L8Q7 609 aaKnown RBP12.03□□□□□ -0.48
APTX-209ENST00000460940 BRSK2Q8IWQ3 736 aa12.03□□□□□ -0.48
APTX-209ENST00000460940 GPD1LQ8N335 351 aa12.03□□□□□ -0.48
APTX-209ENST00000460940 COLEC11Q9BWP8 271 aa12.03□□□□□ -0.48
APTX-209ENST00000460940 ASB7Q9H672 318 aa12.03□□□□□ -0.48
APTX-209ENST00000460940 HSPBP1Q9NZL4 362 aa12.03□□□□□ -0.48
APTX-209ENST00000460940 MTCH2Q9Y6C9 303 aa12.03□□□□□ -0.48
APTX-209ENST00000460940 CITO14578 2027 aa12.03□□□□□ -0.48
APTX-209ENST00000460940 TDRD15B5MCY1 1934 aaKnown RBP12.03□□□□□ -0.48
APTX-209ENST00000460940 NRP1O14786 923 aa12.02□□□□□ -0.48
APTX-209ENST00000460940 CYP3A5P20815 502 aa12.02□□□□□ -0.48
APTX-209ENST00000460940 IGFBP4P22692 258 aa12.02□□□□□ -0.48
APTX-209ENST00000460940 PPP1R2P41236 205 aa12.02□□□□□ -0.48
APTX-209ENST00000460940 ZNF658Q5TYW1 1059 aaPredicted RBP12.02□□□□□ -0.48
APTX-209ENST00000460940 NT5DC4Q86YG4 428 aa12.02□□□□□ -0.48
APTX-209ENST00000460940 KIAA1524Q8TCG1 905 aa12.02□□□□□ -0.48
APTX-209ENST00000460940 POF1BQ8WVV4 589 aa12.02□□□□□ -0.48
APTX-209ENST00000460940 SAAL1Q96ER3 474 aa12.02□□□□□ -0.48
APTX-209ENST00000460940 DDX27Q96GQ7 796 aaKnown RBP12.02□□□□□ -0.48
APTX-209ENST00000460940 FBXL18Q96ME1 805 aa12.02□□□□□ -0.48
APTX-209ENST00000460940 FAM213AQ9BRX8 229 aa12.02□□□□□ -0.48
APTX-209ENST00000460940 KCTD10Q9H3F6 313 aa12.02□□□□□ -0.48
APTX-209ENST00000460940 CLSTN2Q9H4D0 955 aa12.02□□□□□ -0.48
APTX-209ENST00000460940 ALG13Q9NP73 1137 aaKnown RBP12.02□□□□□ -0.48
APTX-209ENST00000460940 TLR9Q9NR96 1032 aa12.02□□□□□ -0.48
APTX-209ENST00000460940 PRG3Q9Y2Y8 225 aaPredicted RBP12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms