RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 FOLR3P41439 243 aa3.23□□□□□ -1.89
LINC02540-201ENST00000455554 EXOSC10Q01780 885 aaKnown RBP3.23□□□□□ -1.89
LINC02540-201ENST00000455554 SQSTM1Q13501 440 aa3.23□□□□□ -1.89
LINC02540-201ENST00000455554 MST1LQ2TV78 715 aa3.23□□□□□ -1.89
LINC02540-201ENST00000455554 MTX3Q5HYI7 312 aa3.23□□□□□ -1.89
LINC02540-201ENST00000455554 C11orf87Q6NUJ2 197 aa3.23□□□□□ -1.89
LINC02540-201ENST00000455554 FRMD7Q6ZUT3 714 aa3.23□□□□□ -1.89
LINC02540-201ENST00000455554 FCRL4Q96PJ5 515 aa3.23□□□□□ -1.89
LINC02540-201ENST00000455554 KANSL2Q9H9L4 492 aa3.23□□□□□ -1.89
LINC02540-201ENST00000455554 FLRT1Q9NZU1 646 aa3.23□□□□□ -1.89
LINC02540-201ENST00000455554 KCNG1Q9UIX4 513 aa3.23□□□□□ -1.89
LINC02540-201ENST00000455554 ATRNL1Q5VV63 1379 aa3.23□□□□□ -1.89
LINC02540-201ENST00000455554 TRGV11A0A075B6L2 103 aa3.22□□□□□ -1.89
LINC02540-201ENST00000455554 TP73O15350 636 aa3.22□□□□□ -1.89
LINC02540-201ENST00000455554 ERN1O75460 977 aaKnown RBP3.22□□□□□ -1.89
LINC02540-201ENST00000455554 RFPL3O75679 317 aa3.22□□□□□ -1.89
LINC02540-201ENST00000455554 POMCP01189 267 aa3.22□□□□□ -1.89
LINC02540-201ENST00000455554 ALOX15P16050 662 aaPredicted RBP3.22□□□□□ -1.89
LINC02540-201ENST00000455554 NEK4P51957 841 aa3.22□□□□□ -1.89
LINC02540-201ENST00000455554 SOX10P56693 466 aa3.22□□□□□ -1.89
LINC02540-201ENST00000455554 SSBP2P81877 361 aaPredicted RBP3.22□□□□□ -1.89
LINC02540-201ENST00000455554 EIF2B5Q13144 721 aaKnown RBP3.22□□□□□ -1.89
LINC02540-201ENST00000455554 SP140Q13342 867 aa3.22□□□□□ -1.89
LINC02540-201ENST00000455554 TERF2Q15554 542 aa3.22□□□□□ -1.89
LINC02540-201ENST00000455554 TSTD2Q5T7W7 516 aa3.22□□□□□ -1.89
LINC02540-201ENST00000455554 KIAA0895LQ68EN5 471 aa3.22□□□□□ -1.89
LINC02540-201ENST00000455554 FCRLBQ6BAA4 426 aa3.22□□□□□ -1.89
LINC02540-201ENST00000455554 CRELD2Q6UXH1 353 aaPredicted RBP3.22□□□□□ -1.89
LINC02540-201ENST00000455554 PMFBP1Q8TBY8 1022 aa3.22□□□□□ -1.89
LINC02540-201ENST00000455554 MRI1Q9BV20 369 aa3.22□□□□□ -1.89
LINC02540-201ENST00000455554 KCTD10Q9H3F6 313 aa3.22□□□□□ -1.89
LINC02540-201ENST00000455554 SIK3Q9Y2K2 1263 aa3.22□□□□□ -1.89
LINC02540-201ENST00000455554 WNT6Q9Y6F9 365 aa3.22□□□□□ -1.89
LINC02540-201ENST00000455554 FAM83GA6ND36 823 aa3.21□□□□□ -1.9
LINC02540-201ENST00000455554 YY2O15391 372 aa3.21□□□□□ -1.9
LINC02540-201ENST00000455554 KDM1AO60341 852 aa3.21□□□□□ -1.9
LINC02540-201ENST00000455554 CBSLP0DN79 551 aa3.21□□□□□ -1.9
LINC02540-201ENST00000455554 ATP5JP18859 108 aa3.21□□□□□ -1.9
LINC02540-201ENST00000455554 SLC6A2P23975 617 aa3.21□□□□□ -1.9
LINC02540-201ENST00000455554 CBSP35520 551 aa3.21□□□□□ -1.9
LINC02540-201ENST00000455554 GRIA3P42263 894 aa3.21□□□□□ -1.9
LINC02540-201ENST00000455554 MAPK10P53779 464 aa3.21□□□□□ -1.9
LINC02540-201ENST00000455554 LGALS4P56470 323 aa3.21□□□□□ -1.9
LINC02540-201ENST00000455554 OCRLQ01968 901 aa3.21□□□□□ -1.9
LINC02540-201ENST00000455554 PABPC4Q13310 644 aaKnown RBP eCLIP3.21□□□□□ -1.9
LINC02540-201ENST00000455554 UBXN2BQ14CS0 331 aa3.21□□□□□ -1.9
LINC02540-201ENST00000455554 LLGL1Q15334 1064 aa3.21□□□□□ -1.9
LINC02540-201ENST00000455554 SF3B3Q15393 1217 aaKnown RBP3.21□□□□□ -1.9
LINC02540-201ENST00000455554 GEN1Q17RS7 908 aa3.21□□□□□ -1.9
LINC02540-201ENST00000455554 KLHL22Q53GT1 634 aa3.21□□□□□ -1.9
LINC02540-201ENST00000455554 PITRM1Q5JRX3 1037 aa3.21□□□□□ -1.9
LINC02540-201ENST00000455554 AFMIDQ63HM1 303 aa3.21□□□□□ -1.9
LINC02540-201ENST00000455554 KAZNQ674X7 775 aa3.21□□□□□ -1.9
LINC02540-201ENST00000455554 PEG10Q86TG7 708 aaKnown RBP3.21□□□□□ -1.9
LINC02540-201ENST00000455554 VGLL2Q8N8G2 317 aa3.21□□□□□ -1.9
LINC02540-201ENST00000455554 SMC1BQ8NDV3 1235 aa3.21□□□□□ -1.9
LINC02540-201ENST00000455554 FBXO18Q8NFZ0 1043 aa3.21□□□□□ -1.9
LINC02540-201ENST00000455554 OR7D4Q8NG98 312 aa3.21□□□□□ -1.9
LINC02540-201ENST00000455554 BCO1Q9HAY6 547 aa3.21□□□□□ -1.9
LINC02540-201ENST00000455554 MOCS1Q9NZB8 636 aa3.21□□□□□ -1.9
LINC02540-201ENST00000455554 FAM30AQ9NZY2 134 aa3.21□□□□□ -1.9
LINC02540-201ENST00000455554 KAT6AQ92794 2004 aa3.2□□□□□ -1.9
LINC02540-201ENST00000455554 AOX1Q06278 1338 aa3.2□□□□□ -1.9
LINC02540-201ENST00000455554 MPPED1O15442 326 aa3.2□□□□□ -1.9
LINC02540-201ENST00000455554 AKR1B10O60218 316 aa3.2□□□□□ -1.9
LINC02540-201ENST00000455554 RAB11FIP3O75154 756 aa3.2□□□□□ -1.9
LINC02540-201ENST00000455554 PRSS23O95084 383 aa3.2□□□□□ -1.9
LINC02540-201ENST00000455554 LPLP06858 475 aa3.2□□□□□ -1.9
LINC02540-201ENST00000455554 PRR35P0CG20 571 aa3.2□□□□□ -1.9
LINC02540-201ENST00000455554 RAP2AP10114 183 aa3.2□□□□□ -1.9
LINC02540-201ENST00000455554 ADSLP30566 484 aaPredicted RBP3.2□□□□□ -1.9
LINC02540-201ENST00000455554 SLC10A2Q12908 348 aaPredicted RBP3.2□□□□□ -1.9
LINC02540-201ENST00000455554 NBPF8Q3BBV2 869 aa3.2□□□□□ -1.9
LINC02540-201ENST00000455554 SOGA3Q5TF21 947 aa3.2□□□□□ -1.9
LINC02540-201ENST00000455554 ZNF626Q68DY1 528 aa3.2□□□□□ -1.9
LINC02540-201ENST00000455554 AMIGO2Q86SJ2 522 aa3.2□□□□□ -1.9
LINC02540-201ENST00000455554 ZNF48Q96MX3 618 aaPredicted RBP3.2□□□□□ -1.9
LINC02540-201ENST00000455554 C8orf37Q96NL8 207 aa3.2□□□□□ -1.9
LINC02540-201ENST00000455554 GPR101Q96P66 508 aaPredicted RBP3.2□□□□□ -1.9
LINC02540-201ENST00000455554 SPTLC3Q9NUV7 552 aa3.2□□□□□ -1.9
LINC02540-201ENST00000455554 SHROOM4Q9ULL8 1493 aa3.2□□□□□ -1.9
LINC02540-201ENST00000455554 CNTNAP2Q9UHC6 1331 aa3.19□□□□□ -1.9
LINC02540-201ENST00000455554 LINC01548A6NM66 108 aa3.19□□□□□ -1.9
LINC02540-201ENST00000455554 ELFN1P0C7U0 828 aa3.19□□□□□ -1.9
LINC02540-201ENST00000455554 SRGNP10124 158 aa3.19□□□□□ -1.9
LINC02540-201ENST00000455554 CKBP12277 381 aa3.19□□□□□ -1.9
LINC02540-201ENST00000455554 IL2RBP14784 551 aa3.19□□□□□ -1.9
LINC02540-201ENST00000455554 POU3F2P20265 443 aaPredicted RBP3.19□□□□□ -1.9
LINC02540-201ENST00000455554 ECHS1P30084 290 aa3.19□□□□□ -1.9
LINC02540-201ENST00000455554 SCNN1BP51168 640 aa3.19□□□□□ -1.9
LINC02540-201ENST00000455554 TUBA4AP68366 448 aa3.19□□□□□ -1.9
LINC02540-201ENST00000455554 GRM1Q13255 1194 aa3.19□□□□□ -1.9
LINC02540-201ENST00000455554 FHL1Q13642 323 aa3.19□□□□□ -1.9
LINC02540-201ENST00000455554 SART3Q15020 963 aaKnown RBP3.19□□□□□ -1.9
LINC02540-201ENST00000455554 ZNF529Q6P280 563 aa3.19□□□□□ -1.9
LINC02540-201ENST00000455554 VWA1Q6PCB0 445 aa3.19□□□□□ -1.9
LINC02540-201ENST00000455554 Q6ZVL8 140 aa3.19□□□□□ -1.9
LINC02540-201ENST00000455554 GPR156Q8NFN8 814 aa3.19□□□□□ -1.9
LINC02540-201ENST00000455554 SPATA3Q8NHX4 192 aa3.19□□□□□ -1.9
LINC02540-201ENST00000455554 RIN2Q8WYP3 895 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms