RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 VCANP13611 3396 aa10.96□□□□□ -0.66
ATG4A-206ENST00000457035 REV3LO60673 3130 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 LACTBL1A8MY62 500 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 NT5C1B-RDH14C9J2C7 533 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 ALDH2P05091 517 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 ITGB1P05556 798 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 THP07101 528 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 CXCL8P10145 99 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 KCNE1P15382 129 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 POU3F3P20264 500 aaPredicted RBP10.95□□□□□ -0.66
ATG4A-206ENST00000457035 BMP6P22004 513 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 PBX3P40426 434 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 SLC11A1P49279 550 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 ALDH7A1P49419 539 aaKnown RBP10.95□□□□□ -0.66
ATG4A-206ENST00000457035 YARSP54577 528 aaKnown RBP10.95□□□□□ -0.66
ATG4A-206ENST00000457035 POU5F1Q01860 360 aaKnown RBP10.95□□□□□ -0.66
ATG4A-206ENST00000457035 PLCB3Q01970 1234 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 GRIK3Q13003 919 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 GPM6BQ13491 265 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 CAMK1Q14012 370 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 ENOX2Q16206 610 aaKnown RBP10.95□□□□□ -0.66
ATG4A-206ENST00000457035 CAMK4Q16566 473 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 ZNF658Q5TYW1 1059 aaPredicted RBP10.95□□□□□ -0.66
ATG4A-206ENST00000457035 MICALL1Q8N3F8 863 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 GUF1Q8N442 669 aaKnown RBP10.95□□□□□ -0.66
ATG4A-206ENST00000457035 SPPL3Q8TCT6 385 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 GPT2Q8TD30 523 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 TMEM174Q8WUU8 243 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 SMARCE1Q969G3 411 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 SNX27Q96L92 541 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 ZNF558Q96NG5 402 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 FAM193BQ96PV7 902 aaPredicted RBP10.95□□□□□ -0.66
ATG4A-206ENST00000457035 RPS6KC1Q96S38 1066 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 TMEM175Q9BSA9 504 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 PCIF1Q9H4Z3 704 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 RPF1Q9H9Y2 349 aaKnown RBP10.95□□□□□ -0.66
ATG4A-206ENST00000457035 ALG13Q9NP73 1137 aaKnown RBP10.95□□□□□ -0.66
ATG4A-206ENST00000457035 AGPAT3Q9NRZ7 376 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 TOPORSQ9NS56 1045 aaPredicted RBP10.95□□□□□ -0.66
ATG4A-206ENST00000457035 RMND1Q9NWS8 449 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 CNTN3Q9P232 1028 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 KIAA1468Q9P260 1216 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 CGNQ9P2M7 1197 aaKnown RBP10.95□□□□□ -0.66
ATG4A-206ENST00000457035 MAN1B1Q9UKM7 699 aa10.95□□□□□ -0.66
ATG4A-206ENST00000457035 GOLGA6L22H0YM25 854 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 PDXKO00764 312 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 NRP1O14786 923 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 KIAA0391O15091 583 aaKnown RBP10.94□□□□□ -0.66
ATG4A-206ENST00000457035 CLIC2O15247 247 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 GRM6O15303 877 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 EXTL3O43909 919 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 ZC3H11AO75152 810 aaKnown RBP eCLIP10.94□□□□□ -0.66
ATG4A-206ENST00000457035 FGF18O76093 207 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 LDHAP00338 332 aaKnown RBP10.94□□□□□ -0.66
ATG4A-206ENST00000457035 DNAJB1P25685 340 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 PRCPP42785 496 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 SOX4Q06945 474 aaPredicted RBP10.94□□□□□ -0.66
ATG4A-206ENST00000457035 ZBTB6Q15916 424 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 COBLL1Q53SF7 1204 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 GLRA4Q5JXX5 417 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 ARMCX5Q6P1M9 558 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 TMEM173Q86WV6 379 aaPredicted RBP10.94□□□□□ -0.66
ATG4A-206ENST00000457035 C12orf56Q8IXR9 622 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 SMYD4Q8IYR2 804 aaPredicted RBP10.94□□□□□ -0.66
ATG4A-206ENST00000457035 SLC39A11Q8N1S5 342 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 GDPD5Q8WTR4 605 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 KHSRPQ92945 711 aaKnown RBP eCLIP10.94□□□□□ -0.66
ATG4A-206ENST00000457035 SAAL1Q96ER3 474 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 IGSF21Q96ID5 467 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 FBXL18Q96ME1 805 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 PAAF1Q9BRP4 392 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 C11orf84Q9BUA3 381 aaPredicted RBP10.94□□□□□ -0.66
ATG4A-206ENST00000457035 CLSTN2Q9H4D0 955 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 DMAC2Q9NW81 257 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 SPG21Q9NZD8 308 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 HSPBP1Q9NZL4 362 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 THEGQ9P2T0 379 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 MAPK8IP1Q9UQF2 711 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 FAN1Q9Y2M0 1017 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 PCDHGA4Q9Y5G9 962 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 VWA8A3KMH1 1905 aa10.94□□□□□ -0.66
ATG4A-206ENST00000457035 CARNS1A5YM72 827 aa10.93□□□□□ -0.66
ATG4A-206ENST00000457035 GOLGA8IPA6NC78 632 aa10.93□□□□□ -0.66
ATG4A-206ENST00000457035 GOLGA8JA6NMD2 632 aa10.93□□□□□ -0.66
ATG4A-206ENST00000457035 KIF20AO95235 890 aa10.93□□□□□ -0.66
ATG4A-206ENST00000457035 EFEMP2O95967 443 aa10.93□□□□□ -0.66
ATG4A-206ENST00000457035 MCM4P33991 863 aa10.93□□□□□ -0.66
ATG4A-206ENST00000457035 WNT7BP56706 349 aa10.93□□□□□ -0.66
ATG4A-206ENST00000457035 SPAG1Q07617 926 aa10.93□□□□□ -0.66
ATG4A-206ENST00000457035 TUSC3Q13454 348 aa10.93□□□□□ -0.66
ATG4A-206ENST00000457035 MORC3Q14149 939 aa10.93□□□□□ -0.66
ATG4A-206ENST00000457035 ISM2Q6H9L7 571 aa10.93□□□□□ -0.66
ATG4A-206ENST00000457035 CD300LGQ6UXG3 332 aa10.93□□□□□ -0.66
ATG4A-206ENST00000457035 HS2ST1Q7LGA3 356 aa10.93□□□□□ -0.66
ATG4A-206ENST00000457035 SLC9A9Q8IVB4 645 aa10.93□□□□□ -0.66
ATG4A-206ENST00000457035 CD302Q8IX05 232 aa10.93□□□□□ -0.66
ATG4A-206ENST00000457035 GPD1LQ8N335 351 aa10.93□□□□□ -0.66
ATG4A-206ENST00000457035 BCL7CQ8WUZ0 217 aaPredicted RBP10.93□□□□□ -0.66
ATG4A-206ENST00000457035 PTCD2Q8WV60 388 aaKnown RBP10.93□□□□□ -0.66
ATG4A-206ENST00000457035 POF1BQ8WVV4 589 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms