RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 PLEKHH3Q7Z736 793 aa6.8□□□□□ -1.32
CCDC50-203ENST00000460064 SRLQ86TD4 932 aa6.8□□□□□ -1.32
CCDC50-203ENST00000460064 PLXDC1Q8IUK5 500 aa6.8□□□□□ -1.32
CCDC50-203ENST00000460064 FAM186BQ8IYM0 893 aa6.8□□□□□ -1.32
CCDC50-203ENST00000460064 DCBLD1Q8N8Z6 715 aa6.8□□□□□ -1.32
CCDC50-203ENST00000460064 IL31RAQ8NI17 732 aa6.8□□□□□ -1.32
CCDC50-203ENST00000460064 BRIX1Q8TDN6 353 aaKnown RBP6.8□□□□□ -1.32
CCDC50-203ENST00000460064 TNPO1Q92973 898 aaKnown RBP6.8□□□□□ -1.32
CCDC50-203ENST00000460064 NEIL1Q96FI4 390 aaPredicted RBP6.8□□□□□ -1.32
CCDC50-203ENST00000460064 APIPQ96GX9 242 aa6.8□□□□□ -1.32
CCDC50-203ENST00000460064 DPYSL5Q9BPU6 564 aa6.8□□□□□ -1.32
CCDC50-203ENST00000460064 MRI1Q9BV20 369 aa6.8□□□□□ -1.32
CCDC50-203ENST00000460064 MRPL46Q9H2W6 279 aaKnown RBP6.8□□□□□ -1.32
CCDC50-203ENST00000460064 AGO3Q9H9G7 860 aaKnown RBP6.8□□□□□ -1.32
CCDC50-203ENST00000460064 KIAA1586Q9HCI6 787 aa6.8□□□□□ -1.32
CCDC50-203ENST00000460064 NLRC4Q9NPP4 1024 aa6.8□□□□□ -1.32
CCDC50-203ENST00000460064 USP40Q9NVE5 1235 aa6.8□□□□□ -1.32
CCDC50-203ENST00000460064 GNL3LQ9NVN8 582 aaKnown RBP6.8□□□□□ -1.32
CCDC50-203ENST00000460064 DAAM1Q9Y4D1 1078 aa6.8□□□□□ -1.32
CCDC50-203ENST00000460064 NT5C1B-RDH14C9J2C7 533 aa6.79□□□□□ -1.32
CCDC50-203ENST00000460064 GRM6O15303 877 aa6.79□□□□□ -1.32
CCDC50-203ENST00000460064 CD1AP06126 327 aa6.79□□□□□ -1.32
CCDC50-203ENST00000460064 MTHFD1P11586 935 aaKnown RBP6.79□□□□□ -1.32
CCDC50-203ENST00000460064 SLC7A1P30825 629 aa6.79□□□□□ -1.32
CCDC50-203ENST00000460064 VPS72Q15906 364 aa6.79□□□□□ -1.32
CCDC50-203ENST00000460064 PABPC1LQ4VXU2 614 aaKnown RBP6.79□□□□□ -1.32
CCDC50-203ENST00000460064 GORABQ5T7V8 394 aa6.79□□□□□ -1.32
CCDC50-203ENST00000460064 OTUD7BQ6GQQ9 843 aa6.79□□□□□ -1.32
CCDC50-203ENST00000460064 FAM111BQ6SJ93 734 aa6.79□□□□□ -1.32
CCDC50-203ENST00000460064 PPP1R3BQ86XI6 285 aa6.79□□□□□ -1.32
CCDC50-203ENST00000460064 FAM90A1Q86YD7 464 aa6.79□□□□□ -1.32
CCDC50-203ENST00000460064 GPR135Q8IZ08 494 aa6.79□□□□□ -1.32
CCDC50-203ENST00000460064 KRT78Q8N1N4 520 aa6.79□□□□□ -1.32
CCDC50-203ENST00000460064 ACRBPQ8NEB7 543 aa6.79□□□□□ -1.32
CCDC50-203ENST00000460064 SLC35B2Q8TB61 432 aa6.79□□□□□ -1.32
CCDC50-203ENST00000460064 ANKS1AQ92625 1134 aa6.79□□□□□ -1.32
CCDC50-203ENST00000460064 PHKBQ93100 1093 aa6.79□□□□□ -1.32
CCDC50-203ENST00000460064 GJA10Q969M2 543 aa6.79□□□□□ -1.32
CCDC50-203ENST00000460064 LRRC37BQ96QE4 947 aa6.79□□□□□ -1.32
CCDC50-203ENST00000460064 LMF1Q96S06 567 aa6.79□□□□□ -1.32
CCDC50-203ENST00000460064 C1orf43Q9BWL3 253 aa6.79□□□□□ -1.32
CCDC50-203ENST00000460064 KCNH6Q9H252 994 aa6.79□□□□□ -1.32
CCDC50-203ENST00000460064 SLAMF7Q9NQ25 335 aa6.79□□□□□ -1.32
CCDC50-203ENST00000460064 SLC23A1Q9UHI7 598 aa6.79□□□□□ -1.32
CCDC50-203ENST00000460064 SNX13Q9Y5W8 968 aa6.79□□□□□ -1.32
CCDC50-203ENST00000460064 USP19O94966 1318 aa6.78□□□□□ -1.32
CCDC50-203ENST00000460064 TCRBV7S2A1N4TA0A589 114 aa6.78□□□□□ -1.32
CCDC50-203ENST00000460064 RHPN2P1A8MT19 583 aa6.78□□□□□ -1.32
CCDC50-203ENST00000460064 CXorf49A8MYA2 514 aaPredicted RBP6.78□□□□□ -1.32
CCDC50-203ENST00000460064 KIAA0391O15091 583 aaKnown RBP6.78□□□□□ -1.32
CCDC50-203ENST00000460064 STC2O76061 302 aa6.78□□□□□ -1.32
CCDC50-203ENST00000460064 AHSGP02765 367 aa6.78□□□□□ -1.32
CCDC50-203ENST00000460064 SBK3P0C264 359 aa6.78□□□□□ -1.32
CCDC50-203ENST00000460064 SERPINB3P29508 390 aa6.78□□□□□ -1.32
CCDC50-203ENST00000460064 PIK3CBP42338 1070 aa6.78□□□□□ -1.32
CCDC50-203ENST00000460064 HTR3AP46098 478 aa6.78□□□□□ -1.32
CCDC50-203ENST00000460064 ALDH5A1P51649 535 aaPredicted RBP6.78□□□□□ -1.32
CCDC50-203ENST00000460064 XYLT1Q86Y38 959 aa6.78□□□□□ -1.32
CCDC50-203ENST00000460064 EXOC8Q8IYI6 725 aa6.78□□□□□ -1.32
CCDC50-203ENST00000460064 IL17RDQ8NFM7 739 aa6.78□□□□□ -1.32
CCDC50-203ENST00000460064 CCDC138Q96M89 665 aa6.78□□□□□ -1.32
CCDC50-203ENST00000460064 SEC61A2Q9H9S3 476 aa6.78□□□□□ -1.32
CCDC50-203ENST00000460064 PIH1D1Q9NWS0 290 aaKnown RBP6.78□□□□□ -1.32
CCDC50-203ENST00000460064 SIDT1Q9NXL6 827 aaKnown RBP6.78□□□□□ -1.32
CCDC50-203ENST00000460064 TAGLN3Q9UI15 199 aa6.78□□□□□ -1.32
CCDC50-203ENST00000460064 OAZ3Q9UMX2 235 aa6.78□□□□□ -1.32
CCDC50-203ENST00000460064 HDAC5Q9UQL6 1122 aa6.78□□□□□ -1.32
CCDC50-203ENST00000460064 LOC102724159A0A0B4J2E5 919 aa6.77□□□□□ -1.33
CCDC50-203ENST00000460064 FRS3O43559 492 aa6.77□□□□□ -1.33
CCDC50-203ENST00000460064 SNRPA1P09661 255 aaKnown RBP6.77□□□□□ -1.33
CCDC50-203ENST00000460064 HDCP19113 662 aa6.77□□□□□ -1.33
CCDC50-203ENST00000460064 PHKA1P46020 1223 aa6.77□□□□□ -1.33
CCDC50-203ENST00000460064 PIK3CGP48736 1102 aa6.77□□□□□ -1.33
CCDC50-203ENST00000460064 PWP2Q15269 919 aaKnown RBP6.77□□□□□ -1.33
CCDC50-203ENST00000460064 SURF1Q15526 300 aa6.77□□□□□ -1.33
CCDC50-203ENST00000460064 FAM214AQ32MH5 1076 aa6.77□□□□□ -1.33
CCDC50-203ENST00000460064 DACT2Q5SW24 774 aa6.77□□□□□ -1.33
CCDC50-203ENST00000460064 C10orf62Q5T681 223 aaPredicted RBP6.77□□□□□ -1.33
CCDC50-203ENST00000460064 ANKS6Q68DC2 871 aa6.77□□□□□ -1.33
CCDC50-203ENST00000460064 ZNF529Q6P280 563 aa6.77□□□□□ -1.33
CCDC50-203ENST00000460064 SEM1Q6ZVN7 128 aa6.77□□□□□ -1.33
CCDC50-203ENST00000460064 UBE3BQ7Z3V4 1068 aa6.77□□□□□ -1.33
CCDC50-203ENST00000460064 TAX1BP1Q86VP1 789 aa6.77□□□□□ -1.33
CCDC50-203ENST00000460064 SKAP1Q86WV1 359 aa6.77□□□□□ -1.33
CCDC50-203ENST00000460064 CERS3Q8IU89 383 aa6.77□□□□□ -1.33
CCDC50-203ENST00000460064 SPICE1Q8N0Z3 855 aa6.77□□□□□ -1.33
CCDC50-203ENST00000460064 CELF5Q8N6W0 485 aaKnown RBP6.77□□□□□ -1.33
CCDC50-203ENST00000460064 TMEM176AQ96HP8 235 aa6.77□□□□□ -1.33
CCDC50-203ENST00000460064 ZNF512Q96ME7 567 aaPredicted RBP6.77□□□□□ -1.33
CCDC50-203ENST00000460064 ARPC5LQ9BPX5 153 aa6.77□□□□□ -1.33
CCDC50-203ENST00000460064 NELFAQ9H3P2 528 aa6.77□□□□□ -1.33
CCDC50-203ENST00000460064 ZNF287Q9HBT7 754 aa6.77□□□□□ -1.33
CCDC50-203ENST00000460064 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.77□□□□□ -1.33
CCDC50-203ENST00000460064 OGDHLQ9ULD0 1010 aa6.77□□□□□ -1.33
CCDC50-203ENST00000460064 TBKBP1A7MCY6 615 aa6.76□□□□□ -1.33
CCDC50-203ENST00000460064 GNAI3P08754 354 aa6.76□□□□□ -1.33
CCDC50-203ENST00000460064 BRAFP15056 766 aa6.76□□□□□ -1.33
CCDC50-203ENST00000460064 RPL17P18621 184 aaKnown RBP6.76□□□□□ -1.33
CCDC50-203ENST00000460064 KCNJ5P48544 419 aa6.76□□□□□ -1.33
CCDC50-203ENST00000460064 SUMO3P55854 103 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms