RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 ATG4AQ8WYN0 398 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 C9orf72Q96LT7 481 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 CFAP57Q96MR6 1250 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 DCLK3Q9C098 648 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 DENND2DQ9H6A0 471 aaPredicted RBP14.6□□□□□ -0.07
PTPRE-204ENST00000455661 DLGAP2Q9P1A6 1054 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 SCOCQ9UIL1 159 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 ZFP69BQ9UJL9 534 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 SBF2Q86WG5 1849 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 EXOC1LA0A1B0GW35 172 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 EML1O00423 815 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 PRPF4O43172 522 aaKnown RBP eCLIP14.59□□□□□ -0.07
PTPRE-204ENST00000455661 TOM1O60784 492 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 ENTPD5O75356 428 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 ABHD2P08910 425 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 SP100P23497 879 aaPredicted RBP14.59□□□□□ -0.07
PTPRE-204ENST00000455661 SLC18A1P54219 525 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 PDK4Q16654 411 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 NBPF20Q3BBV1 942 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 NOP9Q86U38 636 aaKnown RBP14.59□□□□□ -0.07
PTPRE-204ENST00000455661 TRABD2AQ86V40 505 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 CCDC89Q8N998 374 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 LINC00116Q8NCU8 138 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 SUPT20HQ8NEM7 779 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 EPS8L1Q8TE68 723 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 MAML1Q92585 1016 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 PWWP2AQ96N64 755 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 SMC6Q96SB8 1091 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 SAR1AQ9NR31 198 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 NOCTQ9UK39 431 aaKnown RBP14.59□□□□□ -0.07
PTPRE-204ENST00000455661 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.59□□□□□ -0.07
PTPRE-204ENST00000455661 CBX6O95503 412 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 SKIP12755 728 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 CIITAP33076 1130 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 TUBP50607 506 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 VAMP7P51809 220 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 CENPCQ03188 943 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 RASA3Q14644 834 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 TAF1BQ53T94 588 aaPredicted RBP14.59□□□□□ -0.07
PTPRE-204ENST00000455661 SLC45A4Q5BKX6 768 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 FYB2Q5VWT5 728 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 NSMFQ6X4W1 530 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 KIAA0825Q8IV33 1275 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 C10orf82Q8WW14 230 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 ZNF333Q96JL9 665 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 FOXP3Q9BZS1 431 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 TRABDQ9H4I3 376 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 SLCO1B3Q9NPD5 702 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 EURLQ9NYK6 297 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 SENP1Q9P0U3 644 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 NARFQ9UHQ1 456 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 LNPEPQ9UIQ6 1025 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 KCNG1Q9UIX4 513 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 C2CD2Q9Y426 696 aa14.59□□□□□ -0.07
PTPRE-204ENST00000455661 KRT15P19012 456 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 MUTP22033 750 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 MAGEA4P43358 317 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 DLG4P78352 724 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 CDR2Q01850 454 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 NFIXQ14938 502 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 TMEM63BQ5T3F8 832 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 HHATQ5VTY9 493 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 IZUMO3Q5VZ72 239 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 CCDC125Q86Z20 511 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 FAM71AQ8IYT1 594 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 DENND1AQ8TEH3 1009 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 DYDC2Q96IM9 177 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 FIZ1Q96SL8 496 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 HSD17B14Q9BPX1 270 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 TUBB6Q9BUF5 446 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 AMNQ9BXJ7 453 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 TLE6Q9H808 572 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 LRRC4BQ9NT99 713 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.58□□□□□ -0.08
PTPRE-204ENST00000455661 LRCH1Q9Y2L9 728 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 MROH7Q68CQ1 1323 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 XIRP1Q702N8 1843 aaKnown RBP14.58□□□□□ -0.08
PTPRE-204ENST00000455661 CYP26A1O43174 497 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 ECE2O60344 883 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 GSTA2P09210 222 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 IL1R1P14778 569 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 RXRBP28702 533 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 MAPK4P31152 587 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 GCLMP48507 274 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 EPC2Q52LR7 807 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 RBM26Q5T8P6 1007 aaKnown RBP14.58□□□□□ -0.08
PTPRE-204ENST00000455661 CYP4F22Q6NT55 531 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 SPOCK2Q92563 424 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 NMRK1Q9NWW6 199 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 WDR35Q9P2L0 1181 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 BCS1LQ9Y276 419 aa14.58□□□□□ -0.08
PTPRE-204ENST00000455661 SPATA31A5Q5VU36 1347 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 SPATA31A6Q5VVP1 1343 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 SPATA31A7Q8IWB4 1347 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 COL14A1Q05707 1796 aaKnown RBP14.57□□□□□ -0.08
PTPRE-204ENST00000455661 SLITRK3O94933 977 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 RTN3O95197 1032 aaPredicted RBP14.57□□□□□ -0.08
PTPRE-204ENST00000455661 RRM1P23921 792 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 RFC5P40937 340 aa14.57□□□□□ -0.08
PTPRE-204ENST00000455661 RPS6KA3P51812 740 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms