RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 PSMC2P35998 433 aaKnown RBP12.77□□□□□ -0.37
TRAPPC12-212ENST00000457845 STX17P56962 302 aa12.77□□□□□ -0.37
TRAPPC12-212ENST00000457845 ERVK-21P61565 698 aa12.77□□□□□ -0.37
TRAPPC12-212ENST00000457845 CLDN10P78369 228 aa12.77□□□□□ -0.37
TRAPPC12-212ENST00000457845 TYRO3Q06418 890 aa12.77□□□□□ -0.37
TRAPPC12-212ENST00000457845 TUSC3Q13454 348 aa12.77□□□□□ -0.37
TRAPPC12-212ENST00000457845 PSMD6Q15008 389 aa12.77□□□□□ -0.37
TRAPPC12-212ENST00000457845 HABP4Q5JVS0 413 aaKnown RBP12.77□□□□□ -0.37
TRAPPC12-212ENST00000457845 GLRA4Q5JXX5 417 aa12.77□□□□□ -0.37
TRAPPC12-212ENST00000457845 FILIP1Q7Z7B0 1213 aa12.77□□□□□ -0.37
TRAPPC12-212ENST00000457845 EFCAB13Q8IY85 973 aa12.77□□□□□ -0.37
TRAPPC12-212ENST00000457845 RDH13Q8NBN7 331 aa12.77□□□□□ -0.37
TRAPPC12-212ENST00000457845 PARD3BQ8TEW8 1205 aa12.77□□□□□ -0.37
TRAPPC12-212ENST00000457845 TIFAQ96CG3 184 aa12.77□□□□□ -0.37
TRAPPC12-212ENST00000457845 CEP63Q96MT8 703 aa12.77□□□□□ -0.37
TRAPPC12-212ENST00000457845 SAMD11Q96NU1 681 aa12.77□□□□□ -0.37
TRAPPC12-212ENST00000457845 NKX2-4Q9H2Z4 354 aa12.77□□□□□ -0.37
TRAPPC12-212ENST00000457845 PDE11AQ9HCR9 933 aa12.77□□□□□ -0.37
TRAPPC12-212ENST00000457845 SLC38A7Q9NVC3 462 aa12.77□□□□□ -0.37
TRAPPC12-212ENST00000457845 DNAJB4Q9UDY4 337 aa12.77□□□□□ -0.37
TRAPPC12-212ENST00000457845 UBQLN1Q9UMX0 589 aaKnown RBP12.77□□□□□ -0.37
TRAPPC12-212ENST00000457845 RWDD3Q9Y3V2 267 aa12.77□□□□□ -0.37
TRAPPC12-212ENST00000457845 CHD9Q3L8U1 2897 aa12.76□□□□□ -0.37
TRAPPC12-212ENST00000457845 SYCE3A1L190 88 aa12.76□□□□□ -0.37
TRAPPC12-212ENST00000457845 SLC16A3O15427 465 aaKnown RBP12.76□□□□□ -0.37
TRAPPC12-212ENST00000457845 RB1P06400 928 aa12.76□□□□□ -0.37
TRAPPC12-212ENST00000457845 GALTP07902 379 aa12.76□□□□□ -0.37
TRAPPC12-212ENST00000457845 LAG3P18627 525 aa12.76□□□□□ -0.37
TRAPPC12-212ENST00000457845 BMPR1AP36894 532 aa12.76□□□□□ -0.37
TRAPPC12-212ENST00000457845 RNASELQ05823 741 aaKnown RBP12.76□□□□□ -0.37
TRAPPC12-212ENST00000457845 SOX4Q06945 474 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC12-212ENST00000457845 ZSCAN23Q3MJ62 389 aa12.76□□□□□ -0.37
TRAPPC12-212ENST00000457845 SPATA1Q5VX52 437 aa12.76□□□□□ -0.37
TRAPPC12-212ENST00000457845 CEP135Q66GS9 1140 aa12.76□□□□□ -0.37
TRAPPC12-212ENST00000457845 JADE1Q6IE81 842 aa12.76□□□□□ -0.37
TRAPPC12-212ENST00000457845 GPR153Q6NV75 609 aa12.76□□□□□ -0.37
TRAPPC12-212ENST00000457845 KCNT2Q6UVM3 1135 aa12.76□□□□□ -0.37
TRAPPC12-212ENST00000457845 C11orf57Q6ZUT1 292 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC12-212ENST00000457845 COLGALT1Q8NBJ5 622 aa12.76□□□□□ -0.37
TRAPPC12-212ENST00000457845 ENOX1Q8TC92 643 aaKnown RBP12.76□□□□□ -0.37
TRAPPC12-212ENST00000457845 PLEKHO2Q8TD55 490 aa12.76□□□□□ -0.37
TRAPPC12-212ENST00000457845 TMC2Q8TDI7 906 aa12.76□□□□□ -0.37
TRAPPC12-212ENST00000457845 FAM193BQ96PV7 902 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC12-212ENST00000457845 TGS1Q96RS0 853 aaKnown RBP12.76□□□□□ -0.37
TRAPPC12-212ENST00000457845 PLVAPQ9BX97 442 aa12.76□□□□□ -0.37
TRAPPC12-212ENST00000457845 SLC28A3Q9HAS3 691 aa12.76□□□□□ -0.37
TRAPPC12-212ENST00000457845 FRMD4BQ9Y2L6 1034 aa12.76□□□□□ -0.37
TRAPPC12-212ENST00000457845 COL4A4P53420 1690 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC12-212ENST00000457845 XPOTO43592 962 aaKnown RBP12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 EFEMP2O95967 443 aa12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 ALDH2P05091 517 aa12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 NFICP08651 508 aa12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 CCDC192P0DO97 292 aa12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 LRPAP1P30533 357 aa12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 RPL9P32969 192 aaKnown RBP12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 SLC11A1P49279 550 aa12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 MARSP56192 900 aaKnown RBP12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 BCAR1P56945 870 aa12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 SPAG1Q07617 926 aa12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 TMEM132DQ14C87 1099 aa12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 C1orf220Q5T0J3 134 aa12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 PPP2R2DQ66LE6 453 aa12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 INTS8Q75QN2 995 aaKnown RBP12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 SPRED2Q7Z698 418 aa12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 WDR49Q8IV35 697 aa12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 FAM186BQ8IYM0 893 aa12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 SLC39A11Q8N1S5 342 aa12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 CSGALNACT2Q8N6G5 542 aa12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 CXorf38Q8TB03 319 aa12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 FAM212AQ96EL1 285 aa12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 KIF12Q96FN5 646 aa12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 UROC1Q96N76 676 aa12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 ZNF558Q96NG5 402 aa12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 C17orf80Q9BSJ5 609 aa12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 SRRTQ9BXP5 876 aaKnown RBP12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 AAASQ9NRG9 546 aa12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 INTS13Q9NVM9 706 aa12.75□□□□□ -0.37
TRAPPC12-212ENST00000457845 MYO7AQ13402 2215 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 PTPRJQ12913 1337 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 ANO9A1A5B4 782 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 TMEM189-UBE2V1I3L0A0 370 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 NRP1O14786 923 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 IKBKBO14920 756 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 ZC3H11AO75152 810 aaKnown RBP eCLIP12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 FGFR1OPO95684 399 aaKnown RBP12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 EPB41P11171 864 aaKnown RBP12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 ALDH7A1P49419 539 aaKnown RBP12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 PLCB3Q01970 1234 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 BFSP1Q12934 665 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 UPP1Q16831 310 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 EPC2Q52LR7 807 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 CD300LGQ6UXG3 332 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 FRMD5Q7Z6J6 570 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 IRF2BP1Q8IU81 584 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 NOC3LQ8WTT2 800 aaKnown RBP12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 CACTINQ8WUQ7 758 aaKnown RBP12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 ZNF516Q92618 1163 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 C18orf25Q96B23 403 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 EEF2KMTQ96G04 330 aa12.74□□□□□ -0.37
TRAPPC12-212ENST00000457845 DDX27Q96GQ7 796 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms