RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 ZNHIT6Q9NWK9 470 aaKnown RBP18.18■□□□□ 0.5
NELFCD-201ENST00000460601 FBXL5Q9UKA1 691 aa18.18■□□□□ 0.5
NELFCD-201ENST00000460601 A0A0U1RQG5 324 aaPredicted RBP18.17■□□□□ 0.5
NELFCD-201ENST00000460601 ENPEPQ07075 957 aa18.17■□□□□ 0.5
NELFCD-201ENST00000460601 TDRD12Q587J7 1177 aaKnown RBP18.17■□□□□ 0.5
NELFCD-201ENST00000460601 UBXN11Q5T124 520 aa18.17■□□□□ 0.5
NELFCD-201ENST00000460601 RPAINQ86UA6 219 aa18.17■□□□□ 0.5
NELFCD-201ENST00000460601 HELQQ8TDG4 1101 aa18.17■□□□□ 0.5
NELFCD-201ENST00000460601 KREMEN1Q96MU8 473 aa18.17■□□□□ 0.5
NELFCD-201ENST00000460601 ACAP3Q96P50 834 aa18.17■□□□□ 0.5
NELFCD-201ENST00000460601 TFR2Q9UP52 801 aa18.17■□□□□ 0.5
NELFCD-201ENST00000460601 MROH7Q68CQ1 1323 aa18.17■□□□□ 0.5
NELFCD-201ENST00000460601 ARVCFO00192 962 aa18.17■□□□□ 0.5
NELFCD-201ENST00000460601 GFPT2O94808 682 aa18.17■□□□□ 0.5
NELFCD-201ENST00000460601 CLSTN1O94985 981 aa18.17■□□□□ 0.5
NELFCD-201ENST00000460601 GUCY2FP51841 1108 aa18.17■□□□□ 0.5
NELFCD-201ENST00000460601 TWF2Q6IBS0 349 aaKnown RBP18.17■□□□□ 0.5
NELFCD-201ENST00000460601 TRAPPC11Q7Z392 1133 aa18.17■□□□□ 0.5
NELFCD-201ENST00000460601 APOBEC3GQ9HC16 384 aaKnown RBP18.17■□□□□ 0.5
NELFCD-201ENST00000460601 OGDHLQ9ULD0 1010 aa18.17■□□□□ 0.5
NELFCD-201ENST00000460601 PPP2R2CQ9Y2T4 447 aa18.17■□□□□ 0.5
NELFCD-201ENST00000460601 UMODL1Q5DID0 1318 aa18.16■□□□□ 0.5
NELFCD-201ENST00000460601 FAM170AA1A519 330 aa18.16■□□□□ 0.5
NELFCD-201ENST00000460601 FOXN3O00409 490 aaPredicted RBP18.16■□□□□ 0.5
NELFCD-201ENST00000460601 NDUFA10O95299 355 aa18.16■□□□□ 0.5
NELFCD-201ENST00000460601 CKBP12277 381 aa18.16■□□□□ 0.5
NELFCD-201ENST00000460601 CD52P31358 61 aa18.16■□□□□ 0.5
NELFCD-201ENST00000460601 EIF4A3P38919 411 aaKnown RBP18.16■□□□□ 0.5
NELFCD-201ENST00000460601 GRM5P41594 1212 aa18.16■□□□□ 0.5
NELFCD-201ENST00000460601 ATN1P54259 1190 aaPredicted RBP18.16■□□□□ 0.5
NELFCD-201ENST00000460601 NCOA4Q13772 614 aa18.16■□□□□ 0.5
NELFCD-201ENST00000460601 PCBP1Q15365 356 aaKnown RBP eCLIP18.16■□□□□ 0.5
NELFCD-201ENST00000460601 DCAF4L1Q3SXM0 396 aa18.16■□□□□ 0.5
NELFCD-201ENST00000460601 GLRA4Q5JXX5 417 aa18.16■□□□□ 0.5
NELFCD-201ENST00000460601 IRF2BP2Q7Z5L9 587 aa18.16■□□□□ 0.5
NELFCD-201ENST00000460601 CTU1Q7Z7A3 348 aaKnown RBP18.16■□□□□ 0.5
NELFCD-201ENST00000460601 PPP1R13BQ96KQ4 1090 aa18.16■□□□□ 0.5
NELFCD-201ENST00000460601 ACP6Q9NPH0 428 aa18.16■□□□□ 0.5
NELFCD-201ENST00000460601 AIPL1Q9NZN9 384 aa18.16■□□□□ 0.5
NELFCD-201ENST00000460601 REXO2Q9Y3B8 237 aaKnown RBP18.16■□□□□ 0.5
NELFCD-201ENST00000460601 ADGRG1Q9Y653 693 aa18.16■□□□□ 0.5
NELFCD-201ENST00000460601 MEIS3P2A8K0S8 358 aa18.16■□□□□ 0.5
NELFCD-201ENST00000460601 PHACTR2O75167 634 aa18.16■□□□□ 0.5
NELFCD-201ENST00000460601 TMEM191BP0C7N4 346 aa18.16■□□□□ 0.5
NELFCD-201ENST00000460601 CYP27A1Q02318 531 aa18.16■□□□□ 0.5
NELFCD-201ENST00000460601 DUOXA2Q1HG44 320 aa18.16■□□□□ 0.5
NELFCD-201ENST00000460601 FBXO47Q5MNV8 452 aa18.16■□□□□ 0.5
NELFCD-201ENST00000460601 ZNF333Q96JL9 665 aa18.16■□□□□ 0.5
NELFCD-201ENST00000460601 C16orf45Q96MC5 204 aaPredicted RBP18.16■□□□□ 0.5
NELFCD-201ENST00000460601 ZMAT2Q96NC0 199 aaKnown RBP18.16■□□□□ 0.5
NELFCD-201ENST00000460601 STK33Q9BYT3 514 aa18.16■□□□□ 0.5
NELFCD-201ENST00000460601 HAUS4Q9H6D7 363 aa18.16■□□□□ 0.5
NELFCD-201ENST00000460601 KLK14Q9P0G3 267 aa18.16■□□□□ 0.5
NELFCD-201ENST00000460601 EPN1Q9Y6I3 576 aaPredicted RBP18.16■□□□□ 0.5
NELFCD-201ENST00000460601 TRIP11Q15643 1979 aa18.15■□□□□ 0.5
NELFCD-201ENST00000460601 ZNF263O14978 683 aa18.15■□□□□ 0.5
NELFCD-201ENST00000460601 EVI5O60447 810 aa18.15■□□□□ 0.5
NELFCD-201ENST00000460601 RECQL4O94761 1208 aa18.15■□□□□ 0.5
NELFCD-201ENST00000460601 ABL1P00519 1130 aa18.15■□□□□ 0.5
NELFCD-201ENST00000460601 AXLP30530 894 aa18.15■□□□□ 0.5
NELFCD-201ENST00000460601 KCNJ6P48051 423 aa18.15■□□□□ 0.5
NELFCD-201ENST00000460601 MNX1P50219 401 aaPredicted RBP18.15■□□□□ 0.5
NELFCD-201ENST00000460601 PTPN11Q06124 597 aaPredicted RBP18.15■□□□□ 0.5
NELFCD-201ENST00000460601 LPIN1Q14693 890 aa18.15■□□□□ 0.5
NELFCD-201ENST00000460601 ASIC2Q16515 512 aa18.15■□□□□ 0.5
NELFCD-201ENST00000460601 SMG8Q8ND04 991 aaKnown RBP18.15■□□□□ 0.5
NELFCD-201ENST00000460601 NT5C1BQ96P26 610 aa18.15■□□□□ 0.5
NELFCD-201ENST00000460601 PADI3Q9ULW8 664 aa18.15■□□□□ 0.5
NELFCD-201ENST00000460601 IPPQ9Y573 584 aa18.15■□□□□ 0.5
NELFCD-201ENST00000460601 CITO14578 2027 aa18.15■□□□□ 0.5
NELFCD-201ENST00000460601 IBSPP21815 317 aaPredicted RBP18.14■□□□□ 0.5
NELFCD-201ENST00000460601 SOX5P35711 763 aa18.14■□□□□ 0.5
NELFCD-201ENST00000460601 MYL6P60660 151 aa18.14■□□□□ 0.5
NELFCD-201ENST00000460601 PTK2Q05397 1052 aa18.14■□□□□ 0.5
NELFCD-201ENST00000460601 GFPT1Q06210 699 aaPredicted RBP18.14■□□□□ 0.5
NELFCD-201ENST00000460601 KLHL30Q0D2K2 578 aa18.14■□□□□ 0.5
NELFCD-201ENST00000460601 HSP90AA2PQ14568 343 aaPredicted RBP18.14■□□□□ 0.5
NELFCD-201ENST00000460601 MBTPS1Q14703 1052 aa18.14■□□□□ 0.5
NELFCD-201ENST00000460601 C1orf127Q8N9H9 656 aa18.14■□□□□ 0.5
NELFCD-201ENST00000460601 DIS3LQ8TF46 1054 aaKnown RBP18.14■□□□□ 0.5
NELFCD-201ENST00000460601 U2AF1L4Q8WU68 220 aaKnown RBP18.14■□□□□ 0.5
NELFCD-201ENST00000460601 SYN2Q92777 582 aaPredicted RBP18.14■□□□□ 0.5
NELFCD-201ENST00000460601 CCDC42Q96M95 316 aa18.14■□□□□ 0.5
NELFCD-201ENST00000460601 CCDC94Q9BW85 323 aaPredicted RBP18.14■□□□□ 0.5
NELFCD-201ENST00000460601 NUB1Q9Y5A7 615 aa18.14■□□□□ 0.5
NELFCD-201ENST00000460601 LAMA2P24043 3122 aaKnown RBP18.14■□□□□ 0.49
NELFCD-201ENST00000460601 MGEA5O60502 916 aa18.14■□□□□ 0.49
NELFCD-201ENST00000460601 IL18RAPO95256 599 aa18.14■□□□□ 0.49
NELFCD-201ENST00000460601 KRT19P08727 400 aa18.14■□□□□ 0.49
NELFCD-201ENST00000460601 HSPA1AP0DMV8 641 aaKnown RBP18.14■□□□□ 0.49
NELFCD-201ENST00000460601 HSPA1BP0DMV9 641 aaKnown RBP18.14■□□□□ 0.49
NELFCD-201ENST00000460601 CLCN1P35523 988 aa18.14■□□□□ 0.49
NELFCD-201ENST00000460601 NOP14P78316 857 aaKnown RBP18.14■□□□□ 0.49
NELFCD-201ENST00000460601 CDK17Q00537 523 aa18.14■□□□□ 0.49
NELFCD-201ENST00000460601 TRAF7Q6Q0C0 670 aa18.14■□□□□ 0.49
NELFCD-201ENST00000460601 REXO1L1PQ8IX06 675 aa18.14■□□□□ 0.49
NELFCD-201ENST00000460601 FAM126BQ8IXS8 530 aa18.14■□□□□ 0.49
NELFCD-201ENST00000460601 ZNF710Q8N1W2 664 aa18.14■□□□□ 0.49
NELFCD-201ENST00000460601 NUCKS1Q9H1E3 243 aaKnown RBP18.14■□□□□ 0.49
NELFCD-201ENST00000460601 SIX4Q9UIU6 781 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms