RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 TLR9Q9NR96 1032 aa30.43■■■□□ 2.46
SMARCC1-203ENST00000454240 HSPBP1Q9NZL4 362 aa30.43■■■□□ 2.46
SMARCC1-203ENST00000454240 GOLGA8IPA6NC78 632 aa30.42■■■□□ 2.46
SMARCC1-203ENST00000454240 GOLGA8JA6NMD2 632 aa30.42■■■□□ 2.46
SMARCC1-203ENST00000454240 F8W810 466 aa30.42■■■□□ 2.46
SMARCC1-203ENST00000454240 GOLGA6L22H0YM25 854 aa30.42■■■□□ 2.46
SMARCC1-203ENST00000454240 CLIC2O15247 247 aa30.42■■■□□ 2.46
SMARCC1-203ENST00000454240 EFEMP2O95967 443 aa30.42■■■□□ 2.46
SMARCC1-203ENST00000454240 ERVFC1P60507 584 aa30.42■■■□□ 2.46
SMARCC1-203ENST00000454240 SPAG1Q07617 926 aa30.42■■■□□ 2.46
SMARCC1-203ENST00000454240 HSP90AA2PQ14568 343 aaPredicted RBP30.42■■■□□ 2.46
SMARCC1-203ENST00000454240 GOLGA5Q8TBA6 731 aa30.42■■■□□ 2.46
SMARCC1-203ENST00000454240 TMEM174Q8WUU8 243 aa30.42■■■□□ 2.46
SMARCC1-203ENST00000454240 RABGGTAQ92696 567 aa30.42■■■□□ 2.46
SMARCC1-203ENST00000454240 C18orf25Q96B23 403 aaPredicted RBP30.42■■■□□ 2.46
SMARCC1-203ENST00000454240 FAM212AQ96EL1 285 aa30.42■■■□□ 2.46
SMARCC1-203ENST00000454240 FBXL18Q96ME1 805 aa30.42■■■□□ 2.46
SMARCC1-203ENST00000454240 UROC1Q96N76 676 aa30.42■■■□□ 2.46
SMARCC1-203ENST00000454240 MAPK8IP1Q9UQF2 711 aa30.42■■■□□ 2.46
SMARCC1-203ENST00000454240 COL6A3P12111 3177 aa30.42■■■□□ 2.46
SMARCC1-203ENST00000454240 PDXKO00764 312 aa30.41■■■□□ 2.46
SMARCC1-203ENST00000454240 IRS1P35568 1242 aa30.41■■■□□ 2.46
SMARCC1-203ENST00000454240 COBLL1Q53SF7 1204 aa30.41■■■□□ 2.46
SMARCC1-203ENST00000454240 BRSK2Q8IWQ3 736 aa30.41■■■□□ 2.46
SMARCC1-203ENST00000454240 KIF12Q96FN5 646 aa30.41■■■□□ 2.46
SMARCC1-203ENST00000454240 VN1R3Q9BXE9 311 aa30.41■■■□□ 2.46
SMARCC1-203ENST00000454240 GOLGA2P5Q9HBQ8 144 aa30.41■■■□□ 2.46
SMARCC1-203ENST00000454240 FSCN2O14926 492 aa30.4■■■□□ 2.46
SMARCC1-203ENST00000454240 CLCNKBP51801 687 aa30.4■■■□□ 2.46
SMARCC1-203ENST00000454240 UPP1Q16831 310 aa30.4■■■□□ 2.46
SMARCC1-203ENST00000454240 PDE12Q6L8Q7 609 aaKnown RBP30.4■■■□□ 2.46
SMARCC1-203ENST00000454240 SMYD4Q8IYR2 804 aaPredicted RBP30.4■■■□□ 2.46
SMARCC1-203ENST00000454240 GTPBP4Q9BZE4 634 aaKnown RBP30.4■■■□□ 2.46
SMARCC1-203ENST00000454240 KIAA1586Q9HCI6 787 aa30.4■■■□□ 2.46
SMARCC1-203ENST00000454240 STK39Q9UEW8 545 aa30.4■■■□□ 2.46
SMARCC1-203ENST00000454240 MAN1B1Q9UKM7 699 aa30.4■■■□□ 2.46
SMARCC1-203ENST00000454240 DERAQ9Y315 318 aa30.4■■■□□ 2.46
SMARCC1-203ENST00000454240 IL18RAPO95256 599 aa30.39■■■□□ 2.46
SMARCC1-203ENST00000454240 TIGD5Q53EQ6 642 aa30.39■■■□□ 2.46
SMARCC1-203ENST00000454240 JADE1Q6IE81 842 aa30.39■■■□□ 2.46
SMARCC1-203ENST00000454240 RNF168Q8IYW5 571 aaPredicted RBP30.39■■■□□ 2.46
SMARCC1-203ENST00000454240 MAFAQ8NHW3 353 aaPredicted RBP30.39■■■□□ 2.46
SMARCC1-203ENST00000454240 DDX27Q96GQ7 796 aaKnown RBP30.39■■■□□ 2.46
SMARCC1-203ENST00000454240 DMAC2Q9NW81 257 aa30.39■■■□□ 2.46
SMARCC1-203ENST00000454240 RBAKQ9NYW8 714 aaPredicted RBP30.39■■■□□ 2.46
SMARCC1-203ENST00000454240 ADAM28Q9UKQ2 775 aa30.39■■■□□ 2.46
SMARCC1-203ENST00000454240 UBQLN1Q9UMX0 589 aaKnown RBP30.39■■■□□ 2.46
SMARCC1-203ENST00000454240 TRAF3IP3Q9Y228 551 aa30.39■■■□□ 2.46
SMARCC1-203ENST00000454240 GTF3C5Q9Y5Q8 519 aaPredicted RBP30.39■■■□□ 2.46
SMARCC1-203ENST00000454240 TMEM189-UBE2V1I3L0A0 370 aa30.38■■■□□ 2.45
SMARCC1-203ENST00000454240 KIF4AO95239 1232 aa30.38■■■□□ 2.45
SMARCC1-203ENST00000454240 CYP3A5P20815 502 aa30.38■■■□□ 2.45
SMARCC1-203ENST00000454240 RPL9P32969 192 aaKnown RBP30.38■■■□□ 2.45
SMARCC1-203ENST00000454240 PRCPP42785 496 aa30.38■■■□□ 2.45
SMARCC1-203ENST00000454240 CAMK4Q16566 473 aa30.38■■■□□ 2.45
SMARCC1-203ENST00000454240 DCLRE1AQ6PJP8 1040 aa30.38■■■□□ 2.45
SMARCC1-203ENST00000454240 CBWD2Q8IUF1 395 aa30.38■■■□□ 2.45
SMARCC1-203ENST00000454240 SLC9A9Q8IVB4 645 aa30.38■■■□□ 2.45
SMARCC1-203ENST00000454240 VPS52Q8N1B4 723 aa30.38■■■□□ 2.45
SMARCC1-203ENST00000454240 XXYLT1Q8NBI6 393 aa30.38■■■□□ 2.45
SMARCC1-203ENST00000454240 TCF25Q9BQ70 676 aa30.38■■■□□ 2.45
SMARCC1-203ENST00000454240 NSUN3Q9H649 340 aaKnown RBP30.38■■■□□ 2.45
SMARCC1-203ENST00000454240 TUBGCP4Q9UGJ1 667 aa30.38■■■□□ 2.45
SMARCC1-203ENST00000454240 C2CD2Q9Y426 696 aa30.38■■■□□ 2.45
SMARCC1-203ENST00000454240 ZNF233A6NK53 670 aa30.37■■■□□ 2.45
SMARCC1-203ENST00000454240 XPOTO43592 962 aaKnown RBP30.37■■■□□ 2.45
SMARCC1-203ENST00000454240 TADA2AO75478 443 aa30.37■■■□□ 2.45
SMARCC1-203ENST00000454240 CSPG5O95196 566 aa30.37■■■□□ 2.45
SMARCC1-203ENST00000454240 NFICP08651 508 aa30.37■■■□□ 2.45
SMARCC1-203ENST00000454240 CYP2J2P51589 502 aa30.37■■■□□ 2.45
SMARCC1-203ENST00000454240 WNT7BP56706 349 aa30.37■■■□□ 2.45
SMARCC1-203ENST00000454240 SPATA1Q5VX52 437 aa30.37■■■□□ 2.45
SMARCC1-203ENST00000454240 CD300LGQ6UXG3 332 aa30.37■■■□□ 2.45
SMARCC1-203ENST00000454240 MICALL1Q8N3F8 863 aa30.37■■■□□ 2.45
SMARCC1-203ENST00000454240 NOC3LQ8WTT2 800 aaKnown RBP30.37■■■□□ 2.45
SMARCC1-203ENST00000454240 ZBP1Q9H171 429 aa30.37■■■□□ 2.45
SMARCC1-203ENST00000454240 CLSTN2Q9H4D0 955 aa30.37■■■□□ 2.45
SMARCC1-203ENST00000454240 NGRNQ9NPE2 291 aaKnown RBP30.37■■■□□ 2.45
SMARCC1-203ENST00000454240 KIAA1468Q9P260 1216 aa30.37■■■□□ 2.45
SMARCC1-203ENST00000454240 PCDHGC5Q9Y5F6 944 aa30.37■■■□□ 2.45
SMARCC1-203ENST00000454240 IGFBP6P24592 240 aaPredicted RBP30.36■■■□□ 2.45
SMARCC1-203ENST00000454240 LRPAP1P30533 357 aa30.36■■■□□ 2.45
SMARCC1-203ENST00000454240 TMEM132DQ14C87 1099 aa30.36■■■□□ 2.45
SMARCC1-203ENST00000454240 CCDC85BQ15834 202 aaPredicted RBP30.36■■■□□ 2.45
SMARCC1-203ENST00000454240 ISM2Q6H9L7 571 aa30.36■■■□□ 2.45
SMARCC1-203ENST00000454240 FUT10Q6P4F1 479 aa30.36■■■□□ 2.45
SMARCC1-203ENST00000454240 TMC7Q7Z402 723 aa30.36■■■□□ 2.45
SMARCC1-203ENST00000454240 NT5DC4Q86YG4 428 aa30.36■■■□□ 2.45
SMARCC1-203ENST00000454240 GPT2Q8TD30 523 aa30.36■■■□□ 2.45
SMARCC1-203ENST00000454240 MICAL1Q8TDZ2 1067 aa30.36■■■□□ 2.45
SMARCC1-203ENST00000454240 GPR62Q9BZJ7 368 aa30.36■■■□□ 2.45
SMARCC1-203ENST00000454240 PODXLO00592 558 aa30.35■■■□□ 2.45
SMARCC1-203ENST00000454240 CALUO43852 315 aaPredicted RBP30.35■■■□□ 2.45
SMARCC1-203ENST00000454240 B3GAT3O94766 335 aa30.35■■■□□ 2.45
SMARCC1-203ENST00000454240 SOD2P04179 222 aa30.35■■■□□ 2.45
SMARCC1-203ENST00000454240 CTSAP10619 480 aa30.35■■■□□ 2.45
SMARCC1-203ENST00000454240 BMP6P22004 513 aa30.35■■■□□ 2.45
SMARCC1-203ENST00000454240 MORC3Q14149 939 aa30.35■■■□□ 2.45
SMARCC1-203ENST00000454240 MYBPC2Q14324 1141 aa30.35■■■□□ 2.45
SMARCC1-203ENST00000454240 SNRNP35Q16560 246 aaKnown RBP30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms