RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 C3orf58Q8NDZ4 430 aa11.21□□□□□ -0.61
LINC01004-202ENST00000450686 SLC7A14Q8TBB6 771 aa11.21□□□□□ -0.61
LINC01004-202ENST00000450686 TTPALQ9BTX7 342 aa11.21□□□□□ -0.61
LINC01004-202ENST00000450686 NFKBIZQ9BYH8 718 aa11.21□□□□□ -0.61
LINC01004-202ENST00000450686 PLEKHA4Q9H4M7 779 aa11.21□□□□□ -0.61
LINC01004-202ENST00000450686 PRMT7Q9NVM4 692 aaPredicted RBP11.21□□□□□ -0.61
LINC01004-202ENST00000450686 ZDHHC7Q9NXF8 308 aa11.21□□□□□ -0.61
LINC01004-202ENST00000450686 FNIP2Q9P278 1114 aa11.21□□□□□ -0.61
LINC01004-202ENST00000450686 WNT16Q9UBV4 365 aa11.21□□□□□ -0.61
LINC01004-202ENST00000450686 MTF2Q9Y483 593 aaPredicted RBP11.21□□□□□ -0.61
LINC01004-202ENST00000450686 FANCMQ8IYD8 2048 aa11.21□□□□□ -0.62
LINC01004-202ENST00000450686 ARHGEF35A5YM69 484 aa11.2□□□□□ -0.62
LINC01004-202ENST00000450686 N4BP3O15049 544 aa11.2□□□□□ -0.62
LINC01004-202ENST00000450686 TKTP29401 623 aaKnown RBP11.2□□□□□ -0.62
LINC01004-202ENST00000450686 OR1D2P34982 312 aa11.2□□□□□ -0.62
LINC01004-202ENST00000450686 BRCC3P46736 316 aa11.2□□□□□ -0.62
LINC01004-202ENST00000450686 CLCNKBP51801 687 aa11.2□□□□□ -0.62
LINC01004-202ENST00000450686 NEK4P51957 841 aa11.2□□□□□ -0.62
LINC01004-202ENST00000450686 OSTNP61366 133 aa11.2□□□□□ -0.62
LINC01004-202ENST00000450686 SOX4Q06945 474 aaPredicted RBP11.2□□□□□ -0.62
LINC01004-202ENST00000450686 TRIM29Q14134 588 aa11.2□□□□□ -0.62
LINC01004-202ENST00000450686 PCBP1Q15365 356 aaKnown RBP eCLIP11.2□□□□□ -0.62
LINC01004-202ENST00000450686 LIN9Q5TKA1 542 aa11.2□□□□□ -0.62
LINC01004-202ENST00000450686 ELMSAN1Q6PJG2 1045 aa11.2□□□□□ -0.62
LINC01004-202ENST00000450686 DCLRE1AQ6PJP8 1040 aa11.2□□□□□ -0.62
LINC01004-202ENST00000450686 CD300LGQ6UXG3 332 aa11.2□□□□□ -0.62
LINC01004-202ENST00000450686 CCDC83Q8IWF9 413 aa11.2□□□□□ -0.62
LINC01004-202ENST00000450686 DCLK2Q8N568 766 aa11.2□□□□□ -0.62
LINC01004-202ENST00000450686 DEPTORQ8TB45 409 aa11.2□□□□□ -0.62
LINC01004-202ENST00000450686 PIK3R5Q8WYR1 880 aa11.2□□□□□ -0.62
LINC01004-202ENST00000450686 FGF13Q92913 245 aa11.2□□□□□ -0.62
LINC01004-202ENST00000450686 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.2□□□□□ -0.62
LINC01004-202ENST00000450686 DLGAP2Q9P1A6 1054 aa11.2□□□□□ -0.62
LINC01004-202ENST00000450686 PATJQ8NI35 1801 aa11.2□□□□□ -0.62
LINC01004-202ENST00000450686 PP2D1A8MPX8 630 aa11.19□□□□□ -0.62
LINC01004-202ENST00000450686 THP07101 528 aa11.19□□□□□ -0.62
LINC01004-202ENST00000450686 OR52Z1P0C646 297 aa11.19□□□□□ -0.62
LINC01004-202ENST00000450686 ANKRD1Q15327 319 aa11.19□□□□□ -0.62
LINC01004-202ENST00000450686 FAM187BQ17R55 369 aa11.19□□□□□ -0.62
LINC01004-202ENST00000450686 SLC5A9Q2M3M2 681 aa11.19□□□□□ -0.62
LINC01004-202ENST00000450686 AXDND1Q5T1B0 1012 aaPredicted RBP11.19□□□□□ -0.62
LINC01004-202ENST00000450686 KIAA2013Q8IYS2 634 aa11.19□□□□□ -0.62
LINC01004-202ENST00000450686 MCPH1Q8NEM0 835 aa11.19□□□□□ -0.62
LINC01004-202ENST00000450686 HDAC7Q8WUI4 952 aa11.19□□□□□ -0.62
LINC01004-202ENST00000450686 RHOBTB2Q9BYZ6 727 aa11.19□□□□□ -0.62
LINC01004-202ENST00000450686 PLA2G2FQ9BZM2 168 aa11.19□□□□□ -0.62
LINC01004-202ENST00000450686 TUFT1Q9NNX1 390 aa11.19□□□□□ -0.62
LINC01004-202ENST00000450686 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.19□□□□□ -0.62
LINC01004-202ENST00000450686 DPP7Q9UHL4 492 aa11.19□□□□□ -0.62
LINC01004-202ENST00000450686 CDH7Q9ULB5 785 aa11.19□□□□□ -0.62
LINC01004-202ENST00000450686 SIT1Q9Y3P8 196 aa11.19□□□□□ -0.62
LINC01004-202ENST00000450686 CDY1Q9Y6F8 540 aa11.19□□□□□ -0.62
LINC01004-202ENST00000450686 MEFVO15553 781 aaPredicted RBP11.18□□□□□ -0.62
LINC01004-202ENST00000450686 PAPLNO95428 1278 aa11.18□□□□□ -0.62
LINC01004-202ENST00000450686 SP9P0CG40 484 aa11.18□□□□□ -0.62
LINC01004-202ENST00000450686 HARSP12081 509 aaKnown RBP11.18□□□□□ -0.62
LINC01004-202ENST00000450686 CEBPBP17676 345 aa11.18□□□□□ -0.62
LINC01004-202ENST00000450686 CYP11B2P19099 503 aa11.18□□□□□ -0.62
LINC01004-202ENST00000450686 CCT6AP40227 531 aaKnown RBP11.18□□□□□ -0.62
LINC01004-202ENST00000450686 ID4P47928 161 aa11.18□□□□□ -0.62
LINC01004-202ENST00000450686 ARPP19P56211 112 aa11.18□□□□□ -0.62
LINC01004-202ENST00000450686 ANAPC15P60006 121 aa11.18□□□□□ -0.62
LINC01004-202ENST00000450686 UBXN2BQ14CS0 331 aa11.18□□□□□ -0.62
LINC01004-202ENST00000450686 MAPK6Q16659 721 aa11.18□□□□□ -0.62
LINC01004-202ENST00000450686 SEZ6Q53EL9 994 aa11.18□□□□□ -0.62
LINC01004-202ENST00000450686 ATF7IP2Q5U623 682 aa11.18□□□□□ -0.62
LINC01004-202ENST00000450686 CYP26C1Q6V0L0 522 aa11.18□□□□□ -0.62
LINC01004-202ENST00000450686 NPAS3Q8IXF0 933 aa11.18□□□□□ -0.62
LINC01004-202ENST00000450686 MAML2Q8IZL2 1156 aaPredicted RBP11.18□□□□□ -0.62
LINC01004-202ENST00000450686 PJA1Q8NG27 643 aa11.18□□□□□ -0.62
LINC01004-202ENST00000450686 MCRS1Q96EZ8 462 aa11.18□□□□□ -0.62
LINC01004-202ENST00000450686 PRIMPOLQ96LW4 560 aa11.18□□□□□ -0.62
LINC01004-202ENST00000450686 PPP1R10Q96QC0 940 aaKnown RBP11.18□□□□□ -0.62
LINC01004-202ENST00000450686 NACC1Q96RE7 527 aa11.18□□□□□ -0.62
LINC01004-202ENST00000450686 HINFPQ9BQA5 517 aa11.18□□□□□ -0.62
LINC01004-202ENST00000450686 POLR3CQ9BUI4 534 aaPredicted RBP11.18□□□□□ -0.62
LINC01004-202ENST00000450686 BHMT2Q9H2M3 363 aa11.18□□□□□ -0.62
LINC01004-202ENST00000450686 SLC2A4RGQ9NR83 387 aa11.18□□□□□ -0.62
LINC01004-202ENST00000450686 DNMT3BQ9UBC3 853 aaKnown RBP11.18□□□□□ -0.62
LINC01004-202ENST00000450686 CITO14578 2027 aa11.18□□□□□ -0.62
LINC01004-202ENST00000450686 ZMYM2Q9UBW7 1377 aa11.17□□□□□ -0.62
LINC01004-202ENST00000450686 ACKR2O00590 384 aa11.17□□□□□ -0.62
LINC01004-202ENST00000450686 B3GAT3O94766 335 aa11.17□□□□□ -0.62
LINC01004-202ENST00000450686 LMNAP02545 664 aaKnown RBP11.17□□□□□ -0.62
LINC01004-202ENST00000450686 FGFR3P22607 806 aa11.17□□□□□ -0.62
LINC01004-202ENST00000450686 CDC25AP30304 524 aa11.17□□□□□ -0.62
LINC01004-202ENST00000450686 NAMPTP43490 491 aa11.17□□□□□ -0.62
LINC01004-202ENST00000450686 CREMQ03060 361 aa11.17□□□□□ -0.62
LINC01004-202ENST00000450686 PABPC1LQ4VXU2 614 aaKnown RBP11.17□□□□□ -0.62
LINC01004-202ENST00000450686 TTC38Q5R3I4 469 aa11.17□□□□□ -0.62
LINC01004-202ENST00000450686 TSSK4Q6SA08 328 aa11.17□□□□□ -0.62
LINC01004-202ENST00000450686 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.17□□□□□ -0.62
LINC01004-202ENST00000450686 TAS1R3Q7RTX0 852 aa11.17□□□□□ -0.62
LINC01004-202ENST00000450686 C1orf210Q8IVY1 113 aa11.17□□□□□ -0.62
LINC01004-202ENST00000450686 C18orf25Q96B23 403 aaPredicted RBP11.17□□□□□ -0.62
LINC01004-202ENST00000450686 RMDN1Q96DB5 314 aa11.17□□□□□ -0.62
LINC01004-202ENST00000450686 TCEAL4Q96EI5 215 aa11.17□□□□□ -0.62
LINC01004-202ENST00000450686 C8orf76Q96K31 380 aa11.17□□□□□ -0.62
LINC01004-202ENST00000450686 ZMAT2Q96NC0 199 aaKnown RBP11.17□□□□□ -0.62
LINC01004-202ENST00000450686 C2orf40Q9H1Z8 148 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms