RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 RPL17P18621 184 aaKnown RBP17.71■□□□□ 0.43
CPSF6-203ENST00000456847 XKR4Q5GH76 650 aa17.71■□□□□ 0.43
CPSF6-203ENST00000456847 ATAT1Q5SQI0 421 aa17.71■□□□□ 0.43
CPSF6-203ENST00000456847 DCLRE1AQ6PJP8 1040 aa17.71■□□□□ 0.43
CPSF6-203ENST00000456847 ALKAL1Q6UXT8 129 aa17.71■□□□□ 0.43
CPSF6-203ENST00000456847 PALB2Q86YC2 1186 aa17.71■□□□□ 0.43
CPSF6-203ENST00000456847 POMKQ9H5K3 350 aa17.71■□□□□ 0.43
CPSF6-203ENST00000456847 MUTYHQ9UIF7 546 aa17.71■□□□□ 0.43
CPSF6-203ENST00000456847 NR2E1Q9Y466 385 aa17.71■□□□□ 0.43
CPSF6-203ENST00000456847 MTCL1Q9Y4B5 1905 aaKnown RBP17.71■□□□□ 0.43
CPSF6-203ENST00000456847 DENND4AQ7Z401 1863 aa17.71■□□□□ 0.43
CPSF6-203ENST00000456847 BDP1A6H8Y1 2624 aa17.71■□□□□ 0.43
CPSF6-203ENST00000456847 MYMKA6NI61 221 aa17.7■□□□□ 0.42
CPSF6-203ENST00000456847 TMEM189-UBE2V1I3L0A0 370 aa17.7■□□□□ 0.42
CPSF6-203ENST00000456847 CXCL8P10145 99 aa17.7■□□□□ 0.42
CPSF6-203ENST00000456847 KCNE1P15382 129 aa17.7■□□□□ 0.42
CPSF6-203ENST00000456847 SOX4Q06945 474 aaPredicted RBP17.7■□□□□ 0.42
CPSF6-203ENST00000456847 PSMD5Q16401 504 aa17.7■□□□□ 0.42
CPSF6-203ENST00000456847 TMEM31Q5JXX7 168 aa17.7■□□□□ 0.42
CPSF6-203ENST00000456847 GPR65Q8IYL9 337 aa17.7■□□□□ 0.42
CPSF6-203ENST00000456847 KCNN1Q92952 543 aa17.7■□□□□ 0.42
CPSF6-203ENST00000456847 DDX27Q96GQ7 796 aaKnown RBP17.7■□□□□ 0.42
CPSF6-203ENST00000456847 ZMAT2Q96NC0 199 aaKnown RBP17.7■□□□□ 0.42
CPSF6-203ENST00000456847 FNIP2Q9P278 1114 aa17.7■□□□□ 0.42
CPSF6-203ENST00000456847 A0A087X0B3 334 aa17.7■□□□□ 0.42
CPSF6-203ENST00000456847 PODXLO00592 558 aa17.7■□□□□ 0.42
CPSF6-203ENST00000456847 CUTAO60888 179 aa17.7■□□□□ 0.42
CPSF6-203ENST00000456847 PIGRP01833 764 aa17.7■□□□□ 0.42
CPSF6-203ENST00000456847 CLTAP09496 248 aa17.7■□□□□ 0.42
CPSF6-203ENST00000456847 IDEP14735 1019 aa17.7■□□□□ 0.42
CPSF6-203ENST00000456847 GAP43P17677 238 aa17.7■□□□□ 0.42
CPSF6-203ENST00000456847 KYAT1Q16773 422 aa17.7■□□□□ 0.42
CPSF6-203ENST00000456847 UPP1Q16831 310 aa17.7■□□□□ 0.42
CPSF6-203ENST00000456847 ZC2HC1CQ53FD0 456 aaPredicted RBP17.7■□□□□ 0.42
CPSF6-203ENST00000456847 PDXDC1Q6P996 788 aa17.7■□□□□ 0.42
CPSF6-203ENST00000456847 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.7■□□□□ 0.42
CPSF6-203ENST00000456847 MAP4K3Q8IVH8 894 aa17.7■□□□□ 0.42
CPSF6-203ENST00000456847 MSTO1Q9BUK6 570 aa17.7■□□□□ 0.42
CPSF6-203ENST00000456847 HAPLN2Q9GZV7 340 aa17.7■□□□□ 0.42
CPSF6-203ENST00000456847 TRAPPC3O43617 180 aa17.69■□□□□ 0.42
CPSF6-203ENST00000456847 SPATA31D3P0C874 917 aa17.69■□□□□ 0.42
CPSF6-203ENST00000456847 GTF2BQ00403 316 aa17.69■□□□□ 0.42
CPSF6-203ENST00000456847 PPP2R3AQ06190 1150 aa17.69■□□□□ 0.42
CPSF6-203ENST00000456847 PKP1Q13835 747 aa17.69■□□□□ 0.42
CPSF6-203ENST00000456847 SLC10A6Q3KNW5 377 aa17.69■□□□□ 0.42
CPSF6-203ENST00000456847 SPATA31D4Q6ZUB0 917 aa17.69■□□□□ 0.42
CPSF6-203ENST00000456847 PIK3R5Q8WYR1 880 aa17.69■□□□□ 0.42
CPSF6-203ENST00000456847 C18orf25Q96B23 403 aaPredicted RBP17.69■□□□□ 0.42
CPSF6-203ENST00000456847 FIZ1Q96SL8 496 aa17.69■□□□□ 0.42
CPSF6-203ENST00000456847 MRPL44Q9H9J2 332 aaKnown RBP17.69■□□□□ 0.42
CPSF6-203ENST00000456847 SEL1LQ9UBV2 794 aa17.69■□□□□ 0.42
CPSF6-203ENST00000456847 OGTO15294 1046 aa17.68■□□□□ 0.42
CPSF6-203ENST00000456847 TNFSF9P41273 254 aa17.68■□□□□ 0.42
CPSF6-203ENST00000456847 GPR149Q86SP6 731 aa17.68■□□□□ 0.42
CPSF6-203ENST00000456847 KCNG4Q8TDN1 519 aa17.68■□□□□ 0.42
CPSF6-203ENST00000456847 HVCN1Q96D96 273 aa17.68■□□□□ 0.42
CPSF6-203ENST00000456847 RPF1Q9H9Y2 349 aaKnown RBP17.68■□□□□ 0.42
CPSF6-203ENST00000456847 TBC1D7Q9P0N9 293 aa17.68■□□□□ 0.42
CPSF6-203ENST00000456847 NUB1Q9Y5A7 615 aa17.68■□□□□ 0.42
CPSF6-203ENST00000456847 I3L4J1 428 aa17.68■□□□□ 0.42
CPSF6-203ENST00000456847 TGM5O43548 720 aa17.68■□□□□ 0.42
CPSF6-203ENST00000456847 BRCC3P46736 316 aa17.68■□□□□ 0.42
CPSF6-203ENST00000456847 TDRD5Q8NAT2 981 aaKnown RBP17.68■□□□□ 0.42
CPSF6-203ENST00000456847 C3orf58Q8NDZ4 430 aa17.68■□□□□ 0.42
CPSF6-203ENST00000456847 DHX58Q96C10 678 aa17.68■□□□□ 0.42
CPSF6-203ENST00000456847 DNAJC19Q96DA6 116 aa17.68■□□□□ 0.42
CPSF6-203ENST00000456847 FAM212AQ96EL1 285 aa17.68■□□□□ 0.42
CPSF6-203ENST00000456847 KIF12Q96FN5 646 aa17.68■□□□□ 0.42
CPSF6-203ENST00000456847 PLEKHA5Q9HAU0 1116 aa17.68■□□□□ 0.42
CPSF6-203ENST00000456847 MEFVO15553 781 aaPredicted RBP17.67■□□□□ 0.42
CPSF6-203ENST00000456847 GCNT3O95395 438 aa17.67■□□□□ 0.42
CPSF6-203ENST00000456847 TKTP29401 623 aaKnown RBP17.67■□□□□ 0.42
CPSF6-203ENST00000456847 ME1P48163 572 aa17.67■□□□□ 0.42
CPSF6-203ENST00000456847 SPAG1Q07617 926 aa17.67■□□□□ 0.42
CPSF6-203ENST00000456847 HERC4Q5GLZ8 1057 aaPredicted RBP17.67■□□□□ 0.42
CPSF6-203ENST00000456847 SLC39A4Q6P5W5 647 aa17.67■□□□□ 0.42
CPSF6-203ENST00000456847 CCDC149Q6ZUS6 474 aa17.67■□□□□ 0.42
CPSF6-203ENST00000456847 LNX1Q8TBB1 728 aaPredicted RBP17.67■□□□□ 0.42
CPSF6-203ENST00000456847 ST6GALNAC4Q9H4F1 302 aa17.67■□□□□ 0.42
CPSF6-203ENST00000456847 PLEKHA4Q9H4M7 779 aa17.67■□□□□ 0.42
CPSF6-203ENST00000456847 TUBGCP4Q9UGJ1 667 aa17.67■□□□□ 0.42
CPSF6-203ENST00000456847 CFAP45Q9UL16 551 aa17.67■□□□□ 0.42
CPSF6-203ENST00000456847 CCDC195A0A1B0GUA6 201 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 FGFR3P22607 806 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 IGFBP6P24592 240 aaPredicted RBP17.66■□□□□ 0.42
CPSF6-203ENST00000456847 RPL9P32969 192 aaKnown RBP17.66■□□□□ 0.42
CPSF6-203ENST00000456847 MCM4P33991 863 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 ZBTB41Q5SVQ8 909 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 ATL3Q6DD88 541 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 C15orf39Q6ZRI6 1047 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 ZNF720Q7Z2F6 126 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 KREMEN2Q8NCW0 462 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 FEZF2Q8TBJ5 459 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 HDAC7Q8WUI4 952 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 STAMQ92783 540 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 LRFN3Q9BTN0 628 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 LRRC27Q9C0I9 530 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 PIDD1Q9HB75 910 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 PANK4Q9NVE7 773 aa17.66■□□□□ 0.42
CPSF6-203ENST00000456847 EXOC7Q9UPT5 735 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms