RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 TMEM173Q86WV6 379 aaPredicted RBP9.65□□□□□ -0.86
COL8A1-203ENST00000452013 NT5DC4Q86YG4 428 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 NELFCDQ8IXH7 590 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 GPR65Q8IYL9 337 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 GPD1LQ8N335 351 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 GLIS3Q8NEA6 775 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 BEST2Q8NFU1 509 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 CACTINQ8WUQ7 758 aaKnown RBP9.65□□□□□ -0.86
COL8A1-203ENST00000452013 HLA-CQ95604 372 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 SMARCE1Q969G3 411 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 KIF12Q96FN5 646 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 ZMAT2Q96NC0 199 aaKnown RBP9.65□□□□□ -0.86
COL8A1-203ENST00000452013 GSDMAQ96QA5 445 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 FAM213AQ9BRX8 229 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 EMILIN2Q9BXX0 1053 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 CXCL16Q9H2A7 254 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 PCIF1Q9H4Z3 704 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 IGFLR1Q9H665 355 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 MRPL17Q9NRX2 175 aaKnown RBP9.65□□□□□ -0.86
COL8A1-203ENST00000452013 SF3B1O75533 1304 aaKnown RBP eCLIP9.64□□□□□ -0.87
COL8A1-203ENST00000452013 SIP14410 1827 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 TISP43B9A030 160 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 TMEM189-UBE2V1I3L0A0 370 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 PDXKO00764 312 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 TGFB1I1O43294 461 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 CALUO43852 315 aaPredicted RBP9.64□□□□□ -0.87
COL8A1-203ENST00000452013 FAM189A1O60320 539 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 CSPG5O95196 566 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 URODP06132 367 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 SRGAP2BP0DMP2 458 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 HOXD13P35453 343 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 NRIP1P48552 1158 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 CLCNKBP51801 687 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 HYAL1Q12794 435 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 ADAM15Q13444 863 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 PNOCQ13519 176 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 UPP1Q16831 310 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 ZBTB41Q5SVQ8 909 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 FUT10Q6P4F1 479 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 PDXDC1Q6P996 788 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 CRELD2Q6UXH1 353 aaPredicted RBP9.64□□□□□ -0.87
COL8A1-203ENST00000452013 EP400NLQ6ZTU2 488 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 RBM23Q86U06 439 aaKnown RBP9.64□□□□□ -0.87
COL8A1-203ENST00000452013 PPFIBP1Q86W92 1011 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 C12orf56Q8IXR9 622 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 XXYLT1Q8NBI6 393 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 NOC3LQ8WTT2 800 aaKnown RBP9.64□□□□□ -0.87
COL8A1-203ENST00000452013 BCL7CQ8WUZ0 217 aaPredicted RBP9.64□□□□□ -0.87
COL8A1-203ENST00000452013 ATXN2LQ8WWM7 1075 aaKnown RBP9.64□□□□□ -0.87
COL8A1-203ENST00000452013 RABGGTAQ92696 567 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 PABPC5Q96DU9 382 aaKnown RBP9.64□□□□□ -0.87
COL8A1-203ENST00000452013 CBWD1Q9BRT8 395 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 HERC2P3Q9BVR0 1158 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 ZBP1Q9H171 429 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 IKZF4Q9H2S9 585 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.64□□□□□ -0.87
COL8A1-203ENST00000452013 AGPAT3Q9NRZ7 376 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 CHST7Q9NS84 486 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 MARCH5Q9NX47 278 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 HSPBP1Q9NZL4 362 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 C2CD2Q9Y426 696 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 NUB1Q9Y5A7 615 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 IRAK3Q9Y616 596 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 TTC3P53804 2025 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 EVPLQ92817 2033 aa9.64□□□□□ -0.87
COL8A1-203ENST00000452013 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.63□□□□□ -0.87
COL8A1-203ENST00000452013 GOLGA8IPA6NC78 632 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 C2orf71A6NGG8 1288 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 GOLGA8JA6NMD2 632 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 PODXLO00592 558 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 PER2O15055 1255 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 CLIC2O15247 247 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 EXOC3O60645 756 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 EFEMP2O95967 443 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 KLRC2P26717 231 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 GLUD2P49448 558 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 MRPS5P82675 430 aaKnown RBP9.63□□□□□ -0.87
COL8A1-203ENST00000452013 CREMQ03060 361 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 SPAG1Q07617 926 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 MYBPC2Q14324 1141 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 TMEM132DQ14C87 1099 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 DUSP6Q16828 381 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 ZNF658Q5TYW1 1059 aaPredicted RBP9.63□□□□□ -0.87
COL8A1-203ENST00000452013 FAM171A1Q5VUB5 890 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 KIAA0319Q5VV43 1072 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 SPATA1Q5VX52 437 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 JADE1Q6IE81 842 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 TAS1R1Q7RTX1 841 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 BRSK2Q8IWQ3 736 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 GUF1Q8N442 669 aaKnown RBP9.63□□□□□ -0.87
COL8A1-203ENST00000452013 EFHBQ8N7U6 833 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 KIAA0895Q8NCT3 520 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 C18orf25Q96B23 403 aaPredicted RBP9.63□□□□□ -0.87
COL8A1-203ENST00000452013 SAAL1Q96ER3 474 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 PAAF1Q9BRP4 392 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 TTPALQ9BTX7 342 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 GPR62Q9BZJ7 368 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 RXFP1Q9HBX9 757 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 CLDND1Q9NY35 253 aa9.63□□□□□ -0.87
COL8A1-203ENST00000452013 RBAKQ9NYW8 714 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms