RNA–Protein interactions for RNA: ENST00000449504.5

HDLBP-222, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-222	ENST00000449504	ZNF197	O14709	1029 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	DCLK1	O15075	740 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	MSH4	O15457	936 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	TSPAN1	O60635	241 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	NPTXR	O95502	500 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	MYL4	P12829	197 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	HOXA6	P31267	233 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	MCM5	P33992	734 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	CCR2	P41597	374 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	NPEPPS	P55786	919 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	ARPP19	P56211	112 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	LAMTOR4	Q0VGL1	99 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	MMRN1	Q13201	1228 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	ELF2	Q15723	593 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	PLK5	Q496M5	336 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	PRSS36	Q5K4E3	855 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	CYP4A22	Q5TCH4	519 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	PKN3	Q6P5Z2	889 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	PDXDC1	Q6P996	788 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	PDZD4	Q76G19	769 aa	Predicted RBP	8	□□□□□ -1.13
HDLBP-222	ENST00000449504	PROSER1	Q86XN7	944 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	MFSD6L	Q8IWD5	586 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	HS6ST3	Q8IZP7	471 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	8	□□□□□ -1.13
HDLBP-222	ENST00000449504	DEPDC1B	Q8WUY9	529 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	PSPC1	Q8WXF1	523 aa	Known RBP	8	□□□□□ -1.13
HDLBP-222	ENST00000449504	SLC7A3	Q8WY07	619 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	TMEM87B	Q96K49	555 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	SLITRK6	Q9H5Y7	841 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	C8orf33	Q9H7E9	229 aa	Predicted RBP	8	□□□□□ -1.13
HDLBP-222	ENST00000449504	BARHL2	Q9NY43	387 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	SLC8A2	Q9UPR5	921 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	PCDHB13	Q9Y5F0	798 aa		8	□□□□□ -1.13
HDLBP-222	ENST00000449504	CNOT1	A5YKK6	2376 aa	Known RBP	8	□□□□□ -1.13
HDLBP-222	ENST00000449504	SETX	Q7Z333	2677 aa	Known RBP	7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	SPAAR	A0A1B0GVQ0	90 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	INO80B-WBP1	J3KQ70	363 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	KHNYN	O15037	678 aa	Known RBP	7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	RHOBTB1	O94844	696 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	GBP1	P32455	592 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	ELAVL2	Q12926	359 aa	Known RBP	7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	TUSC3	Q13454	348 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	C1orf228	Q6PIY5	440 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	ANO5	Q75V66	913 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	TEX2	Q8IWB9	1127 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	REXO1	Q8N1G1	1221 aa	Known RBP	7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	CHCHD4	Q8N4Q1	142 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	EXOC6	Q8TAG9	804 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	ADAM32	Q8TC27	787 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	SLC5A5	Q92911	643 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	LENG9	Q96B70	501 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	MSANTD3	Q96H12	275 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	LRIG1	Q96JA1	1093 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	CCDC136	Q96JN2	1154 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	ZFYVE19	Q96K21	471 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	ZC3H10	Q96K80	434 aa	Known RBP	7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	CEP170P1	Q96L14	293 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	RIT2	Q99578	217 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	DUSP15	Q9H1R2	295 aa	Predicted RBP	7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	SLC32A1	Q9H598	525 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	CYP4F11	Q9HBI6	524 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	C6orf50	Q9HD87	102 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	AVEN	Q9NQS1	362 aa	Predicted RBP	7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	POLR3B	Q9NW08	1133 aa	Predicted RBP	7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	SNTG2	Q9NY99	539 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	GTSE1	Q9NYZ3	720 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	INVS	Q9Y283	1065 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	ZZEF1	O43149	2961 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	NCAN	O14594	1321 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	MYH9	P35579	1960 aa	Known RBP	7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	CEP295	Q9C0D2	2601 aa		7.99	□□□□□ -1.13
HDLBP-222	ENST00000449504	GREB1	Q4ZG55	1949 aa		7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	BCLAF3	A2AJT9	711 aa	Known RBP	7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	MYBPHL	A2RUH7	354 aa		7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	PATE3	B3GLJ2	98 aa		7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	hCG_1984214	I3L0E3	225 aa		7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504		I3L4J1	428 aa		7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	ARNTL	O00327	626 aa		7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	CDX4	O14627	284 aa	Predicted RBP	7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	CHAD	O15335	359 aa		7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	AKAP3	O75969	853 aa		7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	IGFBP6	P24592	240 aa	Predicted RBP	7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	AXL	P30530	894 aa		7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	CTH	P32929	405 aa		7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	CIITA	P33076	1130 aa		7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	RDX	P35241	583 aa	Known RBP	7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	LIFR	P42702	1097 aa		7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	MLLT6	P55198	1093 aa	Predicted RBP	7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	SIM1	P81133	766 aa	Predicted RBP	7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	SPIRE1	Q08AE8	756 aa		7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	SCAP	Q12770	1279 aa		7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	CCIN	Q13939	588 aa		7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	TEAD2	Q15562	447 aa		7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	RTN1	Q16799	776 aa		7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	IQCE	Q6IPM2	695 aa		7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	RTL10	Q7L3V2	364 aa		7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	FERMT3	Q86UX7	667 aa		7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	CHD1L	Q86WJ1	897 aa		7.98	□□□□□ -1.13
HDLBP-222	ENST00000449504	RALGPS2	Q86X27	583 aa	Predicted RBP	7.98	□□□□□ -1.13

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms