RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 TNFSF13BQ9Y275 285 aa17.11■□□□□ 0.33
SNX17-204ENST00000453453 USP20Q9Y2K6 914 aa17.11■□□□□ 0.33
SNX17-204ENST00000453453 GOLGA8IPA6NC78 632 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 ZNF233A6NK53 670 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 GOLGA8JA6NMD2 632 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 B4GALT5O43286 388 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 CAND2O75155 1236 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 SGPL1O95470 568 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 BFSP1Q12934 665 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 SNX17Q15036 470 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 MEA1Q16626 185 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 TSR1Q2NL82 804 aaKnown RBP17.1■□□□□ 0.33
SNX17-204ENST00000453453 MIIPQ5JXC2 388 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 ZBTB33Q86T24 672 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 CCDC170Q8IYT3 715 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 U2AF1L4Q8WU68 220 aaKnown RBP17.1■□□□□ 0.33
SNX17-204ENST00000453453 ZBTB45Q96K62 511 aaPredicted RBP17.1■□□□□ 0.33
SNX17-204ENST00000453453 FBXL18Q96ME1 805 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 ADPGKQ9BRR6 497 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 FAM213AQ9BRX8 229 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 CRACR2AQ9BSW2 395 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 NUP58Q9BVL2 599 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 CRISPLD2Q9H0B8 497 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 TRMT13Q9NUP7 481 aaKnown RBP17.1■□□□□ 0.33
SNX17-204ENST00000453453 KRT86O43790 486 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 TSPAN1O60635 241 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 CSDE1O75534 798 aaKnown RBP17.1■□□□□ 0.33
SNX17-204ENST00000453453 AFPP02771 609 aaKnown RBP17.1■□□□□ 0.33
SNX17-204ENST00000453453 HARSP12081 509 aaKnown RBP17.1■□□□□ 0.33
SNX17-204ENST00000453453 CYLC1P35663 651 aaPredicted RBP17.1■□□□□ 0.33
SNX17-204ENST00000453453 THPOP40225 353 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 CDK17Q00537 523 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 MCL1Q07820 350 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 AMHR2Q16671 573 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 TSGA10Q9BZW7 698 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 CAPN11Q9UMQ6 739 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 CDY2AQ9Y6F7 541 aa17.1■□□□□ 0.33
SNX17-204ENST00000453453 A0A0U1RQJ8 604 aa17.09■□□□□ 0.33
SNX17-204ENST00000453453 OGTO15294 1046 aa17.09■□□□□ 0.33
SNX17-204ENST00000453453 IQCF3P0C7M6 154 aa17.09■□□□□ 0.33
SNX17-204ENST00000453453 MCF2P10911 925 aa17.09■□□□□ 0.33
SNX17-204ENST00000453453 PROZP22891 400 aa17.09■□□□□ 0.33
SNX17-204ENST00000453453 AXLP30530 894 aa17.09■□□□□ 0.33
SNX17-204ENST00000453453 VAMP7P51809 220 aa17.09■□□□□ 0.33
SNX17-204ENST00000453453 GTF2A1P52655 376 aaPredicted RBP17.09■□□□□ 0.33
SNX17-204ENST00000453453 KCNH2Q12809 1159 aa17.09■□□□□ 0.33
SNX17-204ENST00000453453 KYAT1Q16773 422 aa17.09■□□□□ 0.33
SNX17-204ENST00000453453 TADA2BQ86TJ2 420 aa17.09■□□□□ 0.33
SNX17-204ENST00000453453 CBWD2Q8IUF1 395 aa17.09■□□□□ 0.33
SNX17-204ENST00000453453 CCDC155Q8N6L0 562 aa17.09■□□□□ 0.33
SNX17-204ENST00000453453 FAM76AQ8TAV0 307 aa17.09■□□□□ 0.33
SNX17-204ENST00000453453 ATRIPQ8WXE1 791 aa17.09■□□□□ 0.33
SNX17-204ENST00000453453 BORCS6Q96GS4 357 aa17.09■□□□□ 0.33
SNX17-204ENST00000453453 PCMTD1Q96MG8 357 aaPredicted RBP17.09■□□□□ 0.33
SNX17-204ENST00000453453 CDHR5Q9HBB8 845 aa17.09■□□□□ 0.33
SNX17-204ENST00000453453 GEMIN8Q9NWZ8 242 aaKnown RBP17.09■□□□□ 0.33
SNX17-204ENST00000453453 REXO2Q9Y3B8 237 aaKnown RBP17.09■□□□□ 0.33
SNX17-204ENST00000453453 JRKLQ9Y4A0 524 aa17.09■□□□□ 0.33
SNX17-204ENST00000453453 MROH7Q68CQ1 1323 aa17.09■□□□□ 0.33
SNX17-204ENST00000453453 TTLL13PA6NNM8 815 aa17.08■□□□□ 0.32
SNX17-204ENST00000453453 GOLGA8KD6RF30 607 aa17.08■□□□□ 0.32
SNX17-204ENST00000453453 CTSHP09668 335 aa17.08■□□□□ 0.32
SNX17-204ENST00000453453 ARF4P18085 180 aaPredicted RBP17.08■□□□□ 0.32
SNX17-204ENST00000453453 ENPEPQ07075 957 aa17.08■□□□□ 0.32
SNX17-204ENST00000453453 SWT1Q5T5J6 900 aaKnown RBP17.08■□□□□ 0.32
SNX17-204ENST00000453453 NOTUMQ6P988 496 aa17.08■□□□□ 0.32
SNX17-204ENST00000453453 SPATS2Q86XZ4 545 aaKnown RBP17.08■□□□□ 0.32
SNX17-204ENST00000453453 MMGT1Q8N4V1 131 aa17.08■□□□□ 0.32
SNX17-204ENST00000453453 ANKLE1Q8NAG6 615 aa17.08■□□□□ 0.32
SNX17-204ENST00000453453 TMC2Q8TDI7 906 aa17.08■□□□□ 0.32
SNX17-204ENST00000453453 SLC35C1Q96A29 364 aa17.08■□□□□ 0.32
SNX17-204ENST00000453453 CPB2Q96IY4 423 aa17.08■□□□□ 0.32
SNX17-204ENST00000453453 SENP6Q9GZR1 1112 aaPredicted RBP17.08■□□□□ 0.32
SNX17-204ENST00000453453 PDZD7Q9H5P4 517 aa17.08■□□□□ 0.32
SNX17-204ENST00000453453 PTPRHQ9HD43 1115 aa17.08■□□□□ 0.32
SNX17-204ENST00000453453 ZNHIT6Q9NWK9 470 aaKnown RBP17.08■□□□□ 0.32
SNX17-204ENST00000453453 LUC7L2Q9Y383 392 aaKnown RBP17.08■□□□□ 0.32
SNX17-204ENST00000453453 TULP1O00294 542 aaPredicted RBP17.07■□□□□ 0.32
SNX17-204ENST00000453453 TLR3O15455 904 aaKnown RBP17.07■□□□□ 0.32
SNX17-204ENST00000453453 B4GALT4O60513 344 aa17.07■□□□□ 0.32
SNX17-204ENST00000453453 ADRB2P07550 413 aa17.07■□□□□ 0.32
SNX17-204ENST00000453453 PRLRP16471 622 aa17.07■□□□□ 0.32
SNX17-204ENST00000453453 FGFR4P22455 802 aa17.07■□□□□ 0.32
SNX17-204ENST00000453453 TNFRSF8P28908 595 aa17.07■□□□□ 0.32
SNX17-204ENST00000453453 ACOT2P49753 483 aa17.07■□□□□ 0.32
SNX17-204ENST00000453453 CYP24A1Q07973 514 aa17.07■□□□□ 0.32
SNX17-204ENST00000453453 DCAF4L1Q3SXM0 396 aa17.07■□□□□ 0.32
SNX17-204ENST00000453453 CCNI2Q6ZMN8 369 aaPredicted RBP17.07■□□□□ 0.32
SNX17-204ENST00000453453 ZSWIM2Q8NEG5 633 aa17.07■□□□□ 0.32
SNX17-204ENST00000453453 MFSD14AQ96MC6 490 aa17.07■□□□□ 0.32
SNX17-204ENST00000453453 ERGIC2Q96RQ1 377 aa17.07■□□□□ 0.32
SNX17-204ENST00000453453 TMEM106CQ9BVX2 250 aa17.07■□□□□ 0.32
SNX17-204ENST00000453453 HAPLN2Q9GZV7 340 aa17.07■□□□□ 0.32
SNX17-204ENST00000453453 TRPV6Q9H1D0 765 aa17.07■□□□□ 0.32
SNX17-204ENST00000453453 CDT1Q9H211 546 aa17.07■□□□□ 0.32
SNX17-204ENST00000453453 RBAKQ9NYW8 714 aaPredicted RBP17.07■□□□□ 0.32
SNX17-204ENST00000453453 HTTP42858 3142 aa17.07■□□□□ 0.32
SNX17-204ENST00000453453 A0A1B0GUA9 196 aa17.07■□□□□ 0.32
SNX17-204ENST00000453453 OPA1O60313 960 aa17.07■□□□□ 0.32
SNX17-204ENST00000453453 USP8P40818 1118 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms